Array 1 3546-3314 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZTB01000102.1 Caloranaerobacter azorensis H53214 contig102, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 3545 30 100.0 37 .............................. GTAAAAGATACAGCAAAGAAAGAAGCATGGTCTAATA 3478 30 100.0 36 .............................. AACTTCTAATTGCTATTGTTATATCACCACTGGTTG 3412 30 100.0 38 .............................. AGTCCTATTTTGGCTATTTTGGCGATAGTTTTGTTAAG 3344 30 96.7 0 .............................A | A [3318] ========== ====== ====== ====== ============================== ====================================== ================== 4 30 99.2 37 GTTTATAGCTTACCTATAAGGAATTGAAAC # Left flank : TATAAGGTTTTTATAGATATAAGTCAACGGCTATTATTTAAGAAGAAAAATGGTATAAATCCACAAAGAGTATAAAAGAGCAGTAAATACAGCTAATAAAGAAAATTCAATTGCTTCTTCAAAATGTCGTCGACCTCCAGTAGTGCAAAAACCCCTGGGGATCGACGACATTTTGTTTTTTGCACAAAATGTGCAAATTTCAATATATAGAAGGGTGAAATCCTAGTGTATTAGTAGGGATTAACATAAAAAATCAATAATTGACAAAATTTTTTAAATATAGTAATATCAATATAAATGATGG # Right flank : TATTGAATGTGGTTGATGATAATATTGTACTATTATGTTTGTAAATGTTTACATTTTTTAATTCATTTATCTATTATCAGGGGGTGAGGGAAGTATGAAATATATAAATGCTCTAACATCAATATTCGGTGGAAGTATGAAATATATAATCGTTTTAACATCAATATTTATTGCTGCTTTATTGCTGTATTTAGGTTTTCATTTATCTTTCTTTGTTGTATCTTTATGTTCAGGTAAAGAAGTTGTTAGAATACCATTTACCCATCACTACATAGCCAAAATAAAACCTTCAGAATGGGAAGGGCCTGAAGCAGTAAATCACAAATATTTTTTTAATAAATTCATAGAAGAACAAAATAAAAAAGGTTGGAAATACAATCCTGAAAAAAGACTAGGCCGATTGATAATTTTCGAAAAAGATGGTAAAGTTAAAGGAATGTCATACCCTAGATTTATAGGAATTAAATGGTAAGGAGGCAGACATTATCTGCCTCCTTATT # Questionable array : NO Score: 8.82 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATAGCTTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-85.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 1 2584-856 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZTB01000103.1 Caloranaerobacter azorensis H53214 contig103, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================================================================================================= ================== 2583 30 100.0 36 .............................. CTTCATTATGATATAATAAAAATATATTATAAAGGA 2517 30 100.0 36 .............................. TTGAATTTTCCTTGAAACTCTAATACCTGCTGACTC 2451 30 100.0 38 .............................. CCTGTTTGAACAATCCAATTCACAAAGGCTTCGTGGTC 2383 30 100.0 38 .............................. AAAATGACAAATAGTTTATTATTAATTTTTGTTTTAGT 2315 30 100.0 39 .............................. ATATTTCTATTCTTTTACCTTTATAATAATTTACTTTTT 2246 30 100.0 39 .............................. GTTTAAAAGCATTAGTTTAGGAAGCTTCTTTGTCGCTGA 2177 30 100.0 37 .............................. CTTCACTCCAATTATTGTAATAATCTCTTGATGGTTG 2110 30 100.0 39 .............................. CTACAATCTTCAACTAACTCATTATATTTATTTTTTATC 2041 30 100.0 38 .............................. AGAAAAGAAATTGAAAATTGGTTTGAGAATAAGGGTGT 1973 30 100.0 38 .............................. ACAATGGATGTCTTTCAACATATAAACTTTCAACAATT 1905 30 100.0 36 .............................. TCTAACCCTTTAAATAAATATTAGTCGTTTCTATTT 1839 30 100.0 38 .............................. TAGTCAGTAATAGTGCCTCTCTTGAGACCTATCTGACT 1771 30 100.0 37 .............................. AAGATAAAAAATATCAAAAATATTGATAGAAGAAGAG 1704 30 100.0 35 .............................. ATAATTTCTCTTTCAAGCCCTTTTTTATATTCATC 1639 30 100.0 38 .............................. TTAGACATCTTTCTAATATTGAGTCTGGTATAAAGTTC 1571 30 100.0 39 .............................. CAGTAAATGGAGCGTTTTTGCATGCTAAAATGCTGTAAG 1502 30 100.0 37 .............................. GAGAAATATATTAACATAGTAACTATAGTTGGTAATG 1435 30 100.0 35 .............................. CATCTTTACCCATAACAGGAATTTCTACAAGCCCT 1370 30 100.0 36 .............................. ACTATCCTGTATTATTTATAACAGAGGGAAAATTCA 1304 30 100.0 38 .............................. GTACCTATTTCTTCTGCATCTCCTTCTTCTTCATCAAT 1236 30 100.0 38 .............................. GAAGAAAACCAAGCTGCATTTTCTTTACACGACGTAAA 1168 30 100.0 35 .............................. CACTGACCTACAAATAGCATTATTGCACTACCTCC 1103 30 100.0 37 .............................. TATCCTTCTACCTCTCCACTATCGTCAAACGATAATG 1036 30 96.7 121 ......................G....... AAAAATATTCATGGGGGATGTAAAATTTATGGTAAAGTATATAAGTTTAGTAATAAGTATAATAGCGTTAGTAGTAGCAATTAAAGCTTACAATGAATCAAGAAATCATTAGTATTAGTAT 885 30 76.7 0 .AAAT...TT.........A.......... | ========== ====== ====== ====== ============================== ========================================================================================================================= ================== 25 30 98.9 41 GTTTATAGACTACCTATAAGGAATTGAAAC # Left flank : CTTACGATATAGAATTCCACGAAACAGTAGTTTTATATTAACTATGTGGAATGTAAATCTACCAGTCGCAATTCTACCATCGTATATAGTTCCACGTTTTATATTAACTATAAAAACTACATAATTGATTTTTTTAGAACTAAAAAACTAAGCATAAGCGACAATTTATTAAAAATGAAATTTTAAATTATTAGATGAGTTAGGAACATCAATTTGAGATAAAGTCATTTCTAAATTTTGCTTTTTATTGAAATTTAATTTTAGAAACAGAAATTGAACAAGATTGGCAAAGCTAAAGATTAAAATTAAAAAGATAAAAATGTCGTCGACCTCCAGTAGTGCAAAAACCCCTGGGGATCGACGACATTCTGTTTTTTGCCAAAAACGTGTAAATTTCAATATATAGAAGGGTAAAATCCTAGTATGCTAGTAGGAATTAACACAAAAAATCAATAATTGACAAAATTTTTTAAATATAGTAATATCAATACAAGTGATGG # Right flank : AATATCAGATGCAGTTGATGAGGAAGGAATTATATCAATCAGGTTTCAGAGATTACCTCTCATTACTTCCTAAATAACTTGCTTTGTATATTGTGTATTGATTGTTTATATTTATCGGCTTTATTAAATGATTTACTTGCTTTTTCATCTTTAACGTTATATCTTTTATCCTTATTGGGTTTGTTGTCCCTGCTACTGGGTCTTCTTTCGGATATGTCGGTATATCACTTATCATTATATTGAAAGAATGAAGAATTAAATTTGTAAATTATATAAAAAAAGATTTTATTTTCTGTTATTAATAGTTAGTTTTTCATAATAATAAAATTTTTAGTTATTTAAATTTATAAGTATTAAAAATTACAGAAGGCGAGTATTTAGTAGAAATTAATTATAAGTTAACTTTGAGGAGTTGTATGGAGATGACTGATTTAGATAGATTAATTGAGTTATATGGGATGGATGTAACAGATGATTTAGAGGTAAGTCCATTTGAGTAT # Questionable array : NO Score: 8.89 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:-0.31, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATAGACTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA // Array 2 3514-2959 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZTB01000103.1 Caloranaerobacter azorensis H53214 contig103, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 3513 29 100.0 35 ............................. CGTCTAAATTGACTCTTTCACCTGTTTGATACAAA 3449 29 100.0 36 ............................. AAGCAAGATAAGGTGTATGAGTTTCAATATGGCGAG 3384 29 100.0 37 ............................. AAATAGCCCCCAGTATAAATCCTTCTGCATTACCTGT 3318 29 100.0 36 ............................. TCTATGGATACAGTTGTTTAGTACAGGAGATAAAGA 3253 29 100.0 37 ............................. TCACCTTCAAGTACAATTTCTCCAGTATCTTTATCTA 3187 29 100.0 36 ............................. AGCCAATTTCATTGAGCATCTTGCTCCAGTTCTCAT 3122 29 100.0 39 ............................. ATAGAAGAAACTTACGATATAGAATTCCACGAAACAGTA 3054 29 100.0 37 ............................. CTACCAGTCGCAATTCTACCATCGTATATAGTTCCAC 2988 28 79.3 0 ................AAA-...AC.... | T,C [2962,2967] ========== ====== ====== ====== ============================= ======================================= ================== 9 29 97.7 37 GTTTTATATTAACTATGTGGAATGTAAAT # Left flank : CAAATTTACTCTAAACTTTTGACACTACGAATAAAAGAAACAGCGGAGATATATGACACGCTTATA # Right flank : TGATTTTTTTAGAACTAAAAAACTAAGCATAAGCGACAATTTATTAAAAATGAAATTTTAAATTATTAGATGAGTTAGGAACATCAATTTGAGATAAAGTCATTTCTAAATTTTGCTTTTTATTGAAATTTAATTTTAGAAACAGAAATTGAACAAGATTGGCAAAGCTAAAGATTAAAATTAAAAAGATAAAAATGTCGTCGACCTCCAGTAGTGCAAAAACCCCTGGGGATCGACGACATTCTGTTTTTTGCCAAAAACGTGTAAATTTCAATATATAGAAGGGTAAAATCCTAGTATGCTAGTAGGAATTAACACAAAAAATCAATAATTGACAAAATTTTTTAAATATAGTAATATCAATACAAGTGATGGGTTTATAGACTACCTATAAGGAATTGAAACCTTCATTATGATATAATAAAAATATATTATAAAGGAGTTTATAGACTACCTATAAGGAATTGAAACTTGAATTTTCCTTGAAACTCTAATACCTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 25-328 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZTB01000133.1 Caloranaerobacter azorensis H53214 contig133, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 25 30 93.3 38 C.A........................... TCATATGCTTTAGTTATTGTCTCAATTGTTCTATCACT 93 30 100.0 37 .............................. TGGGAAAGGTAAAAGGCTACATTCTTTTCAAAGATGA 160 30 100.0 38 .............................. ATATTTTGGATGCTGATAGCTTATTGTTGTATAGTTAT 228 30 100.0 37 .............................. TTCTATTTGCTCTCGATTTTTTTTATAAATCATTTCA 295 30 90.0 0 .................G.......T...T | GA,A,T [315,321,325] ========== ====== ====== ====== ============================== ====================================== ================== 5 30 96.7 38 GTTATTAGAGTACCTATAAGGAATTGAAAC # Left flank : TCGGCTGCTTAATTTTGCAACTTTC # Right flank : TAGAAAAAGAAAAATATATAAAAATAAGTTCCGTTTTAAACGGATCTTTTTTTATATATAAAAATATTTCCAGGGCAATGAAATGACTATAATTAAATAATCATGAGTAAGAAATAACTGAAATAAAGCTAATATTATATTTCGAATTATTAAAAAATATTAAAATTTCTAACAAATTATATTACTTCATATTATCTTAATAATATAATTAATATTAAGAGAGTATATAAGAATAAAATTTTTCAAGTTATGTTTTTTTAATTACCTTAAGTAATCGAAGGGTTAAAAATCACCAAAAAATAACGAATGGAAAGGAGTATTAAAATGCAAAAGAGAATGTTGACACCGTCAGAAATAGCTCAAGCTACCATTAATGCAGGTATAAAAAAAGCTAATTTATCAGCTCTACAAATGATTTTATTGGGTATTTTTGCAGGTATTTTTATAGGTTTTGGAGCACAAGCAGATATTACTGTTATGCAAACGTTAAAGAATGTTGA # Questionable array : NO Score: 8.77 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATTAGAGTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.68 Confidence: HIGH] # Array family : NA // Array 1 450-83 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZTB01000160.1 Caloranaerobacter azorensis H53214 contig160, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 449 31 90.3 37 TC.A........................... TCATATGCTTTAGTTATTGTCTCAATTGTTCTATCAC 381 31 96.8 33 T.............................. AGATTGCTTGATCGACTCGAAGACTACAAAGCA 317 31 100.0 37 ............................... ATCCTTCTTCCACTGGAATATATATGTTCCAAGTAAC 249 31 100.0 38 ............................... ATTTTAATAACATAATCTCCATCGAAATGTTCAGGAAT 180 31 100.0 36 ............................... CGTTCAACAGCAGCAGGAAAAAATATAGCGAACAAG 113 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ====================================== ================== 6 31 97.9 36 AGTTATTAGAGTACCTATAAGGAATTGAAAC # Left flank : TATTGAAATATGATTATTTTACTTTTATTACCAATTTTAGCCTATCGGCTGCTTAATTTTGCAACT # Right flank : CTTCTCCTCTATCTCCTTTAAAGAAGAAGATAGACCCATGTTATTAGAGTACCTAGTTTGTTGCAGAACTCTGCAACCATTGT # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTTATTAGAGTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.5 Confidence: HIGH] # Array family : NA // Array 1 33507-34672 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZTB01000020.1 Caloranaerobacter azorensis H53214 contig20, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 33507 30 100.0 38 .............................. TTTCAATAAAAAGATTGATGATAAAGGTCGACATGAAG 33575 30 100.0 38 .............................. GACATAAAGTTAATTATTTTAACTCCCAAGTTTATATC 33643 30 100.0 35 .............................. GTAAATCCATTTCAGGAACTTGTTTGTTTTGTTCA 33708 30 100.0 36 .............................. ATACATTCATTATTTATAAAAATTTTTTTATTCCTC 33774 30 100.0 36 .............................. TCAGTACTATCATTTAATATATAACAGAATTGCATG 33840 30 100.0 35 .............................. GACTATATGAGGTCTTTCTTTTCAGCGGAAGACCT 33905 30 100.0 35 .............................. TTTGTTCTTGTAGCAAAAAATACTTTTGCTTTTTT 33970 30 100.0 36 .............................. TACAGATGAAGAATTAAAAACATTATATCCATAAAA 34036 30 100.0 40 .............................. AAGACTCTAGCATTTTATCTGCGGCGTTTTCATATATTGC 34106 30 100.0 38 .............................. CAGAATGGGATAGGTCAGTAACAACTGTCCTATTCCCT 34174 30 100.0 36 .............................. AAGAAATAGAAGAAGAAAAGAAACAAATAGAAGAAG 34240 30 100.0 38 .............................. CCACTATACTTACTTTTTCTTCTCTTTCTGCATTTAGC 34308 30 100.0 37 .............................. TATAGTAAAAATGGTGAGCTACTCAATCCAACTCCTT 34375 30 100.0 36 .............................. ACTTTATTGCTAGAATGTGGGGGATACCTTTCCCAT 34441 30 100.0 37 .............................. TAGGTTTCTTAAGTTTGAAGCTTTTCAGAATGAAGTG 34508 30 100.0 39 .............................. CCGTTTGAATTGCCGAAGGTGTATGTTATGCCTTCGGCG 34577 30 100.0 36 .............................. TTTTTAAAGTCTTACGCTGATACGCAGTAATACCGT 34643 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 18 30 100.0 37 GTTTATAGACTACCTATAAGGAATTGAAAC # Left flank : ATTTTAGACGTTTTACATTGAACCTTGATATATCAGAGATTTTTAAGCCGATAATAATTGACAGATTAATATTTACTTTACTTTCAAAGAAGATGATAACTAAAAATGATTTTGAAGAAGATATGGGCGGTATACTTTTGAAAGATAAAGGTAAAAAAGTTTTTGTAGAAGAGTTTGATAAAAGATTAAAAACGACAATAAATCATAGACAGTTGGGAAGAAAAGTATCATATAGAAGACTTGTGCGAATGGAATTATATAAGCTTGAAAAACATTTAATAGGCGAGAGTGAATTTGAGCCTTATATATCAAGATGGTAATGTCGTCGACCCCCAGTAGTGCAAAAACCCCTGGGGATCGACGACATTTTGTTTTTTGCCAAAAACGTGTAAATTTCAATATATAGAAGGGTAAAATCCTAGTGTACTAGTAGGAATTAACATAAAAAATCAATAATTGACAAAATTTTTTAAATATAGTAATATCAATATAAGTAATGG # Right flank : TCATAGATGATGGGAAAATAAAAATAAAGACCAGCTAATAAAAGTCAAGAGT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATAGACTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [85.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 1 4821-3560 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZTB01000064.1 Caloranaerobacter azorensis H53214 contig64, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 4820 29 100.0 37 ............................. AACTTCTGTTGAATTTTATATTTAAGAGCCTGCTTAT 4754 29 100.0 35 ............................. TAACGAATGCTTCTGGCTTGTCAAGATAATAAAAG 4690 29 100.0 37 ............................. TTAGTTTTAAAGTCTTATGAGGAAATAATATTTTATG 4624 29 100.0 37 ............................. CATTCTGTCAAGTGCATCAGTAATATCTTCATCTGTG 4558 29 100.0 36 ............................. GTTAATGCCCAACATTCATCGAACTGAACAAGTTTA 4493 29 100.0 37 ............................. TTATGAAAGTCAAGTCCTCATCATTCATTTCCTGCCT 4427 29 100.0 37 ............................. TTTGAACTTACTGTAAATATGTCATTAATGGCTACTC 4361 29 100.0 36 ............................. AATTCTCATTTCTTCTTTGTTTTCTTCTAAATATTG 4296 29 100.0 35 ............................. TTGAGGAGCTTTCTCAAATACCCAATAATAAGGGT 4232 29 100.0 35 ............................. AGGTTAATTTATTGGAAGATAATAGATATATATAG 4168 29 100.0 36 ............................. ATAAAGAAATATGAAATATGGAGCAAAATGCTTAAG 4103 29 100.0 35 ............................. TTGAGGAGCTTTCTCAAATACCCAATAATAAGGGT 4039 29 100.0 35 ............................. AGGTTAATTTATTGGAAGATAATAGATATATATAG 3975 29 100.0 36 ............................. ATAAAGAAATATGAAATATGGAGCAAAATGCTTAAT 3910 29 100.0 35 ............................. TCGTTGGTCAGCTTTTTGACTTTTTTTCAGCTGTG 3846 29 100.0 36 ............................. GAGAAGCAAGTCCACGTTTTTTCATATCGTCTTTGC 3781 29 100.0 36 ............................. AAATATGATGACGAGGATTAGACAAGGAGAGTTTAC 3716 29 100.0 35 ............................. CAAAACTCACAGAAAAACAACGCTGCAAACAATAA 3652 29 96.6 36 ............................T AGCGTAACTTCGCTTACCATTTTAGCATTACAACCT 3587 28 93.1 0 ...................-.....G... | ========== ====== ====== ====== ============================= ===================================== ================== 20 29 99.5 36 GTTTTATATTAACTATGTGGAATGTAAAG # Left flank : GAAAAAAGTGATTGGTATTGATAAAAGTTTTGATGATATTTTTTTATAATTCATAAGAAATTATAATAAAATATTATATTTTAAAGATTTAATATCGATTTCATTGAAACTTTATCTGGAATGTTTACATGCTAGAGTCATTATAAACAGCATTAATTTGTGGATAATTTTGAATATAAATTATGTAATGGATATAGCAAAATCTATTCTAAATTGTTTAAATCGAAGATTTTGTTTTAATATTTTGTTTTAAACAAAATCATTTTTAGGATTTATTTAACCTGAAAATTTTATTTCCAATAGTTGGAAAGATTTTATAGTTGCAGTAAAGCGGTTTTGATAAAAAAGTTATAGATCTATTGAAATATCTTAAACAAAAGGCTCTAAATTTATATTACAAAAAACATTACTATAACTTTACTGCAAAAATACCAATCATAACTAGATTTAAGTATGTTGTAAGCTTTCAAACTTCTTATAGGCGGTTATTATAAAAATGG # Right flank : TTTAATCTTATCAAATTAGATTGAGGTGGTGATTAAAGTGGAAAAAATAAAATCTGTTCAATTGTTAATTAATCAATTTTCTTTAATTATTGCGACAATATTTTTTGTTGTTTCATGTTTGTATAAAAATTTTTGGCTCATTTTAATAGGACTTGGGTTAATCTTATATACTTCTGATAAGATAAAAAAATCAAAGGAGAAATAATTATAAAACGTGAGGAATTAATTAAACTAATTCAAAAAGAAACAATAAATTCAAAAGAAATAATAGATTATTTAGGTATCAGCAAACAATGTTTATCAAATTTAAATAATTCTGATAAATTTATTGCTGTCAGAAAAGGGACTTATTTAATGTAAAAGATTATGAAATTAAAGTTACTGTGTTGCCTTTTTATCCTTGGTGTAGAACAGTTACTGCTTTATATTTTGAAGATGACTATGGACAAGAGATAAGGATGGGGAATTTATCATGTTCCAAGTGATATGAAGTACAAGGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGAATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 2237-2003 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZTB01000071.1 Caloranaerobacter azorensis H53214 contig71, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 2236 30 100.0 36 .............................. AAATTTTTTTGAGATCAAAGAAAAAAAGCAACTGTA 2170 30 100.0 38 .............................. ATACTTTATTTAATGTTTCTATCATATGAACAGGTATT 2102 30 96.7 40 .........................A.... CCTTCAATCATCCTATCTACTATCATATTTATTTTTTTTC 2032 30 76.7 0 ...C.C..C........C.......AC..T | ========== ====== ====== ====== ============================== ======================================== ================== 4 30 93.3 38 GTTTATAGACTACCTATGAGGAATTGAAAC # Left flank : TTTACCCGATAATTTAAAACAAATATGGTCTAATTTAAATCCGAAAGGAGAATTGCCTGTAGGTGAATTAAATCTTGTTAGAGATTGGATATTAAAAGAGTCCTATGAGGGAGAATATGTTCTAGTACAGGGTGAGTTTGGAGCAACATTTTATATAGTAGATTTTTGTTTTAAGTATAACAGGATACCAATTTATGCAACTACTGCAAGAAAAGTAGAAGAAACAAAAGTAGATAATAAAGTTATAACGAAAAGGGTATTTGTACATGAAAATTTCAGAAAGTATTTGAGATATAAAATTTAATTAATGTATATCAAAATGTCGTCGACCCCCAGTAGTGCAAAAAACCCCGGGGATCGACGACATTTTGTTTTTTGTCAAAAACGTGTAAATTTCAATATATAGAAGGGTTAAATCCTAGTGTATAAGTAGGAATTAACGCAAAAAATTAATAATTGACAAATTTTTTTAAATATAGTAATATCAATATAAGGAATGG # Right flank : AAATTCTTCTTTAAAGATACATCCAGCTAAATTTTTTAGATTATTTTGACAAGTCAAATAATTCTAGAAAAGGGGTTTTTAAATTGCGATTTAGAGATGTATATAAGAATAATTTATTTATGTTAAAATTTGTCTGGAAATACTACAAAATATATATAATTACCTCCATACTAATCTCATTCAGTTCTATACTAACACCATTAGCAGACGTTTTAGGGCCAAAATATATAATCGATTTCATAAGCCAAAAAAAACCTTTTACTTGGATAGTTACTGTCGTTATATTAATCTTTTCCATTGAAATATTAAAAAGTATATATTATTCATGGTATTATAAATTTATAACTCCAAGAGCTCATAATAAAATTAAAGGCGGCATTAACAATTTGCTTATGCAAAAGGCAGCATCTTTAGATTTAGAATGTTATGAAAATGCAGACTTTTACGACAAATACACCAGAGCTTTAAAAGAAGCGGACATTAGAGCATTAAGCGTAGTT # Questionable array : NO Score: 8.52 # Score Detail : 1:0, 2:3, 3:3, 4:0.66, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATAGACTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 1 208-46 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZTB01000078.1 Caloranaerobacter azorensis H53214 contig78, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 207 29 100.0 38 ............................. AGAAGAGTATTTTGGTAAAGGGGGAGGGGAAGTAGCGA 140 29 100.0 37 ............................. CGGGTAACTGCTCATTGAATACCGCACGCCCTGAATT 74 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 3 29 100.0 38 GTTTTATATTAACTATGTGGAATGTAAAT # Left flank : AAGATTTTATATATATTTTTAAAACAGTATTATTAGGATTTTAAGAACATTTTTACAGTTTTGAAAAAAGTATATAATATAATAATTAATCCAATTCTTAAAATTTAATTTCTTAATATAATAAAATTAATTATAGGTATTTTTAAATTTTAGCAAATAATACATTTAATAGATTTATTTTTGAAATTATTTGTTTTAGAAGTTTTATTTCAATTGTAATTTTTAGTATAATAATAGAATAGATGGTTGTGTTTTAGTTAATGAGTTTTTAGAAGTATTTTAAATTTTTTATTTACTATAATTAGAAAAATTTCACAGCTGCAGTAAAGTGGACTTTAATTAAAAAGTTGTGAATTCCATGAAATATCTTAATTAGATGGCTTTAAGTTTATATTTTAGAAAACATTATTATAGCTTTACTGCAGAAATACATATTATGATTGAAATCAAATATATTGTAAGCCTTTAAATTTCCTATAAATAGTTATTAAAAAAATAGG # Right flank : TTAAAAATAAGGAAGATAGAAAGTTGCAAAATTAAGCAGCCGATAG # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 921-226 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZTB01000091.1 Caloranaerobacter azorensis H53214 contig91, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 920 30 100.0 36 .............................. TGGAGATTGCTTTAGAGGAGGGTGCTACTGTAGGGG 854 30 100.0 35 .............................. TCTCACGATGAAAATAAAGACATATACTCGCAACT 789 30 100.0 36 .............................. AGTTACAACGCAGTAAGTTGATAAGTCAGCATTTCA 723 30 100.0 39 .............................. AGTATATTTGTATACCAGAATTTCAGAAACGTGGAGCAG 654 30 100.0 36 .............................. AAAGTAATCTAAATAGTAACGAAATAGCTGAAGATG 588 30 100.0 37 .............................. CCTAATTCTTGCAATTTTTTGATTGCAATATTCACTT 521 30 100.0 37 .............................. AATCTATTTCCATCTAACCCAAAACCTACAATACCTC 454 30 100.0 36 .............................. CATATTCTAATAGCTTGTTGATAATGTTTCATACTG 388 30 100.0 38 .............................. TACGGCCAAATGAAGGCTTATAGAGTAAATATAGAATT 320 30 100.0 35 .............................. CTGCAATGATAACAGGTTGCTTTTTTTTGCTGCCT 255 30 76.7 0 .......AAT.......A.......TT..T | ========== ====== ====== ====== ============================== ======================================= ================== 11 30 97.9 37 GTTTATAGTGTACCTATGAGGAATTGAAAC # Left flank : TGTATGATGTAGAACAGAAAAGAGTTGCTAAAGTTCTTAAAACGTGTAGAAAATATCTTTATTGGGTACAAAATTCAGTTTTGGAAGGAGAAATAACAGAAGCAAATTTAATAAAATTAAAGACTGAACTTAAAAGGATAATAAAAGAAGATAAAGATTCTGTTATAATATATAGATTTAGAACTACCAAATATTCTGCTATTGAAACATTAGGTGTTAAAAAAGGCGGAGAAGAAAATATATTGTAAAATAAAGTGAGAAGATACTTAAGATAAAATATGAAAGTTGTGGAAGTTATACACAGATAATACTATCAAAAATGTCGTCGACCTCCAGTAGTGCAAAAACCCCTGGGGATCGACGACATTTTGTTTTTTGCCAAAAACGTGTAAATTTCAATATATAGAAGGGTGAAATCCTAGTATACTAGTAGGAATTAACATAAAAAATCAATAATTGACAAAATTTTTTAAATATAGTAATATCAATATAAGTAATGG # Right flank : TTAACTATTTTTAACAGTCTAGGACATTGTTGTTTACGTGTTTATGTGGTATATAGGAGAGAAACGAATTAAAAAGTCTTACTGATCAAGAAGAAGATTCTATAATATTTTTTATTGCTAGAAGTGATAAATGGATTAAAAAAGAAATAATGGGTGTAGAAAAAAATTCAACAGATAATTTTATTTAATAATGTAAGGTAGTGTAAAAAGAAATATGAAAAGTTAG # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATAGTGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA // Array 2 3425-1588 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZTB01000091.1 Caloranaerobacter azorensis H53214 contig91, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 3424 30 100.0 36 .............................. AAAATGGGTTTACTCAAAAAGCTCTAGCTAGAGAGA 3358 30 100.0 36 .............................. CATATTCTAATAGCTTGTTGATAATGTTTCATACTG 3292 30 100.0 36 .............................. TCAAGAGTAAGGTATTCAGGGGAGGACTAATCCTCT 3226 30 100.0 39 .............................. GCGTCTTCTCCTTCCAGAAAAGATAATCCCTTTGGAATA 3157 30 100.0 36 .............................. AAATAAATAGGTCTATTGTTATCCCATCTGTCTTCT 3091 30 100.0 36 .............................. TTACCTTGCTCTTTTCTTCTTGGGTTTCTTTAATAT 3025 30 100.0 39 .............................. TATTCTTTCTTTTTTCTTTCTTTCTCTTCTGCGGATATG 2956 30 100.0 40 .............................. TAGAGACACGTTTGTCTCCAAAATCAGCTTTATTTTTCCC 2886 30 100.0 36 .............................. AAAATATGATTGAATGGGAAGGTGAAGGAACATATG 2820 30 100.0 36 .............................. AAGAATAAAAAGAATATTTATTAAAAATAAAAAAGA 2754 30 100.0 36 .............................. ACATCTGCGACATTGTTATTTCAAAGCTATACGGTG 2688 30 100.0 36 .............................. CTTTCATCTTGCTTCATCTTTTCAACATCAATAGGG 2622 30 100.0 37 .............................. CTGGTTGTCAAATCAGTAATAGAGATAATACTTGGAG 2555 30 100.0 36 .............................. TTTTTGAGATTGTCTCTTATATTTTACACACCTACT 2489 30 100.0 35 .............................. TTCTTATGACACATAAACACGATAAGTTAGCATTT 2424 30 100.0 36 .............................. TAAATAGCAATACCTGCAAATACTGAGCCACCACCA 2358 30 100.0 36 .............................. CGGGATGTTTAAAAACAAATGGAACTGTATTAATTG 2292 30 100.0 38 .............................. ACAATACATTTTCCGCTTGCAATAGCATCATCAAGCGG 2224 30 96.7 37 .........C.................... CCTGATAATGAATACATTACATTATCACAAGCTATTA 2157 30 93.3 36 .........C.....G.............. AAATATAGCTCCTAAACTGTGTAACATTTTATTTCC 2091 30 93.3 36 .........C...................T AAGTCAGCACTTTCTATCACAAAATCTTGCTGTGTT 2025 30 96.7 39 .............T................ TCTACATGGACTCTCTGAACTGTAGGCATATCTTTTCTC 1956 30 100.0 36 .............................. CGTTTTTAGATACTGTTACTATATATTACGTTCCAG 1890 30 90.0 39 ........TG.......G............ TATCCCATTTAATAATAGTATTATATTTGCTTTTTCTAG 1821 30 100.0 37 .............................. AAGGAAAGTTTTCTATACTTCTTCCGGAACCTTTTAA 1754 29 93.3 39 .......-.........G............ ATAAAAGTTTCTAATGGTTTCTTTAAACAATTTGTTAAT G [1745] 1685 30 90.0 38 ........TG.......G............ TAATATTCTTCTTGATTTATTGCATTTTGAATAACCTT 1617 30 96.7 0 .........C.................... | ========== ====== ====== ====== ============================== ======================================== ================== 28 30 98.2 37 GTTTATAGATTACCTATAAGGAATTGAAAC # Left flank : ATTGACAAATATATAATGTTTGTAATTATATAAGTTTGAAAAGTATTTAACAGGTGAAAGTCATATATTATAAAGTAGAATATGCAAAAAATGTTTGTTATACTTGTGTATGATGATGTAGAACAGAAAAGAGTTACTAAAGTTTTTAAAACATTGTAGAAAATATTTTTATTGGGTACAAAATTCAGAAATATTCTGCTATTGAAACATTCGGGGTTAAAAAAGGTGGAGAAGAAAATATATTGTAAAATAAAGTGAAAAGATACTTAAGATAAAATATGAAAGTTGTGGAAGTTATACACAGATAATAATATCAAAAATGTCGTCGCCCCCCAGTAGTGCAAAAATCCCTGGGGATCGACGACATTTTGTTTTTTGCCAAAAACGTGTAAATTTCAATATATAGAAGGGTGAAATCCTAGTATATTAGTAGGAATTAATACGAAAAATCAATAATTGACAAAATTTTTTAAATATAGTAATATCAATATAAGTGATGG # Right flank : ATAGAAGAGAATAAAATAATGGATAAAGCCAACCAACGAATGCTTATTTATTAGCAGGATTGGATTAAAATTTTAAATTTACAAATGATAGAATGAGTATTTATCTGATTTGAACTATATAAGTTTTAATGTAAAGTTAGAGGGTGTAAAAATGTTTGTTATACTTGTGTATGATGTAGAACAGAAAAGAGTTGCTAAAGTTCTTAAAACGTGTAGAAAATATCTTTATTGGGTACAAAATTCAGTTTTGGAAGGAGAAATAACAGAAGCAAATTTAATAAAATTAAAGACTGAACTTAAAAGGATAATAAAAGAAGATAAAGATTCTGTTATAATATATAGATTTAGAACTACCAAATATTCTGCTATTGAAACATTAGGTGTTAAAAAAGGCGGAGAAGAAAATATATTGTAAAATAAAGTGAGAAGATACTTAAGATAAAATATGAAAGTTGTGGAAGTTATACACAGATAATACTATCAAAAATGTCGTCGACCTC # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATAGATTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA //