Array 1 3678-2923 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QHIL01000035.1 Staphylococcus pseudintermedius strain SP102a Contig35, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
      3677	    36	  97.2	    30	............................G.......	GCAGAAAAACCCTTTGTCAGTTATGGGAGC	
      3611	    36	  97.2	    29	............................G.......	GACAATTGCATCATCGTTGTCATCTGAAG 	
      3546	    36	  97.2	    29	............................G.......	CTTTCTAAAAAACGTTGATACGCTTCTTT 	
      3481	    36	  97.2	    29	............................G.......	CATTACCTTTGTTTGCGTTGTTTGATTCT 	
      3416	    36	 100.0	    30	....................................	ACATCTGAACCTACCGCGCTATCGCTTACT	
      3350	    36	  97.2	    29	............................G.......	GACAATTGCATCATCGTTGTCATCTGAAG 	
      3285	    36	 100.0	    29	....................................	GTTAACTGAACTCGAGTGTTGGCGCTTGA 	
      3220	    36	 100.0	    30	....................................	ACAGGCTTAAAGAATCATTACAGTTTGCTA	
      3154	    36	 100.0	    29	....................................	AGTAATGATTTAGAAAAGCGTGAGCATAA 	
      3089	    36	 100.0	    29	....................................	AGTTTTTTGGCGAGAACTAATGGGATTTC 	
      3024	    36	 100.0	    30	....................................	GTTATGATGTTTGGCGATATGGGTCGTCGT	
      2958	    36	  80.6	     0	..........................AC.TC.TC.A	|                             	
==========	======	======	======	====================================	==============================	==================
        12	    36	  97.2	    29	GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC	                              	       

# Left flank :   TTTTAATTATATTATTTCCGGAATCACATCTTGGCATACACGATATTAAAAAGTTTATACACCTTATAAAGAGATATAAATTTACCACGATTATTTTCACTAATCATCCTACTATCATTATTAACGAGGAAAACATATTTCTTTGTAAAAGTAATAAGAAGTGCCACGACATCGAAAAAATATATGAAGAATTAATGTTATTTGTTCCTGAAGAAGTAGTGAGTCATCAATTAGTTAACATGATTGCATATCACGAATTCGTTGGTGAAAACCTTTCCGAGTATGAGCGATATTTTAAGTTTATCAATCATTACAATTAGGCTATACTATATTTAACATTATATGATAGAGAAAAGTTGATCCAACGATGAAGTAATGACTATGTGACTTCATTCGTGATGAAGAGTGTTAACTTTATCATCGAGTATCATATCTGACTTCTTTTAATAGTGCTAAGCCTCAATTTTGAAAAGGATTGAGTTAATGTTTTTGGATTTGAG
# Right flank :  CCTTCTTTATAATCGTACATCAACCTCACTATGCTTTCAAAATAATTAAGAGGCATTGTGGGCTTTTTGTGTTTATACGAAATGTTGTATGAATCTCTCAATCGTGCCACCATGTTATAATAGGTATAAATTGTTCATAAAAAATAAATAGAAAGCAGGGGAAATCTATGGAAGCAATTATTGCAACTCAACCGTTCCAATTAGCAGAAGGTCAAAAGTTTGAAAAAGTATCGCGTGAGCTCCCAACACCAGAGGCACATGATATTTTAATCAAAGTGTACGCAACAGGGATCAATCCGGTTGATACGAAAATGCGGCAAGCCCCGTTAAATGCTGAGGCACGTGTCCTAGGTTTTGATGCGGCAGGTGTGGTTGAAGCGGTCGGCGATGCGGTTACGGATTTCAAACCGGGTGACCGAGTATATTATTCAGGATCGAATCAACGAGATGGCTCAAATCAGACGTATCAGCTCGTGAATGAAAATTATTTAGCGCATATG

# Questionable array : NO	 Score: 6.00
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.88,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC
# Alternate repeat :   GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:75.00%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,-0.20] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [7-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,4.91   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
//