Array 1 1235273-1234708 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LS483361.1 Streptococcus dysgalactiae subsp. equisimilis strain NCTC6179 chromosome 1, complete sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
   1235272	    36	 100.0	    30	....................................	GGTTGCACGGTAGGGTGAAGCATCGAGTGT 	
   1235206	    36	 100.0	    31	....................................	ACCGTCTATCTTGATGACGACACCGAGAGTG	
   1235139	    36	 100.0	    30	....................................	TTACGGCGATAAAGGCTCAGATGGCAAGCA 	
   1235073	    36	 100.0	    30	....................................	AGCAAATGTGCTGCGGCAGTTAGCGTGCAT 	
   1235007	    36	 100.0	    30	....................................	TCGACAATATGATAGAGTAACTTTCGCAAA 	
   1234941	    36	 100.0	    30	....................................	GTATCCTTTCTCGATAAACACTTCGCTTCA 	
   1234875	    36	 100.0	    30	....................................	TACTTACTCATTTGAGCCAAGGCAACCACA 	
   1234809	    36	 100.0	    30	....................................	TAGGAAGCTCAATGAACTTGGCCGTTTTAG 	
   1234743	    36	  94.4	     0	.................................TT.	|                              	
==========	======	======	======	====================================	===============================	==================
         9	    36	  99.4	    30	GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	                               	       

# Left flank :   GAGAAACCCGAAGTGAAATCGATGATTGACAAATTGGTTGCTACGATTACAGAACTGATTGTCTTTGAATGCTTAGAAAATGAATTAGATTTAGAGTATGATGAAATCACAATCCTGGAATTGATTAAGTCCTTAGGAGTAAAAGTAGAAACGCAAAGTGATACTATTTTTGAAAAATGTCTAGAGATACTTCAAATTTTCAAATATCTCACTAAGAAAAAGTTGCTAATTTTTGTCAATAGCGGAGCTTTTCTAACAAAAGATGAAGTGGCTAGTTTACAAGAGTATATATCATTGACAAATTTAACAGTTCTCTTTTTAGAACCACGTGAACTATATGATTTTCCGCAGTATATTTTAGATGAAGAATATTTCTTAATAACTAAAAATATGGTATAATATTCTTAATAAATGCAGTAATACAGGGGCTCTTCAAGACTGAAGTCTAGCTGAGACAAATAGTGCGATTACGAAATTTTTTAGACAAAATAGTCTACGAG
# Right flank :  AATATCGTCCATGGTAACTTGAGAGAGGAATAAAGACAACATCCTTAAGCCTTTCTATTCTTTCTATTAAAACGTTTTCATGTTATAATAGTCAAAAGGAGAAGGAGGGTAGAGCGATGGAACAAACATTTTTTATGATTAAGCCCGATGGGGTTAAGCGAGGGTTAGTTGGAGAGGTTTTGCGGCGGATTGAGCGTCGAGGATTTACGTTTGATCGATTAGAGCTAAGACAAGCTAGTCCGGAACTCTTGGCTAAGCACTACGAAGCCTTGGTAACTAAACCATTTTATCCTGAGCTTGAAGCTTACATGACAAGTGGTCCTGTTTTAATTGGGGTGCTGTCGGGAAATCGGGTGATTTCCTCTTGGAGAACCATGATGGGGGTAACTAATCCTAAGGATGCTCTTCCCGGAACCATTCGGGGTGATTTTGCCCAAGCTCCTGGTGATGATGGAGGTATTTTTAACGTGGTGCATGGGTCTGATTCAAGAGACTCTGCT

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:61.11%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-0.20,-2.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [2-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : II-A/B/C [Matched known repeat from this family],   
//