Array 1 928-167 **** Predicted by CRISPRDetect 2.4 *** >NZ_RYVC01000010.1 Bifidobacterium pseudolongum subsp. globosum strain 1780B Contig_10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 927 29 100.0 32 ............................. TTCCCACAATTGAGTGACGATATTAAGAATGT 866 29 100.0 32 ............................. GGAAACAGAGTGCAATGGTATGTAGAAAAGTT 805 29 100.0 32 ............................. CAGGCCGCCACATCGACACAGACCATCGAAGG 744 29 96.6 32 ............................C GTGTTGAAAAACTCGTCGCGCAATACGGGGTA 683 29 100.0 32 ............................. TATGTGCCCTGAGTTGCTTTCATAATAAGCGC 622 29 93.1 32 ..........................T.C CTGGGGCATATCGACGTGGTGCTGCCGGTGGC 561 29 100.0 32 ............................. TTGGCCTTCCAGCCGTTGGACCTCATCGAGAA 500 29 100.0 32 ............................. CGTCGTAGACGCCTTCTCGTATGAGTTTCGCG 439 29 100.0 32 ............................. GAGGCCGGCGACACGATCAACGACGCGATCCT 378 29 100.0 32 ............................. AACATGCTCTACGGCACCTACCTCGACCCGTA 317 29 100.0 32 ............................. GACAAGATCGCCGGATTCTGCGGTGGAGTCCT 256 29 100.0 32 ............................. CACGGCGCGTACATGACGCCGGACACGATCCG 195 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 13 29 99.2 32 GTTTGCCCCGCATGCGCGGGGATGATCCG # Left flank : ACCCATCAACCCGTTTGCCCCGCATGCGCGGGGATGATCCGCGACAAAGCAACTGGCCCTCTCCGTACGACAAGTTTGCCCCGCATGCGCGGGGATGATCCGACGCCGGCGCTGATTTTGACGGCGGTGTCCACGTTTGCCCCGCATGCGCGGGGATGATCCGTGGTCGCGGATGCGTTTTTCGGCGTCCTTGGTGTTTGCCCCGCATGCGCGGGGATGATCCGGCTCCAACAGTTTTCGCAAGTTTTTGAGCTTGAGAGCGTCAGCTAGCCGCGCCGCTTGTCCTAGAGTCATGTTCGATACGGGGCGAACGCCCCGCTCGTACTCACTCAGGCGCTGGCGAGATAACCCCGCCGCGTCCGCGACTTGCTGCTGTGTCAAGCCCTTTGCTTGTCTTAATTCCAGTAGATTCATAGCGTCCCTCCCGGTACACTAATGATTCTACGGGATTGCCCGCACACCTTTTTCGACTGGCGGCGCTGCATGATTGCAGCGAGCTT # Right flank : GATCTTCGACGGGCTGCCGATGCCGAGCACGCCGTTTGCCGGCTCTTCCCTTTTGAGTGTGTAAGGGCCGTGCTCCATCATTTGTTGTGTGAATGATAAAAAGAATGGGGCACGGCCTGTCCCCGATTTTAGCGTGTTCGATGGTCAGTGCCTGTTGGGGTTGGACC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCCCCGCATGCGCGGGGATGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTGCCCCGCATGCGCGGGGATGATCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2026-1204 **** Predicted by CRISPRDetect 2.4 *** >NZ_RYVC01000010.1 Bifidobacterium pseudolongum subsp. globosum strain 1780B Contig_10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2025 29 100.0 32 ............................. CATACCGTCTTCGAGATTCGCGGGAATGGTAT 1964 29 100.0 32 ............................. ATCACTTGGCGGCTGTAGAAAACGCTGGATGT 1903 29 100.0 32 ............................. GAGCAATCATGGCTGACGGAAAAACCTTCACG 1842 29 100.0 32 ............................. GCGGCGGCCGCATTGCTCGCCGCTGATCCGTT 1781 29 100.0 32 ............................. ATCATACAGCCGGTTGATCTTGTCGCACGCCG 1720 29 100.0 32 ............................. GACGGCATATCGGCGTCCGACTATGGAAACCG 1659 29 100.0 32 ............................. AACTTGGTGCGTATGTTCGCGACTCCATGGCT 1598 29 100.0 32 ............................. ATACAAGAACACCCAGCCGGCTGTGCCGTACT 1537 29 100.0 32 ............................. GTCTTGCCGGAGTCGGGATCCTTGAAGAAGCC 1476 29 100.0 32 ............................. GCACATAAATGCTCATATCAACCCATCAACCC 1415 29 100.0 32 ............................. CGACAAAGCAACTGGCCCTCTCCGTACGACAA 1354 29 100.0 32 ............................. ACGCCGGCGCTGATTTTGACGGCGGTGTCCAC 1293 29 100.0 32 ............................. TGGTCGCGGATGCGTTTTTCGGCGTCCTTGGT 1232 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 14 29 100.0 32 GTTTGCCCCGCATGCGCGGGGATGATCCG # Left flank : ATACGTAGCGGCTCAGCCAGTCGCGCCTGTGGTCATCGATGGCTGATTCCTCGATGCCGTCCTAGGGGAGTGTGGCTTCAAGTTCTGTCGATGGTTGACAGCATTTGGCGGATACCATGTTCTTGCTCCAACCGGTCCAGCGTGAGGGGGAGGTCCTGGATGCGCTGCAGCAGTTGCGGGTTGGGTGTCATCGATCCCGCACGGGATGCATGTTCGGCCATGTAGTCTGTTCTCCGATTTGCTCATGCCGAATAAGTCGACATAGAGGTGATAAGCCAAGCCATCTTGAAGGAGGGTCTTGGCGTTGGGTTGGATGGAAAATCCCGCAGACTGCAGGTCGATAGTTCACCATGATACAGATGGGTAGCGAAAGTCCCCCCGCATAGTATTTCAATGCTCTAAGTTGTTTGCTGGAGTGATGGCCTTCCCGTTATACTTACTGTGTCCTGCAATTGCGGGAGTGATCCCTATTCTTACCACTACAGATTTTTGGTTTAGGT # Right flank : GCTCCAACAGTTTTCGCAAGTTTTTGAGCTTGAGAGCGTCAGCTAGCCGCGCCGCTTGTCCTAGAGTCATGTTCGATACGGGGCGAACGCCCCGCTCGTACTCACTCAGGCGCTGGCGAGATAACCCCGCCGCGTCCGCGACTTGCTGCTGTGTCAAGCCCTTTGCTTGTCTTAATTCCAGTAGATTCATAGCGTCCCTCCCGGTACACTAATGATTCTACGGGATTGCCCGCACACCTTTTTCGACTGGCGGCGCTGCATGATTGCAGCGAGCTTGTTTGCCCCGCATGCGCGGGGATGATCCGTTCCCACAATTGAGTGACGATATTAAGAATGTGTTTGCCCCGCATGCGCGGGGATGATCCGGGAAACAGAGTGCAATGGTATGTAGAAAAGTTGTTTGCCCCGCATGCGCGGGGATGATCCGCAGGCCGCCACATCGACACAGACCATCGAAGGGTTTGCCCCGCATGCGCGGGGATGATCCCGTGTTGAAAAAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCCCCGCATGCGCGGGGATGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTGCCCCGCATGCGCGGGGATGATCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [45.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //