Array 1 1013915-1011900 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014835.1 Streptococcus halotolerans strain HTS9 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 1013914 32 100.0 34 ................................ AACATCATCATTAGACTGATATTCAGGTGCTCCA 1013848 32 100.0 35 ................................ GATCTTATTAACTTTCAATTTTCCTAAAAACCAGC 1013781 32 100.0 36 ................................ TTCTGGTGGAAAGCTATCAAGTAACCAAAGCAACCG 1013713 32 100.0 32 ................................ ATCCTACGGCAGTAGTACCGCCATATAAACCT 1013649 32 100.0 35 ................................ ATTTTTTAGCATTTTTACAAAGTACTCAACATTAC 1013582 32 100.0 34 ................................ AAGGCAATCCCCACTTACAAGCGTATGTGCGTCT 1013516 32 100.0 35 ................................ AACTAGGGAGGATGAAGACAGAAAGGAAAATAAAG 1013449 32 100.0 33 ................................ CTTTATGGTATGCAACATAAAAGCTTTATTAAC 1013384 32 100.0 33 ................................ TTTGAGTAGTTTCGCCCAGAGCTTATCGTTGTT 1013319 32 100.0 35 ................................ TTTGTCGGTATCTACCTCAATATCACGCCTAATCC 1013252 32 100.0 34 ................................ AAGGTTTGCTTTTTGATTATGTTATCTTTTATCA 1013186 32 100.0 34 ................................ TCGTAGTAATCATGACCTGCTGGGATAACATATC 1013120 32 100.0 35 ................................ TTTAACATGTTTTAGTCGAACTCCAATTTCCCAAA 1013053 32 100.0 33 ................................ ATAGTTACGTGTCTGAATGCTGCCTGTAACACC 1012988 32 100.0 34 ................................ GCTTGTTTAAGATCGTTGACGGTAAATTGTCCTG 1012922 32 100.0 35 ................................ ATTTAAGACAAGTGATTTATTTAAGACCTCTACTC 1012855 32 100.0 35 ................................ CATTGTTAATGCAGTTATTTTCATTTTTTGTCCTG 1012788 32 100.0 34 ................................ CCACGCTGTCATATAAATGTTAACCGGACGTTTG 1012722 32 100.0 33 ................................ TTTTAGATATTGCATGACTAGATTTAGCATGAT 1012657 32 100.0 34 ................................ TTTGATTCTTCTGATGTGATACCTGTTCCAAAGG 1012591 32 100.0 34 ................................ TGCTCTCTGAGCGTTTTATTTTCTTTCGTGGTAG 1012525 32 100.0 36 ................................ TAGGCGGTCGGTTAAGGTATAGGTTAGTGTTTCCAT 1012457 32 100.0 35 ................................ TACTTTGAAGAGCCATCTAGTAAATCATTCCCTAA 1012390 32 100.0 33 ................................ CTCTGTTTGATAAACGGTCATGAGTTGCGTTTT 1012325 32 100.0 33 ................................ TAAAGAAAGGAAATAACATGGAAATTAACTGGA 1012260 32 100.0 33 ................................ TCTAATCGACCTGTATGATAATGCGCAATCTGA 1012195 32 100.0 34 ................................ ATTTTACCTCCTTTATTAAATTGCCCATGAGATT 1012129 32 100.0 34 ................................ TTCGATTGCAAAACATAACTGCTCTTGGACTCCT 1012063 32 100.0 35 ................................ GTATTCAAATGATGGCTATACTTCTGCGAGTTATG 1011996 32 100.0 33 ................................ AAAAAAGTTTATACAGAGCCAGATGGTTTAAAG 1011931 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 31 32 100.0 34 GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT # Left flank : CGAAAGCTATTCGAGGCGACCTAGAGAGTTATCCGCCATTTTTGGTCTAGGAGGTGTTTATGATGGTTTTAGTTACCTATGATGTTAATACTAATACAGCTGCAGGGCGTAGACGACTGCGTCATGTAGCAAAGTTGTGCGTAGATTATGGGCAGCGCGTCCAAAATTCCGTATTTGAATGCTCAGTTACACCAGCTGAATTTGTCGACATTAAGGAAACATTACTGGACATTATAGATATGGAAACTGACAGTATTCGCTTCTATTTGCTGGGGAAAAATTGGCAAAATCGAATAGAGACAATAGGTCGCGATAATAGTTATGACCCTGATGTAGGCGTCTTACTCTTATAAAAAATAGTTGTGCGAACCTGAGTTACTCAGTAAAAACTCATAAGTTCGTTGCTAAAACGGCTTGAAATGAGCGATTTTTAATAAAAATGCCTTGAAAAAGGACTTTTGAATTTGATAAAATAATACAAAACAGTGTCTTCTTGCGCT # Right flank : CAATAACGGCTTATGTTCCCAAAATAGCGAGTTTGGTCTAACGCTTTATTGTGGTAGGCCACGGGTGCGGTGATGAAATATTGTGAATATAGTTGTCTGTTAGGCAGTTCACTGCTTTAGTCGCTGTTTGGATTAGTTTTGCTGATTTTATAGTGTACTAAATGCAGATTCATATTGTTATTATTTTTGATATAATAGACGAATGATATTTAGAACATTTTACCAGTCTCCTTTGGGGCAAATCAGTCTTTTAGCTGATGAGGAGTCGCTTTTGGGGCTTTATTTTGTGGGACAGGCTTATTATGAGCGTGGTTTTGAGTCATTTCAACTATTGAATCAGGAAGTCACTCCTCACCAAGAAGCTAAGCTTTGGCTAGATGCTTATTTTGCGGGGCGTCAGCCAGACCCTAGCCAATTGAGACTGGCTCCGCATGGGACTGCTTTCCAGCATCGAGTCTGGTCAGCGCTAGCGGCTATTCCCTACGGTCAAACGACCACTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.60,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //