Array 1 51775-54516 **** Predicted by CRISPRDetect 2.4 *** >NZ_SRRQ01000007.1 Dellaglioa algida strain LTS37-1 sequence07, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 51775 36 100.0 30 .................................... GCCAATCAAGCTGTAACAGATGCCACAACG 51841 36 100.0 30 .................................... CCCTGGTGTTGTAACTTAGCTTCATGGCCA 51907 36 100.0 30 .................................... AAAATATGGAGGCTATTATGCAAATTACAT 51973 36 100.0 30 .................................... TATCATAACCTTTTTGTTATCAACGATATA 52039 36 100.0 30 .................................... GCATGCAGACGGATTTAAAATGAACGTTTG 52105 36 100.0 30 .................................... CATTCAAATTAAAGGAGATACAAACACATG 52171 36 100.0 30 .................................... CATTAACCGCATGGAAAAAAGGGCTTGTGG 52237 36 100.0 30 .................................... AGTTTATTTCTATTTCAATAATTCCATGCC 52303 36 100.0 30 .................................... CAACCCAAACGAAATATAATCCAAGTAATC 52369 36 100.0 30 .................................... TTACCGTTAAAGTAGCATTCAGCCCTTCTA 52435 36 100.0 30 .................................... CAACGATTGGTTCATTCTATGGTTGGTTAG 52501 36 100.0 30 .................................... AACGAGGAACAGTTAACACATTGGTCTTTA 52567 36 100.0 30 .................................... AACTAATGAAAACATTAAATACAATTGGGT 52633 36 100.0 30 .................................... CGATGTAGTTATTCGAGAAACTAAAGCGAC 52699 36 100.0 30 .................................... CAACGGCCAAAAATATTGGAGATTTGTGGT 52765 36 100.0 30 .................................... CATTGGAAGAGACAATGACTGACGAAGAGT 52831 36 100.0 30 .................................... TTTAGATATGATAAATTCCTTGAATATTGT 52897 36 100.0 30 .................................... ACAAAAAAGGAGAATTCAATTATGAATGAA 52963 36 100.0 30 .................................... ACAACGTACGCAATCAATTGAGAAACTTTG 53029 36 100.0 30 .................................... TCGATGAAGCTCAAAAAGACGCTGACCAAG 53095 36 100.0 30 .................................... TACAGCGCATTGAAAAACAACAGTAAAGTG 53161 36 100.0 30 .................................... TTGTTATTCCTAATAAAACGCCAATTAGCG 53227 36 100.0 30 .................................... TCTATTAACTGCGTTTCTGTCATTGGACCC 53293 36 100.0 30 .................................... TCAATATCTGCGCCGTTCCGGTAGTCTTCT 53359 36 100.0 30 .................................... GAGGAAAAAGAATGACAAAAACATTAATGT 53425 36 100.0 30 .................................... AAGGGGTTGAGATTAGACCCTTCTCAATTT 53491 36 100.0 30 .................................... TCAAACTCTATACAATACATAAGAAAATCA 53557 36 100.0 30 .................................... ACACAACTGTTAAGTCACTCTTTGCCAATG 53623 36 100.0 30 .................................... ATTCTTTATTTATTGAAGATGATTTCAGAG 53689 36 100.0 30 .................................... CGGCCTTTTAAAAATTCTATGTCTGCTTTT 53755 36 100.0 30 .................................... ATAATATTTTCAACACTCTGCTTCATGCTA 53821 36 100.0 30 .................................... AAATTATACTGGGATTGATTTGAATACCAA 53887 36 100.0 30 .................................... TGGACGCTAATTTGATCCAACAGTATTGGG 53953 36 100.0 30 .................................... CATATTAGTTTTATCTTTATCAGCTCTAGC 54019 36 100.0 30 .................................... TTTCATATCCTTATTAATGAGTATCTTTCT 54085 36 100.0 30 .................................... CTGATATAATTCATTCATTAACTAAATTGA 54151 36 100.0 30 .................................... TTTTCTAATTCATTTAAAACATTCCCTTGT 54217 36 100.0 30 .................................... CATTAGTTAAATCCTCCTAGACATCCCTAG 54283 36 100.0 30 .................................... ACTCAATATAATAATAATACCATATCAAGG 54349 36 100.0 30 .................................... GATGACGATATGTTGAATCCAAGTGTTATC 54415 36 100.0 30 .................................... CGGATTTCGTAAATAAGAAAACTGCGGTTT 54481 36 86.1 0 ........................A.T...G.A..T | ========== ====== ====== ====== ==================================== ============================== ================== 42 36 99.7 30 GTTTTAGAAGAGTATCAAATCAATGAGTTTATTAGC # Left flank : ACTATTGATTTGAATAAATTATTTCAAAGTAGATTAACGAAAAAAATTATTGGCGATTTGAGCGATGGACAAATCCAAAAGTTAAATCAATTGGACACGGAAATGCGCACCGCCATTTTGGATATTGCTTTTATGTACGATATATCTCTAGACGTCAACCAAGAGTGGGATATAGCAAGAACAATTAAATTTTTTAATTTAACATTTTCTAATGTCGTTCAAGGTAACTCATATGGTATAATAGAAAGTATAGTATTAACCGCTTCAGAATTAAATGAAACAAAAATTATCGTGTTAATGAACGTTTCGCACTATCTTAGTATCAGCCAATTCAACGAATTGGTAAGACTAGTTGCGACATTAGATGTAAAACTCTTTATCATCGAATTTTCAGAAATAATTGATGCAAAAAAGTATCAAAACTGCCGGTATTATCATATTGATAATGATTACATAGAGTGGCGATACGAATAGTATGAATATTTCATGAGAAAAAAGCG # Right flank : TTTTGTGTATTAAAATGGATTCAAGAAAGGGCAGTTAATGCCTTTCTTGAATCCATTTTTTATGTCGTCTGCGCTAATTATAATAGTATAAAAAATATAGATTAAGTTACCACATTTTAAATAAATGGCATCATAATCTCAGAATTTTCAGGTCTACGATTTACTTCTAACATCGCGATTTGATGGATAATACTAGACAACGTTATCTGACCCATTTCTTTCTCAATAGTTTCTTGAAGTAACGCATATTGTTCAGATAAGACGTCTTGAATGTTACCACCAACAAAACAAGCGGGATTTGTTTTAGGATCCACTTGAATTAAATTGGTATCATTTTCGATACTTTTATAGATATCTAATAAACTAATTTCTTTGGGTGACTTCGCAAGTAACGCTCCAGCTTGCCCATTAGTAGTGATAATCAAATCAGATTTTTTTAAACGACTCATAATTTTTCTGACATTTGACGGATTCGTTTCAACACTATCTGCGATATTTTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGAGTATCAAATCAATGAGTTTATTAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTTTAGAAGAGTGTTAAATCAATGAGTTTAGAACC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //