Array 1 810-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLCY01000162.1 Acinetobacter baumannii strain ABBL018 contig-42, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 809 30 100.0 31 .............................. GTAGTCGAGTGTTCTATTACTAAAAACGAAA 748 30 100.0 30 .............................. GCAGCACCAACAGCACCTACAGCAATCACA 688 30 96.7 30 ............................T. TGGCTGCAAGCGGAACCATAATCCATGCAG 628 30 100.0 30 .............................. CGGAATTTTGTTTACAAGTTCGCAAGGGAA 568 30 96.7 30 ............................T. CTCGATTGTGCAGACTTATACAATCCAATT 508 30 93.3 30 ............................TC CAATTGATCCAATTGATCAACCTCCATCAG 448 30 96.7 30 .............................A CCAGAAACCCCCGCCCAACATAGTGGCTTC 388 30 96.7 30 .............................A CAGCACCTACAGCAATCACAACTAAACCGA 328 30 93.3 30 ............................CA CGTGATGCAGCAGATTCATTACGTGATCCG 268 30 93.3 30 ............................TA TTCCGAACGAAAGTAATACGATTTTACGTT 208 30 93.3 30 ............................TA TCTAAAAGATGAAATAAAATCCGCTAGCAT 148 30 96.7 30 ............................G. ATGGGGGATGTTATCAACCGCCTGATGATG 88 30 100.0 30 .............................. CTTCCGCAATGGCCTTTTTGAATGCTTCAT 28 28 93.3 0 ............................-- | ========== ====== ====== ====== ============================== =============================== ================== 14 30 96.4 30 GTTCATGGCGGCATACGCCATTTAGAAAAT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACTAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : A # Questionable array : NO Score: 5.52 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.44, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 105658-100824 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLCY01000206.1 Acinetobacter baumannii strain ABBL018 contig-8000038, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 105657 30 96.7 30 ............................T. TTTGAATGCTTCATTGATTAATCGATGAAG 105597 30 100.0 30 .............................. TTCATAGTTATAGGTGAAGTCCCGTTCTAG 105537 30 93.3 30 ............................TC AAATCTAAACCATGCTCATTAGGCATAGGT 105477 30 93.3 30 ............................GA TGATGTAATGTTAGACCTTGCGGATTCATT 105417 30 93.3 30 ............................TA TTGGAATTGATTTAGATAATGATAGGTTTA 105357 30 93.3 30 ............................TA CCGCACCGATAGAAGCAACTTTGAATAGTG 105297 30 100.0 30 .............................. CTTTAGACACAGTAAAACCAGTTGATATTT 105237 30 96.7 30 .............................A ACAAAACAATCGCCCCATTAGGTTTTATGA 105177 30 96.7 31 .............................A TCACGGCAGGGTAGACAGCAGCAATATTACT 105116 30 96.7 30 .............................C ACAAAACCAACAGTACAATTTCTTTAGCTG 105056 30 100.0 30 .............................. GCGTTAGATGCGGCTATCCTCACTCACAAG 104996 30 93.3 30 ............................GA AAGAAGGAATCATCCAAGATGGTAACGGAT 104936 30 93.3 30 ............................TG TAGGTGGTCTATTACAGTAAGTAGCACCAC 104876 30 96.7 30 .............................G TATATTAACTGTTTTTTCGTACTTTGTATT 104816 30 96.7 30 .............................A GCTAAAACGCCTTCAAGTTCAGCCTGAAGT 104756 30 93.3 30 ............................GC AAGCGACTGTTGTCGTTTGGGGCTATGTAA 104696 30 93.3 30 ............................CG TATCAGCACTACGAAACACTGTAGAGCGTC 104636 30 100.0 30 .............................. CAGATACCGCTTGAAAAACTTCTGAATCGG 104576 30 93.3 30 ............................TG TACGTCAAATTACTTCTTATTGTAGTTGGG 104516 30 96.7 30 ............................T. CATCATCAAATAAATCTTCGTATTTAGTGA 104456 30 96.7 30 .............................G AAGCGTCATGAATATTTGGTTTGGCTTGAA 104396 30 93.3 30 ............................TG ATCATTAGTGCCTCTTCGGAAATCAACTTT 104336 30 96.7 30 .............................A AGAGTATGTATTAGAGGGCTATGCACTTAC 104276 30 93.3 30 ............................TG AAAATAATTAAATGGTCTATCACCGTCTTC 104216 30 96.7 30 .............................G TAGATGCAGCACACAGCAATCAGGGCGCTC 104156 30 93.3 30 ............................TC CAAAAGAGCAAGCAGAATTTAGTGCATGTA 104096 30 93.3 31 ............................CA CCAACCGACAATGTAGCATCGGCAACTAAAC 104035 30 93.3 30 ............................TA TGACACGCTATCAAGTGACGGTGCAAATAA 103975 30 93.3 30 ............................TG ATCTCTCTTAGCTTTGTATTCAGGGTCTAA 103915 30 93.3 30 ............................TG CTACAGATATAACTAATCAGTTAAATAACT 103855 30 93.3 30 ............................TA TCCATTTTCTGATGGTGGCGCATTCTCTTC 103795 30 93.3 30 ............................TC AAGCAAATCCCGATGATCCTACAGCACCTA 103735 30 96.7 30 .............................C AAGTTAGAGCTATTAGAAAGAATTATTTAA 103675 30 96.7 30 ............................T. TCGGGGTGGTTTTATTTTGCCTAAATTAAT 103615 30 96.7 30 ............................T. GTATTGTTGGGTTTCTAGTTACCAGAGCAG 103555 30 93.3 30 ............................TG ATTCAGTAGGTGCTAACTGGTATAACTTGA 103495 30 93.3 30 ............................CG TTGTTGGGTCTTGGTTGCGTAGTGGCCCCC 103435 30 93.3 30 ............................TA AACCATTATTAGGGTTTACGGTATTACTTG 103375 30 96.7 30 .............................G TCCATAAGACCCTCCATTTGTTTATATCTT 103315 30 96.7 30 .............................G AAGGGTATAGCAAATATCGTGATGGAAATG 103255 30 100.0 30 .............................. CATCGCCAGCAACAAACTGCAATGAGCCAG 103195 30 93.3 30 ............................CC ACTGTAGTACGAGTAACGTTACCGACTAAA 103135 30 100.0 31 .............................. GACATACAAACCCCTCAATAAAAGATGGGGC 103074 30 96.7 30 .............................G AGGGTTATGTTTTGGTTTCTAAGGATAAGT 103014 30 100.0 30 .............................. CATACATTAACTTTAAATAATCATTCTGAC 102954 30 96.7 30 .............................C ATGAAAAACTAGCTTCCACGACATCAATCC 102894 30 90.0 30 ...........T................TC TTGCTGTGCATAAGCCTGTAAGTTATTTAA 102834 30 96.7 30 .............................G TTGCCCGGATCACGACGATCATTAGAATAA 102774 30 96.7 30 ............................T. GGAGTCATCAATAAGAAACAATCCATTTAA 102714 30 96.7 30 ............................T. CTGGATCTATTCCAAAGTGTTTGCAAATTT 102654 30 100.0 30 .............................. CTAATCGATGGTGAAGATTTTGAACAAGAT 102594 30 96.7 30 ............................G. TATCTCAATGGTGTGACTTGTTAGCACTAG 102534 30 96.7 30 ............................T. AATGCAATTCGGAGCATGGCGTACCGAAGA 102474 30 96.7 30 ............................T. GTGTGGACTCCTCAATCAGCATCTTGAAAT 102414 30 93.3 30 ............................GC TCACAAGTCAAATACTATTTTGCATTATTT 102354 30 100.0 30 .............................. CTTTTTGCTTATAGTAACAAGTAGCAGAGT 102294 30 93.3 30 ............................GA ACTGCAATGCTGTGAGTAACGAACCTTGAT 102234 30 96.7 30 .............................C TTACCAGACACAGCACCTTCTTGAAGCATC 102174 30 100.0 30 .............................. GACGGTTAGTTACTTTTGATGTACCGCCAC 102114 30 96.7 30 .............................C TAACTCACCGCGATAAATAGACGCGATACC 102054 30 96.7 30 .............................G AGACACAGAAAAAGAATGTGAACAATGGGC 101994 30 96.7 30 ............................G. CGATTAAATCAGTCAAAGGACCCTAAGCCA 101934 30 93.3 30 ............................TC AAACTCACAACCTAGAAAAGATTGCTAAGG 101874 30 100.0 30 .............................. GAAAAAGCCCCATTCGTTGTGAATAGGGCT 101814 30 96.7 31 .............................C CAAAAGCTTTACGGTAAGACACGTTATGCAG 101753 30 93.3 30 ............................TA CGAAAACAAAAGATACTCATGCACCAGAGA 101693 30 93.3 30 ...............T.............A CAGCATTTACACCAGCAACCTTTAAAGCAG 101633 30 93.3 30 ............................TG TTACATGCCCAATTGGTTGGCGCATGTCAT 101573 30 96.7 30 ............................T. CTAAGCGAAGGCTAACGCTCACATTCAAAA 101513 30 93.3 30 ............................TG TAAAACCGAATCCCAAGCTGAATAGGTTTT 101453 30 93.3 30 ............................GG ACATGTGAGCTTCACACCATCCTTCAGGCA 101393 30 96.7 30 ............................T. GTTGCGGCTCTCGCATGATGTGGTTTGATC 101333 30 96.7 30 .............................A CTGAAAAGATGTTGAGTGCAGGTTGTTCTT 101273 30 96.7 30 ............................T. GATGCTGAAAACTTCACAGCAGGCAATCCA 101213 30 93.3 30 ............................TG TAAAGGATGTGAGGAACGTCGTGAGTGGAT 101153 30 96.7 30 .............................A CTGACTAGTGATTTGAGGAATGTGCTCACC 101093 30 93.3 30 ............................CA AACACAGCATTATTGGGCCTTCAATACGAT 101033 30 93.3 30 ............................GA TGCAGGCGGAGTCTGCTATGCGACTGGTAC 100973 30 93.3 30 .................T...........A ATAACCACGGTTATGGTAAGTCACTTTTAC 100913 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 100853 30 66.7 0 ...T...A...T.....T..C...AGCGT. | ========== ====== ====== ====== ============================== =============================== ================== 81 30 95.1 30 GTTCATGGCGGCATACGCCATTTAGAAAAT # Left flank : | # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAATAGACAAAGCCGAACAGCCTGCTGAAGTTGAACAGATTAAACAGTTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.16, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //