Array 1 498633-501925 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJIQ010000001.1 Rufibacter quisquiliarum strain DSM 29854 Ga0373294_01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 498633 30 100.0 36 .............................. TGTCTTCCACCGGATTAAGGCCGTCCGCAAAATGCC 498699 30 100.0 36 .............................. AATGTTAGCTTGGCACCAGGCTGACATCTCGCGCAA 498765 30 100.0 36 .............................. TCTTGTCTATGGCAACGGAGCTGGCGGGATGACCGC 498831 30 100.0 37 .............................. TGGGAAAATTAGAAACGCTCTTAGATAAGGAGCGCGA 498898 30 100.0 38 .............................. CCTACTACCGATATTCTTATTACGAATGATCAGGGAGG 498966 30 100.0 38 .............................. TCTTCTGCTTAGGGTTGCTGTTGCCCCAAACATTGAAC 499034 30 100.0 36 .............................. CTGAGGAGATGATCGCCACCCTCACCTCTGCGTCTA 499100 30 100.0 36 .............................. GCTTGAAGCGGCCAATATCACCTGAAACCATTTTGG 499166 30 100.0 38 .............................. GGGGTTGCGTAAACCGGAATGGTTTCTAGGGTTTTATA 499234 30 100.0 36 .............................. GAATTACCCCTAGACCTTGTATAAACCTCTACCTCC 499300 30 100.0 37 .............................. AAGTAAGTATTACCGGATGCTATAGGGTTAGTGTTGG 499367 30 100.0 37 .............................. GCCACATCGTTGATAGGCTTCACCCGCACCGTGCCCG 499434 30 100.0 36 .............................. TTTGATGAAGCACCTTGGGCAAGCAAAGAGGGCTTT 499500 30 100.0 36 .............................. AAAGCGCCAGGAACAGCTCCCCCCAGCTCAACCGGC 499566 30 100.0 36 .............................. GCATAACTGAAACGGCGGTTAGTGGGAGGCACATTA 499632 30 100.0 36 .............................. GAGGGTTTGAAACAGCAGTACGGCGTTTTGGGCTTT 499698 30 100.0 37 .............................. TCCCAAAGGGCAACACGGCCATATTTGTCCTGGTGCA 499765 30 100.0 37 .............................. ATGTGCTTTAGATCTTCCCTGGGCAGTTTACGCTTAA 499832 30 100.0 37 .............................. AAGACCTTTACGGCACACAAAGAATAACCAAGTACGG 499899 30 100.0 36 .............................. TTGTTAGGCAATTTAACCGCCTTTTCGGTGGTGCTT 499965 30 100.0 37 .............................. AACGCTTAGATATAGCCGTAGATGGACGTGAGTATGA 500032 30 100.0 36 .............................. CTGTATTTTGGATTATATGGAGCGCACCGCCTACTG 500098 30 100.0 36 .............................. CGCCAGAGCGCATTAAATCATTGGTGCAGCTGCAGC 500164 30 100.0 38 .............................. GTATGAGCCTTTTACCTTTGTTCTCCGTGAGGGTAAAA 500232 30 100.0 36 .............................. CGAATTTAAATATATGGACGTAAACGCGCAGTTGAA 500298 30 100.0 36 .............................. AAAGAAAACATGAAAGGAGTATTGTTTTGACTTTCA 500364 30 100.0 38 .............................. TCGTTTAAATAGGTGTTTTTTATAGCGTAATCACACTG 500432 30 100.0 37 .............................. GCATCCAACGAGCTTACATCTTCGCCTACCTGATAGG 500499 30 100.0 37 .............................. AGGATCTCGTGCGGCAGCTTGTCGTTGTCGCCGTACT 500566 30 100.0 36 .............................. TGTTCTACTCCATTTATGAAAATATAGCATTAGAGG 500632 30 100.0 37 .............................. TTTGGCTAAACAACCAATAACCAATAAACCTTTACTC 500699 30 100.0 36 .............................. CGGCCACACTCTACACAGCGACAGACGGGGAGGTGA 500765 30 100.0 38 .............................. ATTAGCACTAATATAACAAGGGTAATTAGTGCGGCCTG 500833 30 100.0 36 .............................. TTCCTTGGTAACGCAATTAACGAGGACGATGCGCTG 500899 30 100.0 37 .............................. CAGAAGAATGGTTGCTGAAGGCGGGGTTTGAGAAGAC 500966 30 100.0 36 .............................. AGTGCGGAGGAGCAAGCGGTAATAGTAGACCGGATG 501032 30 100.0 36 .............................. TATTATTAGTTGTTTAAAGTTCTAAATTTCATAACT 501098 30 100.0 36 .............................. TTGACAATGATAATGGAACCGTTTTCAACCCTAATG 501164 30 100.0 36 .............................. ACCTGGAGCCGATTATAAAAAATGCCAACCTGGTAC 501230 30 100.0 36 .............................. ATGACCAGATTACAGGAACCGTTAACGTAGATCAGA 501296 30 100.0 37 .............................. AACCCGAACGAACTGAAAGCGGGAGCTTCCAACACGG 501363 30 100.0 36 .............................. AAGAAAGGCACGGCCCCGGCGAACACCTGCACGCTG 501429 30 100.0 38 .............................. TCAAATCCAGTTCCTGGAGTTCATTGGAGTTTTTAATG 501497 30 100.0 36 .............................. AACATAATCGCATGATAATGGGGGCGAAGGTTTTTA 501563 30 100.0 36 .............................. CAGAGAAGGTGTCAAAGATGCCGTTCAGTCCGCCGC 501629 30 100.0 37 .............................. CCGATGGCGTCCCCAACGTTGGAGAAGAAGTCGCCTA 501696 30 100.0 36 .............................. TGCCTCAGTCTTTAAATTCCAGTTCCTGGCCGGTGA 501762 30 100.0 37 .............................. TCCAAGTTGTCTAACATTGGTGTTCTTCGCCGCCGTG 501829 30 100.0 37 .............................. AACCCGTTCTGGCCCCTGACCTGTACGAGGAGCTGGA 501896 30 96.7 0 ........T..................... | ========== ====== ====== ====== ============================== ====================================== ================== 50 30 99.9 37 CTTCTAATCGCACCAAAGTGGAATTGAAAT # Left flank : CTTTAAACACCAACAGAATGTATGTAATTTTGGTATATGATATAGGGGAACAACGCGTGGGACGTATGCTGAAGCTGTGCCGCCGCTACCTGAATTGGATTCAGAACTCGGTGTTTGAGGGTGAGATCACAGAGGTGAAGTTGAAAGAACTCAAGCTGAGGGCTACTCAAATTATGAACGACGAGGAAGACAGCCTCATCATTTTCTCCACCCGCGACGAAAAATGGCTGGACAAGCAAGTGCTTGGAAAAGAGTTAAATAGCTTGGATAATTTTATCTGAAGTTGTCAGTGGGGTTTTTCTAGGGAGGTTGTCGTTCCTAGGACCCCGTCTTTTTGACCCATTTCTGCGAAAACAGGCCAAAAACGCGGTTGTCAGTCTCCCAGTAAAATCATAGCATTCCCCACCGACGCTTCCAAGGCACCATTCATTAACATTTTTAGGTCTCCCATACCACCATTACGTTCTAGAAACGCTATTTTTACATGCCATATCAAACGG # Right flank : TGCGGGGGCATGGGCGAGGCCAACCCTACGGGTGACTCTACTAATCGCTGAAATCTGTGGCAGAGCGGGGTGAGGCGGCTGACCTTGGCGGCTTCTAATCAAGTCACAATAAGGATAAAAGCGTTTTGGGGCTGTTTTCAGAAAAACAGCCCCAAAACGCTTTCCTTCAAACAGGCAGTACTACTACAGGTTCAACGTTCCCGCAATTTCCTTTAAGGCAACTTCGCCTATTTTGGCTAAATATTGCGCGTTGCTGTACCGCACGGTAGCGTTTACATAGTTCAGCTGCGCATCCCTAACCTCCATAGTGGTGATGCTGCCCAGGCGGTATTTCTCCATGGTAATGTCCAGGTTTTGGCGGGCAATGCGCTGGTTGTTTTCCTCCAGGCGCACCAGGGTCAGGTTGGTGAGGTAGGTCTGGTAAGCAGAAGCCAGCTGTGCGTTCAGGCTTTGGTTGACCTGTTCCAGTTGCAGTTGCGCACTGTTGATCCCTATGTTGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCTAATCGCACCAAAGTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.90,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : NA //