Array 1 1971-2360 **** Predicted by CRISPRDetect 2.4 *** >NZ_MDCB01000029.1 Xanthomonas albilineans strain CFBP2523 Xalb-CFBP2523-G1029, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1971 28 96.4 32 A........................... TGCTGATTGCAGCTCGTCCACGGCTTGTCCAC 2031 28 100.0 32 ............................ TGACGCAGACCGAGGCCGCCGCGCTGGTGCAC 2091 28 100.0 32 ............................ ATGATCTTTGCAACAGGTGGCGGGGATGGCTG 2151 28 100.0 33 ............................ ACTGCGGCTAGTGCAGCAACACCAGAAAAGATA 2212 28 100.0 32 ............................ AGAACGGCATGACTTGCATATAGCCGCGCGCA 2272 28 100.0 32 ............................ TTCGAGGCGAAGCTGAAGGGGGATGCGTTTCA 2332 28 96.4 0 .........................C.. | T [2356] ========== ====== ====== ====== ============================ ================================= ================== 7 28 99.0 32 GTTCACTGCCGTGTAGGCAGCTCAGAAA # Left flank : TTGGTGGTTGCATGAACGCTCCAATCACGTCAAAAGCCAAGTGGTTTTTGCACATTTTTTGCTTATTTCTTGAACAGGCCATCAATGCCACGCAAAGCCCCCACGCCCTGCCGCCACCCTGGTTGCAGGAAGCTGGTTTCGGATGGTTCTGGCTACTGCGCCGACCATCAACGTGACAAGGTGGGCTGGCACAAAGACCGGCGTAATGCACATCAACGTGGCTACGGCGCGAAGTGGCAGAAATTGCGCGCCTTCGTCATGCACCGCGATCAAGGACTATGCCAGCCATGCAAACAGTCAGGACGCTTGACGCCGGCCGTGGCGGTGGACCACATCGTCCCAAAGTCGCAGGGTGGCACCGATCATCCAAACAACTGCCAGGCGATCTGCCATCGCTGTCACGTACTCAAAACGGCGCAGGAATCGCGTCAGGGGCGCGAAGGTGCTTGATGCAAGACAATTTGGACATATGCACAATGACAACGGTCATGGCATGCTCG # Right flank : ATGCTCGGGGCATCCATCGGACTCGATGCTGGGTAGGGGGGTCAAATCCTTGCGATGCAATCGCAAAAGACCGCTCGCCCCCTCAATTTTTCGCGCGTGCAAAATGAAAAACTTTTTTTTGAACAGATCCGTGTCAAAGCTAAGCGTTGCAAGGGCCTACAAGGCTGACTTGGCGCAGATCGAACAGGTCGATGCGACGCCATGGACTGCGGCAAGTCACGCGGACATGACCTCAGAACTGAAAACCTATGCGCGGTCGTAAACCTCTGCCTGTAGCAATCAAGAAGATCAAAGGTACGCTGCAAAAATGCCGGACCAACCCGCATGAGCCCCATCCCGAGGGGCAATTGGGTGCCCCCCCGGAGTACATGTCTGACATTGCCAAGGAGGCATGGACCTATGCGGTAGAGAACGCACCGCTGGGTTTGTTTTCTTCCCTTGATGCCACGGTTCTGGAACGCTGGGCCAATTGCGCAGGTCTGTACCGCGAGGCGCTGGCC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 47997-49945 **** Predicted by CRISPRDetect 2.4 *** >NZ_MDCB01000018.1 Xanthomonas albilineans strain CFBP2523 Xalb-CFBP2523-G1018, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 47997 28 100.0 32 ............................ GATATGTCACGAGCTGCAAGGTCGCGCTTAGA 48057 28 100.0 32 ............................ TGGGGTGGTGTTCGGTGGGAACTGGCGAACAC 48117 28 100.0 32 ............................ AATGCTCAGCGATATCATGCCACTTATGCTTA 48177 28 100.0 32 ............................ TCATGATGTTGTTGCAGCGCGGTCGGCTGCGG 48237 28 100.0 32 ............................ TGTGGGAAAAGTCTGATCTGCGGATTTTGTAA 48297 28 100.0 32 ............................ ACCCGGTAGTGCCGGGCGACGTGTCGCAGGAG 48357 28 100.0 32 ............................ TCATTGAATTTCTGCCACGGGGTTGGCAGCCC 48417 28 100.0 32 ............................ TTTTTTGCTGCCCTGTGCCGACGCTGCCAGCA 48477 28 100.0 32 ............................ GTGAGCGCTGGGCGCGCGTGTATCCGGCGGCT 48537 28 100.0 32 ............................ CATCGACCATTACCTTGCTCATCATTTCCATT 48597 28 100.0 32 ............................ TAATCCGGTCCGGATCGCCGTGCAACTAGGGA 48657 28 100.0 32 ............................ GGAACTGGATGGGGAAGGATTCCGAGAAGTCG 48717 28 100.0 32 ............................ CAGCCCAGCCGCTGCGCCCAAGGCAGCGTTAC 48777 28 100.0 32 ............................ AGTCCGAGCAGGACGGCGGTCTGTAGGCCGAA 48837 28 100.0 32 ............................ GTGCGCAGCATCGAAGCATGGATGATCGAAAA 48897 28 100.0 32 ............................ GGAAGATTTCGACTGCGAAAGCGCTGCTTATG 48957 28 100.0 32 ............................ AGAAGGCCATCGGCGCGGTCATCGCGCAAGGC 49017 28 100.0 33 ............................ TATTAGCTTGCGCTACCTCCTGGTAATTTACCA 49078 28 100.0 32 ............................ TGATCGCCTACCCACGTCGCAGCATCCGCACG 49138 28 100.0 32 ............................ CAAAGGAATCGCCACATTGCCACCGAAAAATC 49198 28 100.0 32 ............................ AAGCTGCGTCACGCTCAATGCGCGCGGACTGG 49258 28 100.0 32 ............................ AAGCTGCAGGCATGAACCAGCCTCAATTTGCT 49318 28 100.0 32 ............................ TAGCGCCACGAGTGCCGGTGCTTCCCCGCCGA 49378 28 100.0 32 ............................ CATGCCGTTTTACCTACGCTTCCGATTGCTGC 49438 28 100.0 32 ............................ CCTCCACCCATCGACAACACAGGAGAACGGAT 49498 28 96.4 32 ........................A... AGTCATTTCGCCCTCGTCGCGGGCCCTGGAAA 49558 28 100.0 32 ............................ GTCAACTGGCTGGACAACGCCGGCCTGGTGAC 49618 28 96.4 32 A........................... CATACCGCCCGCAATCGTTCCACCGACAGCGC 49678 28 100.0 32 ............................ TGCATAAGAGGAATGAACATGGGCTTTCTGGA 49738 28 100.0 32 ............................ ATGGTGTGACGCTGGAAGATCCAACCGAATAC 49798 28 100.0 32 ............................ TTGACGGCGCTTCGCTATGTGGCAGGAGGTTT 49858 28 100.0 32 ............................ ATTGAATCGGTATCTTGCACAATCTATATAAC 49918 28 82.1 0 ......................TGTC.C | ========== ====== ====== ====== ============================ ================================= ================== 33 28 99.2 32 GTTCACTGCCGTGTAGGCAGCTCAGAAA # Left flank : CCTGCACCATCTGATGGCAACCACCTGGCTGCATGGCGTTCGCGACCATGTGACCATCACCAGCATCGGTGCCGTGCCATCCGAGGCAGTGCACCGACAAGTGACGCGTGTGCAGGCCAAAAGCAGTCCCGAACGCCTGCGTCGGCGCGCCATGCGCCGACATGGGATAAGTGGGGATCTCGCCGTCCAACGCATTCCAGATTCGGCGGCAGAACAGTTGCGACTTCCGTTCGTCGTACTGGGCAGCCGCAGCACCGGCCAAGCCGCGTTCCCGGTCTTCGTACGGCATGGCCCCGTACAGCAAGAACCCGTACCTGGCGACTTCAGCAGTTATGGACTCAGCCGGGGAGCCACCGTTCCCTGGTTCTGACCCTTTTTTTCTTACGACCAAACCCACCAAGGAAAAACAAACACTTAGCAGCCGCCCCAGAAAAAGGGGTTGGCTGCTTTTCTTTATGCGTTTATCTTTCAAGTCAAAGACTTGGATAATAGAACGCCTA # Right flank : CCAGCACTTTCAATCTTCATCTTCATGGCGTTGCGCATAGAAATCTGCCGCCGCCTCGATCAGGTAGGTATAGCGTTTCACCATCGCCTGCCAGGCCAGCGCCTCCACTTGGTGTTCGACGTGGATATCCTCCGGCACCTCGCTAACCTCATCGATCAACTTTGGGACTTCGTGATTCCACCAACGCAGCATCAGGTCTGGCCGCTGATGCGTGCGAATCAGCGACTCCACCAGCGACTGCATCGCCGCGAATTGCCGCACCGTGCGAATGCGCTGGCCTTCCAAGAAGTGCGTGCGCTCCTGTTGCTCAGCCAACGCCTCTTCCAGGGCATCCAGCCGCTGGCGGAGGTCAGCAGGCCCTCGACCGAAAACTCTCATGCGATTACTCCCCGCCCAGCGCGAGCCGGGGCACCTGCGGTGCTTTCAGCAACAGCTTCTTGAAGTAGCTGTCCTTGTAGTAAAAAATCTTGTCCGCCAGGATCGGATAGCCAATGCCCTCA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //