Array 1 122-626 **** Predicted by CRISPRDetect 2.4 *** >NZ_AYGY02000060.1 Martelella sp. AD-3 contig60, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 122 33 97.0 34 A................................ CTCTTCGGTGTGCCGGTCGGCAGTCTTTCCGGCG 189 33 100.0 33 ................................. ACCCGCAAGCAGCGGGCACAGATAGCCCTACGC 255 33 97.0 33 G................................ CTTAAGTTGCGGCGGTAGTTGCGCCACGTCTGG 321 33 100.0 35 ................................. GGCCCGAAATAGGCAACCCTCGTCATGGTCTTGTT 389 33 97.0 34 G................................ CTCGAGGAAGCGCGCGCCAAGGTTCCGGTATGGG 456 33 100.0 35 ................................. AGGTTACAGCGGCATCGGCAACGGCCGGCGCTGCT 524 33 97.0 33 A................................ AGTGAAGTCATAGTAGTTCCGAAGCGGATAGCC 590 33 87.9 0 G............................GC.T | T,TA,T [613,615,618] ========== ====== ====== ====== ================================= =================================== ================== 8 33 97.0 34 CGTCGCCTCCCTCGCGGAGGCGTGGATCGAAAC # Left flank : ATCGGTGGTGTCCTTCAGGTTGGTCATAAGCAACCCGACCCTACCGGAAATCACCGATGGCTATGAAATCCAGCTACACCACGTCATGGGACACGATCCTTCCTGATGCTGAGCGGTGGTGA # Right flank : TCGGCGTTCGACGCCGATCAGCGCGCTAAGTTTTTGAAAGATTTAACGCATGTGGGGTCCCGGTGTCTCGCTGAATGACAGCTCTGCGATGGCGGGACTGGCGGCGTTCCTCGGCATGATGTCGGACGGTCTCCTTCAGGACTTTGCAACAGCGGAATTCTCCGATATGTTCCTTATTTGTTCTTTTCCGGTTTTGAGTGAATCGGCCTCATTGGCGGGTCCTGTGGACGGCGACCGAGACAGAACACCGGTGCGCAAGGCGTGCATCGTTGAATCACAAGGGCTTGAGGCAGAACGGTATGAGCGCGGCGCATCTCGAAAAATTGAACGACAACCAGCGGGCCGCGGTTCTGCATGGCACGGATTTGCCTGATGGCGCCATCGGCGGACCGCTGCTGATCATTGCGGGCGCGGGATCCGGAAAGACCAATACGCTTGCCCATCGCGTGGCGCAGCTCGTCATCTCCGGAACCGATCCGCGCAGGATCCTGCTGATGACC # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGTCGCCTCCCTCGCGGAGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CGTCGCCTCCCTCGCGGAGGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.50,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [46.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 9185-11676 **** Predicted by CRISPRDetect 2.4 *** >NZ_AYGY02000192.1 Martelella sp. AD-3 contig192, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 9185 33 97.0 35 A................................ GCATATGATGTTGGCGACAGCATCTCCAACTTTAA 9253 33 97.0 33 T................................ CGTCGCGCAGCACTCCGTCATGGGCGCCGAGGC 9319 33 100.0 33 ................................. TCGGAAAATGCACTGTCGATAGAGATGCGGGAC 9385 33 97.0 33 C................................ GCAATTTGGGTAACGTTCGGCCCTTCGACAAGC 9451 33 97.0 33 T................................ GAATTGCGATGGCTGACTGCTTACCCGTCATGG 9517 33 97.0 34 C................................ ACCCTTACGCGGCAGTGACGAAGAACCTCGTTCA 9584 33 100.0 34 ................................. ATTGCACGGATGGCGGCGGCCATTGCTTCACGCA 9651 33 97.0 35 C................................ GTCCAAACATCGTGTCACTCCTCCATGTCGTTTCC 9719 33 100.0 33 ................................. AATGCTCGGCATCGGTATATGCTGATTGATGGA 9785 33 100.0 34 ................................. GAGGAAAAGCTCGGAATGAAATTCAGCAGCTGGC 9852 33 97.0 32 A................................ CAGTTGACGTTGATACAAATTTAGCCGAAGCC 9917 33 97.0 33 C................................ ATATCAAGGTTGACGGCAGGAGCATTTACGTTT 9983 33 100.0 33 ................................. ACGTAGGCGTCGGGGCTGGACGCCACCGAGACG 10049 33 97.0 33 C................................ GACTGCAAAGTAGACTGTCAAGCCACTGCCGAT 10115 33 97.0 35 T................................ TGCGCTTTATGACGCCAGCGGCAACATCATCAAGC 10183 33 97.0 34 T................................ GACTGGATGCATGTTCAGGCGGCGAGGTTGTAGC 10250 33 100.0 32 ................................. AATTTTGTTGGTACCGTGGCCGAGGCAGCCCC 10315 33 100.0 32 ................................. AATTTTGTTGGTACCGTGGCCGAGGCAGCCCC 10380 33 100.0 33 ................................. TGCAGATCACCGCCGATATCCGCATGGCCGTGG 10446 33 97.0 33 C................................ TGCGTGGTTGTCGCTGCGGAGAATGCCACGGCA 10512 33 100.0 34 ................................. CTTGCCGACCGCAAGTCCGAACAGCGCGCCTGCA 10579 33 97.0 33 C................................ TTGTCCGGCGCCTGTTTCATGGTCGTCGCAATC 10645 33 97.0 34 T................................ TCCAACGTCAACCGCTATGGCGGCGGCTTTTCCA 10712 33 97.0 32 C................................ GCCGTCCGATCCGGCATTAGCGAAATAACAAT 10777 33 97.0 34 T................................ AATCCGAGATGCAGCGCTTTGCCGATCAGGTTGA 10844 33 97.0 33 C................................ TCTTCTCCTTCGGCGAGCGCCTGCGGAAGAGTC 10910 33 100.0 33 ................................. TTCAGCGTCGGCAAAGACAGGCAAAGCGCCTGA 10976 33 97.0 33 .......A......................... ACCAAACCTATAGCACACTACGCAAAAGGGCCT 11042 33 97.0 33 C................................ CTCGTCAAAATCTGGCACTTTCGCCTGCGCGAG 11108 33 100.0 33 ................................. TCGACGACAACAACGAGCTCTTCGGCCGGGCTG 11174 33 100.0 33 ................................. TTGGAGTACGGCGAATAGTGCGGCCCGATGTAC 11240 33 100.0 38 ................................. CATGGTGACGGATTATCGCCAGGGCGAGCGCGTGCAGA 11311 33 97.0 34 A................................ CTGCGTATCCACCGCCACCGCCACCCTCACCGGA 11378 33 97.0 33 A................................ ACAACTCATCGAAACCCGTTGACCGCACCGCCT 11444 33 97.0 35 C................................ AGTCTTGAGGTAGTCGGTGATGTCCCACTCACTCA 11512 33 100.0 34 ................................. ATGATCAAAGGGCGAGGCTGTCGCGTCATCCGCC 11579 33 97.0 32 T................................ AATACGAGCACCTGGACGGACTGATCAGCGCT 11644 33 97.0 0 A................................ | ========== ====== ====== ====== ================================= ====================================== ================== 38 33 98.1 33 GGTCGCCTCCCTCGCGGAGGCGTGGATCGAAAC # Left flank : TTCTGGTAACCTACGATGTGCGCGTGAGCGAAGGAAATGGCGCTGCCCGGCTGCGCGCTGTTGCCAAGGCCTGCCGTGATTTCGGCCAGCGGGTGCAATATTCTGTCTTCGAGATCGAGGTCGATCCGGCACAGTGGACCAGGCTCAAGGCCCGGCTGGAAGGCATCATCAAGCCTGAGATGGACAGTTTGCGGTATTATTATCTCGGCGCCAATTGGCAAAGGCGGGTTGAACATGTCGGCGCCAAACCGGCGGTCGACCTTAACGGACCTCTGATGATCTGAAATCCCTGACGTCCGCCGCGCCGAGGTTTTGGGGAGATCGGCGCGAACCACAAGAGTGCCGCAATATGCCGGGAGGTTCGCACTTCCGTCAGTTCTTTGAAATCGTTTATTTTCCCGAAAATTCTTCGAAAAAGAACATCGTCATTCTGCAGCGCCGGTCCGTGTTCGCGATGTCAGGTTGCATTGCCCTGTCTAAATAGGCCCTTATAGTCAGCC # Right flank : CAGTCTGCCGCTTCCTGAGATCGTGTCCCATGACGTGGTGTAGCTTAGACGACCACGGCTCATCCCAGAGGGGCGGATGAGTGTCAGCTTGCTGCTGGCAGGCTGATGAGCGGA # Questionable array : NO Score: 5.66 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.50, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTCGCCTCCCTCGCGGAGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CGTCGCCTCCCTCGCGGAGGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.50,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //