Array 1 32819-35431 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIKQ010000004.1 Shewanella sp. WXL01 Scaffold4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 32819 28 100.0 32 ............................ ATTTGGCATTCACTATGCCGCTTTTCCACCTT 32879 28 100.0 32 ............................ AATCCCGCGTTTTACTGACTATCGTGGTCGAT 32939 28 100.0 33 ............................ CATACAAAAAATGGAGCTGCTCAGCTGGGTGTA 33000 28 100.0 32 ............................ AGACTCGTCACTGCGGAACGTTATGCGCAAGC 33060 28 100.0 32 ............................ CGTAACGAGAGCAAAGCGGCCAGCATCATTAT 33120 28 100.0 32 ............................ CAACGAACCCATGTCATCCATCGACACGTTGT 33180 28 100.0 32 ............................ AAATCGGCAGGGTTGGAAATGACTTCGCACAA 33240 28 100.0 32 ............................ AGATGAAAATGAAGCCAACACCGCTTTTTGGT 33300 28 100.0 32 ............................ CAAAACATGGTCTGCCCATACGGGCGTCTAAG 33360 28 100.0 32 ............................ AGCATGGCTTTGGCCTTGGTGTTCAATGTTGG 33420 28 100.0 32 ............................ GACCATATCTCGGCTATGTACTACGACCCAAT 33480 28 100.0 32 ............................ AGCACCGCTTTTTGGTCGGCGGTGTAGCACAT 33540 28 100.0 32 ............................ TATAAACTGGCAACAAAAAAGCCTGTAACCAA 33600 28 100.0 32 ............................ CGATGGCTGCGGCGAAGTGAACAACGTTTTCA 33660 28 100.0 32 ............................ TTGACCTTGAAAATTCGTGCTTTGGTGACGAA 33720 28 100.0 32 ............................ AACAACCGCCAAGTGTCGCCCATTCTGAATAG 33780 28 100.0 32 ............................ TATAGTTACGATTCAACTGGCGATGGTGAAAT 33840 28 100.0 32 ............................ ATGACAGCTGAGTATCAAGAAGATGTTGACGG 33900 28 100.0 32 ............................ ACTAACTGAGTTTTTCTCGTACTCAATATGAG 33960 28 100.0 32 ............................ ATTATCCTGTCTTTACCTATAGACTTTCTGAC 34020 28 100.0 32 ............................ ATGCGCCTTAGCAGTCTACGACTATCTTTTTA 34080 28 100.0 32 ............................ TTGCTAGTTGGGCGACCGTGGCGGGTTTTAGA 34140 28 100.0 32 ............................ TTGTCTTTCAAGTCATTAAGCTGGTGCAATAC 34200 28 100.0 32 ............................ TTTACGGTGGTGTGCTTCATCATTGCTTGCTA 34260 28 100.0 32 ............................ TAGTATGTTGTCGCAGGCTTCTAGGTAGTGCT 34320 28 100.0 32 ............................ CCAGTAAAGGATATTTAGATACGATAACTAAT 34380 28 100.0 32 ............................ CAGTGAGTCTAAAACATCCATCTGAGATCGAA 34440 28 96.4 32 ........................A... AGCATCAAGCGCTTGCAGTTGCGCTAAGGTAA 34500 28 100.0 32 ............................ ATACCACGGAGTACCAATTCAATTCTAAGTTT 34560 28 100.0 32 ............................ AAGCAGGTTACGGCGCCGAAGGTGCTGATATT 34620 28 100.0 32 ............................ GCTGTATAATAACGTGACCTTGTAGCCTGCTT 34680 28 96.4 33 ..................T......... CACCATGATTAGACATGAAAAGTACCTCCAACA 34741 28 100.0 32 ............................ GTCAACAAGCAATTCTAAAAGCGTCACTGTAT 34801 28 100.0 32 ............................ TTGCAAAACGCTATTATTAACGCTTTTTTCGC 34861 28 100.0 32 ............................ TCTGTTCGATTTTGCCTCGATAGAGAGCTAGT 34921 28 100.0 32 ............................ GAGCAATGGCTTTGTGGCGCATTTAATTCGTT 34981 28 100.0 32 ............................ TTTTGGAATGTTGTCGATTTCATTAATACCGG 35041 28 89.3 32 ...........T.T....G......... TGTAGCTTTTCGCCCTGCTAGACATCTTTTAG 35101 28 92.9 32 ......T...........T......... TAATCTGCCACATACGCGGCTTGCAACATAAA 35161 28 82.1 32 ..C..........T..ATG......... AACAGGGATTTATGTGCAAGTACAACAAACTT 35221 28 89.3 35 ..........C.T.....T......... GTCTGGCGTTTCTACTTCTTTGCTTTTGCTTTTTT 35284 28 92.9 32 T.....T..................... TCTTTATGTTTAAGCATCGATAGATGCGAATA 35344 28 89.3 32 .................TG.....T... GCGCTTTTTGAAGCTGTAGTTTTTCGTCCTGC 35404 28 85.7 0 ..C.........T.....G......C.. | ========== ====== ====== ====== ============================ =================================== ================== 44 28 98.1 32 GTTAGCCGCCACCCAGGCCGCTTAGAAA # Left flank : AAGCGGTTCCTGATGAAACACAGTATGTCAGTTTTGTTCGTAAATCGGTGAAAAGTGCCGCGCGTATTGAGAAAGACATGCAAGATAAAGTGAGACTTAGGGCTAAGCATACGGGGGAATCAATCGAGCAATGTATTGCAGTGCTTGAAAAAACAAAGCCCGATGTTAAACGAGAACTGCCATTTATATTTTTGCATAGTCAGGAAACTAAACAGCGTTCACCAAATGCGAAAAGTAAATTCCCACTTTTTATTGAGTTGAAGTCGACTAAACAGCAGCAATCAGGTGTTTTTGACTGTTACGGGCTAAGTGCAAAAAATGTGAATGGCGGACAAAACGCAACGGTTCCACATTTTTAACCCTTTTTGACCTTATTTTTTGCTCTTTAATAATTTGCAAATAAAAACAATAGGTTATATTGGTGTGCTTTTTATATGGTGAAAACTTGGTTTTTTGCCTAAAACCGCCGATATAGCCTATTTTCGTGTTAGAATTTTATT # Right flank : ACCAAGTGTGCGCGTAAAGTAATTATTTTACGCGTACACTTGAGCCAGTTTAACTAACTCAGCGCGCAATAAAGTGTACGTATCGGCCTAGTGACAGGTAAGGCTCGCGTTGCGAGTATTTCAGCTCCATTTCAATTAGCTGATTTTTGTCAAAGTTCACCGGCAGGCTTTGTTTGAGGTAGTCGTTAATCACTCGCACCCCTGATTGACATACTAGCTCCATTTGCCAGTCGTTAAACCATTGGCGTACGTCGTTTATGTATAGCGGGTAGTTGGGTGTCAGGCCGATCTTCTTTTTCACCTTTAGCCCTTTGGCGACATAGTCGAGGTTACCTGAAACTAGACTGTGAAATCTTAGTGCTTCTTTGTTGTAGAACATCAGCGAGAACAAACCATTGGGTTTGATGAACTGCCTTAAACCATCAAGTGTCGCCTGGGCATCTTGCAGCCACTCGGCTACTGCGTGGCACATGACTAAGTCAAATTGCCCAAGCTCAGCG # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAGCCGCCACCCAGGCCGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.60,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-23] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //