Array 1 17917-18217 **** Predicted by CRISPRDetect 2.4 *** >NZ_JPDJ01000048.1 Lysinibacillus sphaericus strain 2297 NODE_177, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 17917 33 100.0 35 ................................. GTTACGGCCATTAATCTTTGTGCTAAGCTCAGCAG 17985 33 100.0 34 ................................. TGATGTAGTAACTGGTGAGTCATAATGATAATGG 18052 33 100.0 33 ................................. TCTTCTTTCCAACTCTTCAACGAACTGTTTGAA 18118 33 100.0 34 ................................. CAAAATGCTATCTCCAAAATGAGGTAGCGTTATT 18185 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= =================================== ================== 5 33 100.0 34 GTCACTCTCTGTATGGAGAGTGTGGATTGAAAT # Left flank : ATGCAGAAGGACATGGAGACAGCCATGAACACGAAGCATCAGCCTCGGATGAAGCGACGCTACAATATGTGCAAATTAGCACTGCACAAGTGGTAAAAGAGGACGCCAAAGAAGTACAGTCATCGAATGCAACAACAAAAGAACAACAAACAGCAGCAACAGATGACACAACATCCAACACAGTATGGATGATTGCCATCCTAATTGTCCTAGCAGCTATTTTCGCGCTTGTTTTCGTGAAGAGAAAAAAATAAAGCAACTTATAGGAACCAGCAATAATCGAGTAACTTCGGTGATTGCTGGTTTTTTTAAAAGGAAATGATTGCTATAATAAAGTAAAGTGCGAATAGTAAGCGAACATGATTTCATAGCATGATTCGCACCAGTAATATTGAAGAAATTGCTAGTTAGATAGATAAGTATGGGTTATTAATACCTGTTTTTTTATTTATAAATATTAATATATAGGATATTTTGTTGAGAATCTATTTAATTTAGCT # Right flank : TCGAAAAGACGGCTGCCCAAGTACTTCAGATGATTGTCACTCTCTACAGCTATGAATTGAAATTAAATGGTGGGTTTTTTTAATCATCAGCATTTCTTATGTATGTAGAAAAAAGATTAACCGTATTTTTTATAGGTACTTAGACATCTGATCTAAGGTTTGGTATAATTGTTTAAATATTACAATTTTATATACGTGAGAAAGGTGGGTTAGATGACTACTTTAGATATTATTGCTCATATTCGATCGAGTGATGGTGCAGAGCAACGGTTGGTGGATCATTTAAAAGAGGTTCAAGTTTTGACAGAAAGAATTGGACAGAAAATTGGTCTTTCACATGTCACTGGCCTTGCAGGAATGTTACATGATATGGGGAAGTTTAGCGAAGCGTTTCAGGAATATATTCGCGAAGCTTTCTCTAATCCCAATAATCCTCCAAAAAGAGGGAGTGTGGATCATTCTACAGCAGGAGGGAAATTTTTACTGGAGCATTTTCATCA # Questionable array : NO Score: 9.06 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCTCTGTATGGAGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.58%AT] # Reference repeat match prediction: F [matched GTCACTCTCTGTATGGAGAGTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [86.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 2602-3975 **** Predicted by CRISPRDetect 2.4 *** >NZ_JPDJ01000049.1 Lysinibacillus sphaericus strain 2297 NODE_178, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 2602 33 100.0 35 ................................. ATCCAGTACCGAGTGTTGATGTGAAAATAAATAAG 2670 33 100.0 35 ................................. ATATAAGTTTGACCTTTTAGATACATGCGTCATAA 2738 33 100.0 34 ................................. ATCTATATAGAAGGAAAAATAATTTTTACCTCTC 2805 33 100.0 35 ................................. TTTAGGTTCCGGCTTGTAATTAGTGATCTTTTGCA 2873 33 100.0 33 ................................. AAGCCCGCAACCTGTGGTCACGACCCCATTTTG 2939 33 100.0 35 ................................. GTTATTTCCTGTTGTTGTTCCTGTGGTTTCAACGC 3007 33 100.0 33 ................................. ATTAGGTTTTAAACGAATAGTTGCATTTAAACC 3073 33 100.0 34 ................................. TATCAGCACATCTTTACCCATCATTTGTGCAATA 3140 33 100.0 34 ................................. TCTTCTTCTTTTTTATTGCGATTAAACATGATTT 3207 33 100.0 33 ................................. ATTTATAACTCCATAGCTTATTTATGGAATATG 3273 33 100.0 33 ................................. TTTGCTAATGATTCCTAAGCGTTCCTTTATTGC 3339 33 100.0 35 ................................. ATTTGAACTATCAAAGTATTTCAGAAGGAATGTCT 3407 33 97.0 35 ........................A........ ATCGATATAGGTCTCTTTTGACTCAACCGCCTGAT 3475 33 97.0 34 ........A........................ CATAAAGGTTTGATTACTTGACCGTAAAAGGTAG 3542 33 100.0 33 ................................. ATCTTACGGCGAATATATTCGATAGTTGCTACC 3608 33 100.0 34 ................................. GTCACATACTGGACAATACGCAGTAATACCAATT 3675 33 100.0 34 ................................. ATTACGTTCTGTATATGTTGTTGTATTTAGTTCC 3742 33 100.0 34 ................................. GACTGCTTTGCGTAAGTCCTCGCTTAGTCCAGCG 3809 33 100.0 34 ................................. CATGAGATATTTCACGCCTAATGATTGCTCTGCA 3876 33 100.0 34 ................................. ATTAGGTTTTATGGTCAGTTTAGTTGTGAAAAAC 3943 33 90.9 0 ..............A......A..T........ | ========== ====== ====== ====== ================================= =================================== ================== 21 33 99.3 34 GTCACTCTCTGTATGGAGAGTGTGGATTGAAAT # Left flank : GAAGAATATCCACCCTTTCTATGGAAGTGAGGTTTGGTTATGCTAGTATTAGTAACGTACGATGTGGTCACAAAAACGGCTGCTGGTCAAAAACGATTACGCAAAGTAGCAAAAACTTGTGAAAATTATGGCCTCCGTGTTCAAAATTCCGTTTTTGAATGCGTAGTAGACGCAACACAATTTAAGCAACTTCAACTGGAACTTCAGGCAATTATTGATGTAGATTTGGATAGCCTACGCTTTTATCAGCTTGGCAACAACTATAAATCAAAAGTCAAGCACATTGGTGCCAAAGAAACGTTTAATGTGGAGGACACCATAATTTTATAAATATCACCTCGGCGCGGATGCAAAGCAAACATAAAATTCCTAGAGGATCCGCACCTATTTTTAGTAAGAGCTTAATCAAAATTACAATCTTGATGAGTATAAAGAAAGGTCATATATAAATGAATTAGTGAAATTATATTAAAAGTGATAATTTTTAATGAAATTTTGCA # Right flank : TCCCGCTAGTCCCTCTATCACAGTAATACGTTCTGTCATTCTCTATACAACTAAATAGCCATTACAAATAAAATAAAAAGATGAACAGCACTTGGTAAGGTCAGTTGACCAACAATCGCTGTTCATTTTTTATTACCGAAAATCATGGACATTCATGAAAATGTCAAAATTTTTACGTGAACGGATGCAAATTCCAGTAATTTTACACAAAATTGAATAACTACAAGCCTGTTCGGTATATAAATAGGGTACGATCATTTTTAGGCTGAGGAGTGTGTAAATGGCAACACTTGTAGTAAAGAGAAGTATTATGCATCGGTACCAAAGCATTGGGCAGGCAATTGAAGAGGCTATGCCTGGGGATATGATAGAAATTCGAGATGGTATTTATGAGGAAAGCTTGGATATTTCCAAGCGGCTGACATTGTATGGAGTTGGCAATGTTACAATTAAAGGTGGTGTTTTTATTCGCTACCAGACCCATGTAGATATGCGCAATT # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCTCTGTATGGAGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.58%AT] # Reference repeat match prediction: F [matched GTCACTCTCTGTATGGAGAGTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //