Array 1 100122-99571 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH791842.1 Bacillus mycoides strain VDM022 supercont1.6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 100121 29 100.0 36 ............................. AGGTATTATACAGATAGTGAGCGCAAGAGTTTATGT AT [100110] 100054 29 100.0 37 ............................. CCTTAGCATAACCTCTCAAGAACTGCAACTGGTGGTA 99988 29 100.0 35 ............................. TGAAGTTAACGACGAAAATAAAGAACTCGTTAGAA 99924 29 100.0 37 ............................. ACTAAGTGATAAGAGCGCATTGTTTGGGAAGCGCCTT 99858 29 100.0 36 ............................. TTAGTACAAAGCGTTCAAGAAATTTATCAAGGGTAA 99793 29 96.6 35 .......C..................... ATTAAATAATCAGCGCTGACATCAAAAATTTGTGC 99729 29 96.6 36 .......C..................... GCAAGATACAATCGCCTTCCAAATGAGTTGAAAAAG 99664 29 100.0 36 ............................. AGCATTAACATCTTTTGTTTCTTATCAAACTTCAGG 99599 28 86.2 0 ........CG...-..............A | T [99583] ========== ====== ====== ====== ============================= ===================================== ================== 9 29 97.7 36 GTTTTATTTAAACGTAGTGGGATATAAAC # Left flank : AATTACTAAGCTTACTGTGAGTTTAAGGAAAACCTTAACTATGAGAAACACATCAAGATTACCGCATAAGGGAGTCAAAAAGAACGGAAAAAAATATGATTTATTACCATGGATTCAAATTTTAGATTTAGACTATGAATTCAATGAAAATTCAAAGACAGGTTCAGGTGTACTGTTAGATAAAAAAACAGAAAATTTCATTTAATAACCCACGCAACATAAAGAAAAAAGTATTTGGGATTGAAAAAAGCTATGAAGAGCTATTTCTTTAAATTGAATTTTATAATATTTTATAATTTACTAAGATTATTTTATAGTAGCAACTATTTTTGCAGTGTATCTCTTTACTGTAAGTAAATGTTAACCCCCTTGTCTTCCAAGGCTTTAACGGCATTTTTGAAAAAGTTATGAAACAAGACTAACGATTCACTGCAAAACCTATAAGTTAAACACATTAGATTCCTTGCTTCAATGAGGTTTTATTCTACTTTTTATAGGGG # Right flank : GTTTGTAATGAAACCATAGTAATAGAGTCCTAATTAAAAAGGGCTCTATTTCTATGGTTGATACCTTCAAATTTTTTATCTTTCATTAGATCAATTTCACATTCAAGTTCTTTGGTTTCTATATTTAAAAAGTCCATTGTTATTGCAAGAACCTTTCCATCTTTCTCTCTCTTAGATCCCCATAAACGAACAACCCTATTGATTTTACTATCTTCATATATAATTTGAACTGTTCTTAATTCTTCTCCCTCCACAAATTCACGATGTATCCAACACTCTTTAAATTCCAAATTCTCATCAGATTTATGCATGTTATATTTCAACATTACTTCTTCTAATTCTGGAAACACCAAGCCTTTTTTCTCCAAACAAATATACTCAAAATCCCAAAACTCTCTAAAATGATAGATAAGCTCTTTTTGACTTTTCATCATAATTCCCCCACCCCATAAATTTTGAAGCGTTATGTATATTTGATATCTGTTACATGATTAATTTTA # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATTTAAACGTAGTGGGATATAAAC # Alternate repeat : GTTTTATCTAAACGTAGTGGGATATAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.41%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 108348-107939 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH791842.1 Bacillus mycoides strain VDM022 supercont1.6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 108347 29 100.0 37 ............................. TCGTTAGGTACATCATTTACTCGGTGTTCAACCTCGA 108281 29 100.0 36 ............................. ATGATTACGTCACCTTTGTATGTCGGTCTTAACACT 108216 29 100.0 36 ............................. TAACAGTAGGGGGAACGGAATCCGCATTGAGTACGC 108151 29 100.0 37 ............................. TTTTGGATTTTAGGATATCTTGTATTAAAAGCCCCTT 108085 29 96.6 36 .T........................... GTATCCTGTTGTGGGCTTTCTATAGTACTTGTAGTT 108020 29 93.1 23 .T..........................A TATTTTATTATCGTAGCATTAAA Deletion [107969] 107968 29 75.9 0 A........G..........T.A..GT.T | C [107943] ========== ====== ====== ====== ============================= ===================================== ================== 7 29 95.1 34 GGTTTATCTAAACGTAGTGGGATATAAAC # Left flank : GAACAACTAAAGCTAACAGTTTACGTTTCATACTCACCTACCCCTTTGTTTGTTTATCTGTTACTTAATCTTTTTCATTTCTTTATGACCTTTATCTATTAGCTTAGAAGCGGTTATTAATTCATCACTCGCTATTTCTACACTTACTTTATCTCCCATAGATAAACCAGTTTGCATATGCTCTACCCTGCCTTAACATATGTCATTGCTTCATCTACTTCCTTCTGTACAAGATAATACTTTTGGTCATACGTTTCTTTTTTGTACATTTGTTTATTTCTTTAGGTTTTTAGATGTGTTACGTTTATATTGTAGTAATAACTAATTTTGCAGCGCATCTTAATAATTACGTAACATGCTAAATTTCTTGTGATTCATGGGATTAACATAATTTATGAAAATATTTATGAAACAAGACTGGCGATCCGCTGCAAAATTCGCAAACTAGTATCAATTAGATTCCTTGCTGTACAAAGATTCTATCACACTTTTTATGAGGG # Right flank : ATTATGAGTGATCCCCCTAGATGGTTATTGTAATCTAGGGGGACTTTTTCTTTTTTAGAATCAATACAAATATTAACATGGAATATTTTTCATTCTATACTATAATTAAATATGGTTAGGAGGTTACAATAATGTCAAAGGTCTCAAACTCCCTTCGTATTCTTTTATTGCTTTCAAAAAATAGAAAGATGTCCGGGGGGCAATTAGCAAGAATGCTAGAACTGAGTGGAAGAAGTGTTCGCAAGCATATAAATGATTTGTTAATGGCGGGTTTTATGATACATACGATCAGAGGACGAAACGGTGGTTATTTCTTAGAAACAAACCCTCTTTGGAACAGCTTTTTAGAGCAAAAAGAATTAGATAAGTTGACTGAACTAGTCCGTAAGCAACTAACACTTAATCCGTATGATAAAGTTGTCCAACAATTAGAAGAAAAACTAAAACAATTATCAAATCAAAATGACACTGTTATAACATCAAGTTATAGCGTTAACACA # Questionable array : NO Score: 5.91 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:-0.09, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTTATCTAAACGTAGTGGGATATAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //