Array 1 13799-11147 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADVGF010000005.1 Citrobacter braakii strain CB00124 CB00124_c0005, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 13798 29 100.0 32 ............................. CCCGAATTGAAAAAGAATCCCGCGCCCGCGAA 13737 29 100.0 32 ............................. GCCGCCGTTATCCGGGCAACACCTTTCAGAAC 13676 29 100.0 32 ............................. ATACCGCCGCGCTGCTTTCCGGCTCTGGTGGT 13615 29 100.0 32 ............................. TATTTATTCCGAGGATTGGCGAATAACTGGAT 13554 29 100.0 32 ............................. GGCCTTTATTCTGCCAGTGTAGCGCGACGGTA 13493 29 100.0 32 ............................. GATTCTGCCGCGACTACGGGTTTTAGTTTTTT 13432 29 100.0 32 ............................. AAATTGCTTACGCTCTTTGGGCTGGCGATATT 13371 29 100.0 32 ............................. GCCGCTGCAACCGGGAACCTGGTTGTTGCTGT 13310 29 100.0 32 ............................. GGCAGTACGACGAATATGGTCGTTGCGAGGTT 13249 29 100.0 32 ............................. TCATCAAGGCAGAGATGCTCGACATTGGCGTG 13188 29 100.0 32 ............................. TTGGTATTGGTGATAAATCTAAATATACTGAT 13127 29 100.0 32 ............................. AATTACAACATTGATGATTTTAGAATTTATTC 13066 29 100.0 32 ............................. CGGAAACGGGAGCCCCCAATCGAACCCCTGTC 13005 29 100.0 32 ............................. ACGATAGCGGGACCACAAAAACGGCAACGGCA 12944 29 100.0 32 ............................. CGCAACGGAAAATTTTTCCGTGTGACGCTGGG 12883 29 100.0 32 ............................. GATTTCGCGGCGGACGTTATGGCCGCCATGAA 12822 29 100.0 32 ............................. CTGGTGGCATTCGATAACCGGTTATTGATGCT 12761 29 100.0 32 ............................. TACTGTCCCAATCCTGCGCACGTGTTTTTTTA 12700 29 100.0 32 ............................. CACCCCTCAGTAATGTCGATCGGCGTGATAAA 12639 29 100.0 32 ............................. TTGAAATTAAACCATCTCAGGTTAAATTGAAT 12578 29 100.0 32 ............................. GATAGGAGTCAGGAGTGCGTCGGGGATGGTGT 12517 29 100.0 32 ............................. CAGCTTAAAAACGCGGCGCTTCAATTCAGTAT 12456 29 100.0 32 ............................. TTTTAATAATCGTGCGGGGCCGTCAGTCAGTG 12395 29 100.0 32 ............................. TCTTCTGATTATTTGAGCGGCGTTTATATAGA 12334 29 100.0 32 ............................. GCTTACACCGATGCGCTTGATGCACAGAGTAT 12273 29 100.0 32 ............................. GCGACCGCGCCGATTTAGCATAAACTGCATTG 12212 29 100.0 32 ............................. GGCGGAGATTTTCGCCGAACTATTGGCGCTCA 12151 29 93.1 32 ...C........................C GGATCATTGACCGCAGAGGCAGCCGCAAAACA 12090 29 100.0 32 ............................. ATCGGATCGAGATTAAGCAGGTAGGTGACGGA 12029 29 100.0 32 ............................. TTTCGCTTTGCTGCGACCGTCGAGGCTGATAT 11968 29 96.6 32 .........A................... CATCCGTATAGATAAATCGGTGTCTTCGTTGT 11907 29 100.0 32 ............................. GGCTGAACATCTAGGTTGAACACGCCTATCGC 11846 29 100.0 32 ............................. GAACCGAGGCTACCGGACGACTCAGGCGGCTA 11785 29 100.0 32 ............................. CGTCAGAATGGCGGGGGATTACTTGCTTTTGT 11724 29 100.0 32 ............................. TGTGGTGAATTGCTCCACGGTCACGACTTGCG 11663 29 100.0 32 ............................. GGTAAATTCTCCTTTCTCAACGAGTGCCAGCA 11602 29 100.0 32 ............................. TCCCCCTAAAGCACCCCAAAAAAATATAACTA 11541 29 100.0 32 ............................. GCAAAAAGGACAACTCCCGAGAGGGGACTATC 11480 29 100.0 32 ............................. AGTGCGCCCCTCACCGCCACCGGATACATACT 11419 29 100.0 32 ............................. AATAACCACTTTTTGGACGCAATGAGGATTGC 11358 29 100.0 32 ............................. GCCACGCCGTTCGGGTCGATTTTGAGCGAAAT 11297 29 96.6 32 ................G............ GCGCGTACGCTCAGGTGTTCACTGATTGGCGG 11236 29 100.0 32 ............................. CCAGAGGTTCTGATGGTATCCGAAACCATGTC 11175 29 89.7 0 ............T............T..A | ========== ====== ====== ====== ============================= ================================ ================== 44 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : ATTGATTGAGGAAGTACTGGCTGCCGGGGAAATTGAAATCCCTAAACCTTTTGCAGATGCCCAACCTCCGGCGATCCCTGAGCCTGTTTCATTGGGCGATGCAGGGCACAGGGGGTAGCACCATGAGTATGCTTGTTGTTGTCACCGAAAATGTTCCTGCTCGTTTGCGCGGTCGTCTGGCTGTCTGGTTATTAGAAGTTCGCGCAGGTGTCTACGTTGGCGATACCTCACGTAAGGTGCGAGAAATGATCTGGCATCAGGTCACTACCCTGGCAGACGAAGGGAATGTTGTTATGGCTTGGGCGGTGAATAATGAGTCTGGTTTTGATTTTCAAACATGGGGTGAAAACAGGCGCATGGCGGTGGAACTGGATGGATTAAGGTTAGTGTCATTCCATCCTTCGTAAAATCAATGGGTTATATTTCTTTAATAATGTGGAAAATTTGGTGAAATTTTTCTACGGCTATAATCCCTTTTAGATCAGTGATATAGTTTTAGA # Right flank : CTTTGAAAGCAGAAATATTATGGGGCTGGATGGGTTACGAGGATTTTCCCGCCTTTGCCAGTTCTTTCACCAACGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCCGCATCGTCGAAGACCTCTGCATCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGCGCCCGGTCACGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //