Array 1 45199-46806 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSTY01000004.1 Ligilactobacillus salivarius strain FZJTZ10M2.scaf Scaffold4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================================== ================== 45199 36 100.0 30 .................................... CTTGAATTTGTTGCGTCCCGGCAATCGCCC 45265 36 100.0 30 .................................... CATTGATCTTAATATTAGGGGAGTGAATGT 45331 36 100.0 30 .................................... TTGCAATTGCCTAAGATCATCGGCGCTCAA 45397 36 100.0 30 .................................... CGTTGTTCCCATGTAAACTTTGTTCTTCCT 45463 36 100.0 30 .................................... ATAGATAGCTTGAATTTCCTCATACAGGTA 45529 36 100.0 31 .................................... TCAACTACAATTAACGATGGCTTATATTATG 45596 36 100.0 30 .................................... CATCGAAAAGTCATAACTACCTTGACGATA 45662 36 100.0 30 .................................... TATAGAAGCGTTACAGTATAAGAACATGGA 45728 36 100.0 30 .................................... AAACTTGACAAATCAAAGTACACTATATTG 45794 36 100.0 31 .................................... AACTCACGTTCTAACCAGCCTTGACTGACAA 45861 36 100.0 30 .................................... TTAACCCAAAAGAAAGCAGCTGAACTATTA 45927 36 100.0 30 .................................... TTAACCCAAAAGAAAGCAGCTGAACTATTA 45993 36 100.0 30 .................................... CGAAACGGAAGTTGTTAAGCATTCAACAGA 46059 36 100.0 30 .................................... CATTAATTTTATCCTTGGCCCAACTCACAC 46125 36 100.0 30 .................................... TGACAAAATAAATGTATTCAGCTAGTATTT 46191 36 100.0 30 .................................... AATGTAATCGATAATTGCAACATACTTATC 46257 36 100.0 30 .................................... ATAGTGTCTAAGTCTTGAAACTGAGCAACC 46323 36 100.0 30 .................................... TATCACAGAAAGTTCTCCAGCAACATTATT 46389 36 100.0 30 .................................... TTGCTGTCTTACACCTATGTCAATTCAACT 46455 36 100.0 30 .................................... AAGTTCACACGAAAAGCCCTATGACAATAC 46521 36 86.1 29 ..........T.........T...A......G.T.. ATCTGCGTTCAGTTGGTGTCTCAATGCTC C [46554] 46587 36 94.4 82 ........................A..A........ ACAACTGGAGTTTGAGTACGTTTAGCTTGTGTTTCAGAAGTATGTTAAAAACCTATTATATGTTATAATATGAAAGTGTTTA 46705 36 83.3 30 .....G....T.........T.........G.T..T AGTAATTCACCGCTAGTTAAGTGGTTTTTT 46771 36 80.6 0 ..........A.........T...AG...CG..G.. | ========== ====== ====== ====== ==================================== ================================================================================== ================== 24 36 97.7 32 GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Left flank : AACAGACCGAATTAGTAAAAAGTATATGAATGTATTAATTAAGAAGATTATTGAAGACATCACAGACGATGAAAGACAAGCAATACTAAAATCAGTAAATAGTTTGTATGATCGTATTCGAGAGGTTTTGTATAAAATTGATATACCATTACAAGTAGATTATGACAATGATTTAACAAGACTATTTAAGTATTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCGTATGATAGAATATCTTCAGATGTTAAATTGCATGTGGAACTAAATAGAGAAAGAATTATAGGTCTAACCAATGTCGCACATTATCTCACTAAAGAAGAGTTTCAGGAACTTGTAGGTCTTGTTAAGGCGACTAACTCATCAATGTTTATAATTGAATTCACAGAAAAGAATGGTCAGAGATTCTTTGAAAGCTGTGATAATTACTACATTGATGAGGATTATATTGATTGGTACTAACGAATCGTTAAATTTTGATTATAAAGTAACG # Right flank : CTAAAATACAAAAAATATTTCATAATATTTATAAATCTATCAGAAATTTTCTGGTAGATTTTTTTAGTGTAAAAATTTTTGAGTTTAAGATATATTATGGTTGATAATGTAATATTATATGATATATAATATAGTTGAAGATGAGATATAAAAGAAAGTGAGGGATGATGATGAAAATTCAAGTTAGTTCTGATTTACTAGATGGTTTAGTATTAGCGCTTTTAGATAAGCAAGATTATTATGGATACTCATTGACACAGGATATGCAAAGAGCAATTTCAATTTCAGAATCAACACTCTACCCAGTATTACGAAGGTTAAAGAATAATGGTTTATTAGAAACATATGATCAATCATATCAAGGGAGAAATCGTAGATATTATCGCATAACAAATAGTGGGGAAGAACATTTAGGAAGAGTTAAAAAAATGTGGAGCGACTACAAAGTTAGTTTAGATTCAATTTTCGAAAAAAACTAGGGAGGGGGAATAATAATGAAC # Questionable array : NO Score: 6.00 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.14, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [73.3-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //