Array 1 134241-134544 **** Predicted by CRISPRDetect 2.4 *** >NZ_JNJM01000007.1 Oribacterium sp. FC2011 T357DRAFT_scaffold00007.7_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 134241 33 100.0 34 ................................. CATGTATTTGACCGCTGACGGCTTCGAATTATAT 134308 33 100.0 34 ................................. TTTGATGTGTTTCAGGATCCAGTCAAGGTTGACG 134375 33 100.0 35 ................................. TCTGTGAAATCATTCCAGGATGAATAAGAGAAATG 134443 33 100.0 35 ................................. CAGAACACTCTTACAGTGCTTAAAACGGCTCAGAG 134511 33 90.9 0 ............T......A..A.......... | T [134542] ========== ====== ====== ====== ================================= =================================== ================== 5 33 98.2 35 GTCTCCCCTCACCCGAGGGGAGTGGATTGAAAT # Left flank : CCTTGATGGCTATCCTCCGTTTTTGTGGAGGTGATTTATGCTGGTGCTGATAACATATGATGTTAACGTTTCTGAAGCCAAAGGAGCAGCGAGACTTCGTAAAGTAGCAAAGACATGTGAGAATTACGGTATTCGTGTTCAGAATTCTGTTTTTGAATGTAATGTTGATGCAAGTCAATGTGCGCTTCTAAAGGCCAAGTTACTGGAAATAATGGACGAGAAACTGGATAGTTTAAGGTTTTATTTTCTTGGAAATAACTACAAGGATAAAATTGAACATTACGGTGCAAATTCAAAATATGATATGAAGGATGTTATTATTTTGTAGTGCGAAGGTAAAGCAATCATGAAATGCTAAGAAGGTTCGCACAGTGATAAATGTACATATTGCATATAAGCAACTTTGCTTTTATGTTAGATATGTTGTAAGGATTGTTTTAAATTTAAATTATATTAACAAATATTGTGCGATGCTAATCAATATTTCGGCAATATTTGCC # Right flank : TTCACCACATGGTTAATAAACGGATTATGTTTTTAAATAATAATAAGGATACAGACAGAGTAATTATCATATTTGGAATCGTTTTGCTGCTGATGGAAATCTGGAAGCAGCTTATGATATGGAAGGTGGAGTTTGGAGGAAGGTACGAGATATGGTATTTTCCGTTTCAGCTTTGCTCTATGCCTATGTACCTTTGCCTTATGTATGCGGCTTTGGCAGGACTTAAAAGCACGGAAAGAATCAAAGCAGTAATACTTACTTTCATACGCGATTACGGATTTCTTGGTGGTATCATGGCACTCATCGTGCATGACGGACTCATTCACCCGGGTTACGCGGCATTGACAGCCCATGGATTTATATGGCATGTACTTATGCTGGTGCTGTCTCTGTATATCACGTTTAATGGTTTAGCACTTCCGGGAATCTCCGGATTTGTAAGTACACTTCCACTTTTTCTGATTCTTTCGAGCATGGCAGAGATAATAAATGTCATCTTC # Questionable array : NO Score: 8.97 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCCCTCACCCGAGGGGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTCCCCTCGCGAGAGGGGAGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 58363-59370 **** Predicted by CRISPRDetect 2.4 *** >NZ_KL370810.1 Oribacterium sp. FC2011 T357DRAFT_scaffold00019.19, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 58363 37 100.0 38 ..................................... ACCGAGAACAGACGGAAACGCCTGCATTTGTATTGGTG 58438 37 100.0 38 ..................................... TTCATAGCAGAAGAACAGCCCGTAGGAGCGAAAAAGCG 58513 37 100.0 40 ..................................... CTCTCCTTTGCGTCCTGCAAAAGCATTGAATGCTAATGCG 58590 37 100.0 37 ..................................... TCTTTGCGAAGCCGTAAAGCCCTTCCGTGATATCTGC 58664 37 100.0 40 ..................................... CTCTCCTTTGCGTCCTGCAAAAGCATTGAATGCTAATGCG 58741 37 100.0 37 ..................................... TCTTTGCGAAGCCGTAAAGCCCTTCCGTGATATCTGC 58815 37 100.0 36 ..................................... TGCCGCCAAAGACCTTTATGGGTCTTTCTATCCTGT 58888 37 100.0 38 ..................................... TCTTCCTCGTCATAACACTCCCATCCTATTAAATCTAC 58963 37 100.0 37 ..................................... TTTGTGAAACATTATTATGGCTGTGTAGTTATGCACT 59037 37 100.0 37 ..................................... TTGTGAGACAGGAGACGCAGACGTTTCCATGTGCGAG 59111 37 100.0 38 ..................................... ACACGTTGATTTCAGGGTAGTTATCAACGCCTGTGTTA 59186 37 100.0 38 ..................................... ACGAGAGTAACTGCATCGTCTGTCTCAATCCTAGTCCC 59261 37 89.2 36 ...................A...C....A...G.... AAGATAGCGGAAACAACCTTAGCCTTCTTAGCTTTG 59334 37 75.7 0 ..........T...T......TTC....T....GT.A | ========== ====== ====== ====== ===================================== ======================================== ================== 14 37 97.5 38 GTAGAAAAGGCTGACGCCCGACCTAGGGCATTAACAC # Left flank : AGGTTATGATTGGTTGATAGAAATATAAAAAGTAATTGCCTAAATAGGGATTCTTATTTAAAATTAAATCAACATACGTACTGATAACAAAGGATAGGTTTTGGTTCCGAGTAAAGCTTCCGGCATAATAGCCATTATGGAGGTGGATCAGAATGTATCTGATGTTATCAGGTGAAGATTGAAAGGTTCATCTTATGGGAGGTGAGTCTTCATAGCGGATGGGTGTACTGACTTAGTTCAGGGTATCTGCAGAAACGATTGAAGATTTAGTGAAGATAAGATGGACTGATCGGTTTTTCAGGGATGCGTACATAAGTGGTTAGGTGCTTTGGATGGGTTATTCGAAGTTTTGTTAATCATGTAAAAACTTGAAAAAATCCGGTGTTTTCAGCCTGACACCAAAAACAAGCACAAAATCGACCACATTGTAGAATATTTAACGTAGATGTCTTAAATCAGCCTTGCGGAGCCGCTCATAGAGCCAGTCCATTATACCAAGC # Right flank : AATCATTATCATTTGAAAACCTGCATTATCTTTAAACGGATAATGCAGGTTTTTTGTGTCTTCTTTATTACTGCGGAAATCAAATAATTCATAATAGTTGAAATTTTTTTGATTCATCACTAAATAATCAAAATCTGAAGAGCATATATAAGTGTAAGAAGTAAACGAACAAAAAAAGGAGACAAAGAAATGAATAGAGAAATACCTATGATTGAAGTTGAAAGTTCATATGGAACAAGAGCAGTATCACTAAATACACATCATCTGATGAATGGCATCATTTTTCTGAACGGAACCATAGACAGGGAAACAGCTAATGATTTTATTTCCCGGCTCATATATCTGGGAGAGAATTTCAAAGGGCCTGTAAATATTTATATCAACAGTCCGGGAGGAGAAGTAAATGCGGGACTTGCAATCTATGATGCAATACAGGGGAGTGACCTTGAGATCAATATGATCTGCACCGGAATTGCAGCCAGCATGGCAGCGGTATTACT # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGAAAAGGCTGACGCCCGACCTAGGGCATTAACAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [12,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA // Array 2 62026-62287 **** Predicted by CRISPRDetect 2.4 *** >NZ_KL370810.1 Oribacterium sp. FC2011 T357DRAFT_scaffold00019.19, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 62026 37 97.3 39 .....................C............... TTTGAGACATCCTTGTCCTGACGCAGATTCTCCAATGCC 62102 37 100.0 37 ..................................... GCAGCTTGTGCGAATTCAAATTCTTCTGTTTCGTAGT 62176 37 100.0 37 ..................................... CCTCTGCCCGGACATCAGAGGTAGCTTTCAGAGATGA 62250 37 91.9 0 .......................C..........A.A | G [62283] ========== ====== ====== ====== ===================================== ======================================= ================== 4 37 97.3 38 GTAGAAAAGGCTGACGCCCGATCTAGGGCATTAACAC # Left flank : GCTGTTGGGCAGATTCCCAATGGTGTAAAGGTTACTTTTGAAGGGAATTACAATAACACTTATGCATTGGTTACGTATCAGGGGGTAACAGGTTTTATTCCTATGGGATATCTGGATTTTTATGAGGCTCAGATGTGAGCTAAAATCAAATAATTATTCCGGCATGATGGGATTAAGTTAAATCATGCCGGAATATCCACAAATACTATATAAAAATAAGATTATAGGTATTGCTGTAGAATAGATACTAATATAAAATTGAAACAACAAACGTACTGGTAACGAAATATCAGTTTTTAAGGGATACGTACATAAGTGGTTAGGTGCTTTGGATGGGTTGTTCGAAGTTTTGTTAATCATGTAAAAACTTGTAAAAATCCGGTGTTTTCAGCCTGACACCAAAAACAAGCACAAAAATGACCACATTGTAGAATATTTAACGTAGATATCTTAAATCAGCCTTCCGGAGCCGCTCGTAGAGCCAGTCTCTGATACCAAGT # Right flank : ATAATTATTATTTGAAGACCTGCATTATCTTAAAAACGGATAATGCAGGTTTTTTGTGTCTTCTTTTTTCTCAGGAAGATGATATTTGAAATCATTCTGATTTATCGCTAAATAATCCCAAATTCAAAGTACATATATATGTAGTAAGAAGTGATGAAGCCAAAAAGAAAAATCCAAATCTTCGCTAAATATGCAAGATACGGAGCGCATATATAAGTGTGTGAAGCAAAGAGGTCAAAAAAATTTCGCTTCATCGCTAAATAACCAAGATCTGAAATGCATATATAAGTGTAAGAAGTAAAGTAACAAAGAAACCAAATGATTCATCAGGATTCAATGAAACATCTGATGAGTTAGATAACACAAGTAAAGAAATGGAGAAATAAAGATGGAAAATTTAAATGAAATGCTGCCACTTGTTATGCAGGGTGCCATCATAATAACGGCAATAGTAAGACTTACAATCATAATAGTTAGGAAATTCATAGGAGTATTCAATA # Questionable array : NO Score: 2.72 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGAAAAGGCTGACGCCCGATCTAGGGCATTAACAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [12,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA //