Array 1 16503-14885 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSVF01000022.1 [Clostridium] spiroforme strain OM02-6 OM02-6.Scaf22, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 16502 33 100.0 36 ................................. GAATTACGACTAGCGTCAACATTTCTATCAGCAGAA 16433 33 100.0 35 ................................. GACGGAGTACTAGCACTTGTATTACCTGCAGCTAA 16365 33 100.0 36 ................................. ATTTTAGCTACAGGTTCTATTAATTCTGGTAATTCT 16296 33 100.0 36 ................................. ATGCTTGAATTTGGTTGGGAACTCATTCATTAGCTC 16227 33 100.0 34 ................................. AAAACAATTTTACCTAAAACAGTTGAAAGTAATG 16160 33 100.0 36 ................................. TAACTTCACCGCTGTTTGGTTCAATACTTAGAATTG 16091 33 100.0 35 ................................. TTCTTAAATATGGCTGTAATGGTAATGGTAATCGC 16023 33 100.0 36 ................................. TTCTTGCAAGTTCTTCTCTTGCTTTTTGAATAGATG 15954 33 100.0 35 ................................. GACTTCTTAGTAATATCTTTACTTGCATCTTCGTG 15886 33 100.0 35 ................................. GTGTATATAGGTAAAATACAATGGAATCACAGGAA 15818 33 100.0 36 ................................. GGTGTAATGAATTTTGCAAGTTCTATTGCAAAATTA 15749 33 100.0 36 ................................. GGCTGTTGAACAACCTGATTAACAGAAATTGGAGTG 15680 33 100.0 36 ................................. GTACAATGTAATTTGTCATCTCGAATATATAATTGC 15611 33 100.0 36 ................................. TATTTAATCAGACTAACAATAAGTGATTACTTTTCA 15542 33 100.0 37 ................................. GATGAAATAATAAAAAAATATGAATCAGCTATTATAG 15472 33 100.0 35 ................................. ATGAAAAGCAAAATCAAAAGTCAATTCTTATCAAG 15404 33 100.0 35 ................................. CTGCATAGCTGGCATGCTTTGCGATCACATAAATA 15336 33 100.0 36 ................................. TTATCAACCTTTTCAGCAATTCCTGTTGTTGCATCA 15267 33 100.0 36 ................................. TGCATTATTTTTATCAGCGATACTTTGAAATTGATT 15198 33 100.0 36 ................................. CTTACTGAAAATCGATTAGTTACTGATAGGTTATTC 15129 33 100.0 36 ................................. AATAATTTTAGCTATCTTGTTTGTATGATCTACGAT 15060 33 100.0 35 ................................. ATCCAAGCTTGTGCTTGATTTAAAATATTTTCTAC 14992 33 100.0 38 ................................. TTCTTTATGGTGGCGTTCTTGCAGATAGTATGTTTCGC 14921 33 84.8 0 ...........A.................GTTA | AATC [14901] ========== ====== ====== ====== ================================= ====================================== ================== 24 33 99.4 36 GTTTATAATCTGATCATTATATGAAATGTAAAT # Left flank : TCCTCATGAGATATTACATGCTATTTGTTTTAAAGAGAATGTATATTTATACACAAATTTAGCACAAGGAATGTTATTTGTAACTGGTGTTGAGTCGATGAGTAAATCAAGGTATGTTTTTATGTCGTTATTACCAAATATTGTTTTTGGTTTGGTTCCTTATATTATTGGATTAATATTTCCAAATTTGATTTTCTTTGTTGTATTTGGAATCATTTCAATTAGTATGGGAGCAGGAGATTATTATAATACATATAATGCTATAACTCAGATGCCAAAAGGAGCAAAAACATATTTGTATCAATTTAATTCTTATTGGTATATACCATAATTTAAACAAATTTTCAGTCGATCTTAATTATGTAAAAATATATGGAGTACGACAGAATAAATTTAGCAAATAAACAAAATAAATATTGTATTTATACAATTAATATGATAATTTAAAGATATAGAGATAATTTAAAATAATTATTTATTTAATCAATACCTGTTAACGG # Right flank : GACTAAATTGGATATTATAGGAGAATTATTATAATTTAGTAAAAGTGGGATAATCTAAAATAGTAAGAAATAGAAGAATTTATAGTACTAAATTAAAAACTTGTAGAGTTGTAGTAAACCTAGAGCTGAGTTAGTTTGTGAATATGAATTAATTCTTTTTACTTTATTTTCATAGATTAATAAATATGATCTTAACTAATTCATTAAATATTGAAAAAAATTATAGTAATGCTCAAAAAGAACTTAATATTATTTAAAAATAAAGGGCGCTATAAAATTTCATGGGGATTTGAAACAAAAAATTTCAATTCCCCTTTAAAATACTATGGGGAGAATATAGTATCTGGCTGCATTCTCCTCCTTTATTTTTTCTTAATCAAATTCGTCTGTTTCTTCATCAAATGATGTTTCTAGATCATCTGATTTTATCTTTATTGAATCATTGTATTCTATATTCAAATCATATTTTTCATATTTGTTTTGAGAGTACAGTATTCTAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATAATCTGATCATTATATGAAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:81.82%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [66.7-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 5012-1792 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSVF01000014.1 [Clostridium] spiroforme strain OM02-6 OM02-6.Scaf14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ======================================= ================== 5011 33 100.0 37 ................................. TGTTTAGTTGTTGTTTTAGATATTTTTGGTGATGAGT 4941 33 100.0 36 ................................. GATTAATGATCAGGAAGTAAACATTTTAAAAAAACC 4872 33 100.0 36 ................................. ATGGAAAAATTGACAACAGAAGAACTAAAGAAGCTG 4803 33 100.0 36 ................................. ACGCAATTTATCAAGGAAGTTGAAGAATATGTTGAC 4734 33 100.0 35 ................................. AAACAACGTGGTACTGTTTCTAAGATGTTATTAGA 4666 33 100.0 37 ................................. TCTGGATATGATGCGAATGGATACTTAAATTGAGGGA 4596 33 100.0 38 ................................. ATAAGACTTCATGAAGCATTTGGTGATGGCTATAGAAA 4525 33 100.0 35 ................................. ATCCAAATGTCATTCAAATGATCATTATAATATCG 4457 33 100.0 36 ................................. ATTTGAGATGCTACACTGCTAGTGATATCATATTCA 4388 33 100.0 37 ................................. AAAGGAAAACCAAGCGACTTGCAATTATATAACATCG 4318 33 100.0 39 ................................. ATTGCACTTTCAAACATTGCATTTTCAATGTCATCAACG 4246 33 100.0 36 ................................. ATGTTCGCAAAGACAGGCCAATAATAATCAAAACGT 4177 33 100.0 35 ................................. GAATCATTTGATGAAAGATTTATGGAAATATGTTT 4109 33 100.0 36 ................................. CATTCTATTAAGACCCTGCTGATAACTATGTTTATA 4040 33 100.0 36 ................................. CGACCAAAATTAAATTTTGCAACATCAACGTTATCA 3971 33 100.0 38 ................................. ATAAATGCTATAGCTTTATTTCCTATTGCTTCATGTTC 3900 33 100.0 36 ................................. GTAGAAACAATTTTTTTATTAACATTGACTATAACG 3831 33 100.0 36 ................................. AAAATTGTTATGTAATTGTTTTGTCTGACTTTAGTC 3762 33 100.0 36 ................................. GCTTGAGCAGACTTTATAGCCGCATTAGCTGCAATA 3693 33 100.0 36 ................................. AATTTAAGTGGTTTTCTTTTAAAATAAAATATGTTA 3624 33 100.0 37 ................................. ACGATTGATATTAAAGGAACTGACGATATAACTAGAA 3554 33 100.0 38 ................................. AGCAATATTGATGAGTTAGTTGCTTTGATTCCAGCAAT 3483 33 100.0 36 ................................. AGCAATACGATTGGTGTAAATTCTCCAGCAATCCAA 3414 33 100.0 36 ................................. ATTGTTATCACTCAATAGTACATATCCTTTATCCCA 3345 33 100.0 36 ................................. ACAATATAACTTGGAGTAACATTGAATAATTTTGAT 3276 33 100.0 36 ................................. AAGCGTAGAACTAGAAAGAAAAGAGATGAATAATAA 3207 33 100.0 36 ................................. ATATTCAATTGGTCGTCCAGTACTGTCGATATTTTC 3138 33 100.0 36 ................................. GAATAATTAGAAATTCCATATTGTTCTGCATACTGT 3069 33 97.0 36 ....G............................ ATTTGAGATACTACATTGCTAGTAATATCATATTCA 3000 33 100.0 35 ................................. ATTCCCAAAAAAGGATTAAGTTATACCGTTACTAC 2932 33 97.0 36 .........T....................... GTAATTACAATTAAAAATGGTTATTGGCATGTAAAT 2863 33 100.0 37 ................................. TACTAAACTAAGCTCCTACATTGACATTGGATCAAAA 2793 33 100.0 36 ................................. ATTGAACAAAGTATCCACATGTCATCAACTACTATA 2724 33 100.0 36 ................................. ATCAGTCAATCAGAGATAGAAAAAATTATTACTATG 2655 33 100.0 37 ................................. ATTCGTGCATACAATTTAATTTACAATGAGTGGTTTG 2585 33 100.0 36 ................................. TAAAAACTTGCGCAGCTATATTATCACTAGCCGCTA 2516 33 100.0 36 ................................. ATAACAAAACCATGTTCAGTAAAAGATTTAACAAAA 2447 33 100.0 37 ................................. TAAAACGTCCTTATGCGGCGATTGGTTTTATCGCAAC 2377 33 100.0 38 ................................. GCGTTAAAATGAATTGATATAAATAAGTCTGCTTTTTG 2306 33 100.0 35 ................................. CGTTTATCGGCGGTGAAGGTGAAGGAACTGATAGA 2238 33 100.0 36 ................................. TAAATAATTGTATCACTGTTATCTATTTGCGCTAAT 2169 33 100.0 35 ................................. GTTAATGAAATAGGGATTTTATTAGTATCAGCAAA 2101 33 100.0 36 ................................. ACGGATGAAAAAGGAAAGCCTTGGAGCAGCACAATG 2032 33 100.0 37 ................................. AAATAAGATGTCATTAATGTACATTGATCACCCATAG 1962 33 100.0 36 ................................. AACATACAATATGACGGTCTAAGTTTATTATCAGGC 1893 33 100.0 36 ................................. CTTTTATCTGCTGATCTACTTTGTAGGGAACAGTAA 1824 33 78.8 0 .........T..A.....C.......C..T.TA | ========== ====== ====== ====== ================================= ======================================= ================== 47 33 99.4 36 GTTTATAATCTGTTCATTATATGAAATGTAAAT # Left flank : TTAATTAAACATATTATTGATGAAAAAATATATGAAGGGTTTAAAATATGGTGGTAATATGTATTTGATTGTTATATATGATATAAAACAAGAAGAAAATTATACTAAAAGACAACGTTATGTTTTTAAAACATGTAAAAAATATTTGACACATATACAAAATTCTGTATTTGAAGGAGAACTTGATCGAGCTCAATATTTATCATTAAGTTCAGAATTAAAAAAATATTTGATAGAAGATATAGATTCTTGTATTATATTTTCAGCTAGGAATAATATATGGATGAAAAAAGATTTTATTACTAGAAAATTAGAAGGAAATGATCAATTTATTTAAAAGTCTTCAGTCGATCTTGATTATGCAAAAACACGAGGAGTACGACAGAGTAAATTTAGCAAATAAACAAAATAAACATTGTATTTATACAATTGATATGATAATTTAAAGATATAGAGATAATTTAAGATAATTATTTATGTAATTTAATGCCTGATAACGG # Right flank : AAAGATATTTCTTGTTTTAGGTCTTAGTGGTTGTAGTAACAACTCACAAGATGAATCATCCAATTCATTAACAAATGAAAATAAAACACACAATACAGACACAACTACTATTGATGGTAAGATATTAGTTGTTTATTATTCGGCAACTGGAAACATTGAAGATGCAAGAAATATTGAACTTGTTTCAGCAACAGTAGAAAATTGGGATGAATATGATCGGGTGTTTATCGGTTATCCACTATGGTGGCAATACTGCTTAGCCAGTAAATAGTTTTGTTGAAAACAATGATTTTATTGGAAAAACTGTGATTCCATTTTGTACTTCTTCAAGTGATGGAATTGGTGAAAGTGGTCAATTGTTAGCTGGTATGGCAGGAACTAGTAATTGGCTAGAAGATAGAAGATTTTCATCAAATGTATCTCAAGATGATATTCAAGAATGGATTTCAAGTTTAAATTAAAGAAGGTGTTAATGATAAAGATATCAATATATTTATTGC # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATAATCTGTTCATTATATGAAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:81.82%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //