Array 1 35550-38699 **** Predicted by CRISPRDetect 2.4 *** >NZ_QLMD01000002.1 Aliidiomarina maris strain CGMCC 1.15366 Ga0171587_102, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 35550 28 100.0 32 ............................ TATCGTTGTAAGACCTAAGTCTGATGGTTTTT 35610 28 100.0 32 ............................ TTACCACCGCAGCACCAGAGAAGTGTGGAGTC 35670 28 100.0 32 ............................ ACTGACGCGATTCTTATCAACAAAGAATTAGA 35730 28 100.0 32 ............................ AACCGCTGACCAGTGTCGACTTTAATCATGTG 35790 28 100.0 32 ............................ TAGATAGGTTTCGCCATCTATCACTATTGGAC 35850 28 100.0 32 ............................ AATTTGGCGCGGTCGCTGCGTGAATATAAATG 35910 28 100.0 32 ............................ AAGCTGATGAAGGCATTAGGTATCACGTATGG 35970 28 100.0 32 ............................ CCTGAAGTCTAGGTTGCGAATAGTCGCTACGT 36030 28 100.0 32 ............................ ACAATGGCCAAACAGTCCACCAGTGCCATAAT 36090 28 100.0 32 ............................ ACCTTGGAAACCTTGCTGATTTCCAACATAGC 36150 28 100.0 32 ............................ ACCCAGCCAATGATTGGCTTGTGGGTTCCATG 36210 28 100.0 32 ............................ TCCGCGAGGATTTGGCCATTGCGCATTAGTAC 36270 28 100.0 32 ............................ ATCGCCGAAAAGATTGTGGAGCCCGCTTGTTC 36330 28 100.0 32 ............................ AGCAATGGTGCTGCTAATGCCAAGCCCCACTT 36390 28 100.0 32 ............................ ACTTGAGCCACCGATTCAACCAATTCATCAAC 36450 28 100.0 32 ............................ TATTTATCGACGAGACGTTTACAGCGTACAGC 36510 28 100.0 32 ............................ GGCATGGGCGGCTACACCGGCGGCATTGGCGA 36570 28 100.0 32 ............................ AAAACGGCACGCGAATGAGGGGTGGGGGGTGG 36630 28 100.0 32 ............................ AACCGAGAGAGCGCACGTTCCGGCGCATGACT 36690 28 100.0 32 ............................ TCGCAGTGGCTTAACGCCTTACGGCTCACCTG 36750 28 100.0 32 ............................ TCGATCAGGTTCTCAAGTATTTTGCGGTTGCG 36810 28 100.0 32 ............................ TTCTGGGGCGGCAAATGGAGCGCATGGCCAGA 36870 28 100.0 32 ............................ TGTTTGCTCATAGCGGGTAATTCTGGCCATGC 36930 28 100.0 33 ............................ CATTGGTGGTATTGGCTTTATAGGGCTGTGCTT 36991 28 100.0 32 ............................ TGCGTCATGGGTTGCTGGTAGCTTTAACGGCA 37051 28 100.0 32 ............................ TTGGATTTAATGACGATCAACAGCGGGATATT 37111 28 100.0 32 ............................ TGATACGCTTGAGCGTCGTCGACTACATCAGC 37171 28 100.0 32 ............................ TTTAATGACACGATGACATGACTCATGGTGTC 37231 28 100.0 32 ............................ TGCTGGGGTGATCCCGCAAGGTCGTCTATACG 37291 28 100.0 32 ............................ AATGAGAAACGAAACCCGCAAAGTATTTAACA 37351 28 100.0 32 ............................ ATGGTCAGGTCCTATCAGTGGTTTCGGTGCAA 37411 28 100.0 32 ............................ TACTGACCCAACTGATCTGGAAAAGAACTCTT 37471 28 100.0 32 ............................ AATTGCTTGGCTTTACCAAACAAGACCTGCAG 37531 28 100.0 32 ............................ AGCCGTCGAGCATGGCAGCAATGGGAGCGCGG 37591 28 100.0 32 ............................ AGATTGGGGCGACTATTTTTTCAATGCTAGTA 37651 28 100.0 32 ............................ AGATGAAGCGCGACACAAGCGCGACACAGGAA 37711 28 100.0 32 ............................ TCATCGTGGAGTTGGCTAGCTGGTACGCAGTT 37771 28 100.0 32 ............................ ACCAGTGGCACGGTACCGCGCATTCTGTGACG 37831 28 100.0 32 ............................ AAGCCCGCCCTTTGATGGGTCGTAACCAATCC 37891 28 100.0 32 ............................ AGCAAGGCAGCGCAGGTGTTCGATGCCAACGA 37951 28 100.0 33 ............................ TGCTGAATATCAGAGCGAGGCTAATACTGAGAG 38012 28 96.4 32 ..............C............. TACTCTGCCAGACGATGACGAGATAGACCGTG 38072 28 100.0 32 ............................ TGATAGAAAACCACATAGATATACGCAACGTT 38132 28 100.0 32 ............................ TGAAACTGAATACCGAGTATGGGCGCGCACGA 38192 28 100.0 32 ............................ AGTGAATCGAACCCTAGGCGCGTTATCAATCT 38252 28 100.0 32 ............................ TCTACGGAGTTCTTCGTGGTCGTAACCAAATG 38312 28 100.0 32 ............................ CTCCGAAGCATCCGTACAAGATAGCGCTTCTG 38372 28 100.0 32 ............................ ACTGAGTCTAAGTCATCATCACTATCTGAGTC 38432 28 100.0 32 ............................ AGCTGGTGAAGAAGTTCTTCCCCATGGTTACC 38492 28 100.0 32 ............................ CAACAGACCTTGCCAAGTACTCTTACGAGTGT 38552 28 100.0 32 ............................ CTCAAGCTTGCGCAACAGGCGGTTTACCTGCT 38612 28 100.0 32 ............................ ACTGCAGCGAGACCAGCACTATCACCAAGTCC 38672 28 85.7 0 ...T.........T........C.C... | ========== ====== ====== ====== ============================ ================================= ================== 53 28 99.7 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CGGTTCGCTGATTATTGCCATATCAGCAGCATTAAGGCGGTACCAGAGCACACGAAGTTCGCATTGTTTTCCCGTAAACAATGTCAAACTAACCCTGAGCGTTTAGCTAGAAGGCGAGCCAAACGTAAAGGCGAAACTTTAGAGCAAGCAATGCAACACTTTGCAGGCTTCAAAGATGAGAGCTCAAAGTTGCCTTTTATCGCTATGGAAAGTTTGTCGTCTGCTAACGCCAATGGTGACGCCAATAAATTTCGTCTAATTATCGAGCAAAAAATATTACCTGAGCATCAGCCTGGCAATTTTAATTGTTACGGCCTTAGTCAAGACGCAACGGTACCTTGGTTTTAACCCTTAATTATTGAGTTAAACACCAAACGAAAATGCTCTTTAAAAAATCGAAATAAAAACAGTAAGTTACAACAAGACGTTTTTTGATAGGTAAAAATGATTTTTTGAACCTATCTGTCTGTTGTAACTTATTTTTTTGTCGAGAGTCTTCT # Right flank : ATCTTGTTCGCTAAGTTTCACCTTCGACTAGCGCCTACTAGCATGCACGCCGCTCGGGGGGGAAACCGAGGTAATTGAGCTCCCCCTCAAGCAACGCCAAACCCAAATCAACCTACCCGGCGGTGAAACACCAACGAGTACGTGACAGGTATCACCAGTAGGGTGAGCAAGGTTGCGAAGCCGAGGCCGAACATGATGGTGACGGCCATGGCGGCGAAGAACTCGTCAAATAGCAGCGGTATCATGCCTAAAATGGTGGTGACGGCGGCCATGCTGACCGGGCGTACGCGGCTGACGGCGGCGTCGAATAGCGCGTCGCTCGCTGCTTTGCCACTGTCTTCCTCGATTTGTACTTGCTCCAGCAATACCACGCCGTTTTTAATTAACATGCCGGTTAAGCTAATTAACCCAAGTAGGGCCATAAAGCTAAATGGTTGGCCGGTGAGCAACAGCCCGAAACTGACGCCTATCACGGACAGTGGCACTGTGGTCCAAATCAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //