Array 1 15974-17048 **** Predicted by CRISPRDetect 2.4 *** >NZ_VZAL01000083.1 Prevotella copri strain iT2117 NODE_51_length_20654_cov_10.401_ID_113, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 15974 30 100.0 36 .............................. TACAACATACAAACTGAATGGGCGAACAGCAACACA 16040 30 100.0 35 .............................. TACAACACCTGACCAGTCAGCATGATGCCAATTTC 16105 30 100.0 36 .............................. TACAACAGTTTGCTGCATGCCGAGTGAATCAAATTC 16171 30 100.0 35 .............................. TACAACTCATCTGCTACCGATAAGCGACGTGTTGG 16236 30 100.0 35 .............................. TACAACCCTTACAAGAAAAAGTAATCATTTTACAA 16301 30 100.0 35 .............................. TACAACGGAAGTGCAACGGCCGCTATTATTTCGTA 16366 30 100.0 35 .............................. TACAACGTTTTGCAACGCTTACAGGTGTTAGCGGT 16431 30 100.0 36 .............................. TACAACACCCCTCACAATATATAAATAAGGTAACGA 16497 30 100.0 36 .............................. TACAACAGGACGGCAGTTAAACAACTCAGGCGCAAG 16563 30 100.0 35 .............................. TACAACACCCATTTTTCACTGTGCGCTACACGGAA 16628 30 100.0 36 .............................. TACAACTTTTTCCTGCCTCGTTAGTCCATCCTCAAC 16694 30 100.0 35 .............................. TACAACCGACAACGAAAAGTTTAGATTAAGAAGAA 16759 30 100.0 35 .............................. TACAACGTCATATTTGCAAAGTTAAGATAATACAG 16824 30 100.0 35 .............................. TACAACAGTACATGAAATAGGCAACAACATGCCAG 16889 30 100.0 35 .............................. TACAACACTTATTCAAAGACCACTCATTTTGTTGG 16954 30 100.0 35 .............................. TACAACGCAAAGTTCCAAAAGTAACACCATCTTCT 17019 30 96.7 0 ..........................T... | ========== ====== ====== ====== ============================== ==================================== ================== 17 30 99.8 35 GTTGTGGTTTGATGTAGGAATCAAAAGATA # Left flank : ATATTATTCTGGAGAAATAAAAAAACTTTCCTTACCTATTATGACATGACTGAAGATAGACTAAATGCTTATCATATAATGTGGTTATTTGTGTTTTTCGATTTACCTGTTACTACGAAAAAAGAGATGAAGGCTGCTTCTCTTTTTCGTAAAAACTTGGAGAAAGATGGTTTCTCTATGATGCAATTTTCTGTCTATATCCGTCATTGTGCATCAAGGGAAAGTTTGGAAGTGCATGTAAAACGGGTAAAATCTTTGCTTCCGGAGGCTGGAAAAGTAAGTTTGTTAAGTGTAACAGATAAGCAATATGGAGATATCTATAACTTCTGGGGTAAGCCCAAAAGTATTAATAAGAGTAAAATATCGAAAAAAGTTATCAGCGAACCTATTCAATTGGAGTTTTTTTAGTACTTTTGCATTAGAAATTATATCCTACTCACCATTTCTTATTAGATAGAGTGTTTGTTATGCGCTGAAAATCAGTATGTTCAAATCTGTAG # Right flank : ATATTATATACACGAGAATGGCATAGGGGCTGGCGCAGTTTCTGAATATCTTGGAATATAGGCAAGAAAGAGTCTTGTTCTCCACGGACTTCAATCTTTTCAAAAGAAGAACGGAAAAGATAAAAGTATCTCTGTCAGTATATGATAGTGCGGTAAAATGTATTGAGGAAGTGGAATGTGGCAAAAGAACTCAGCAAAACTATTCTTCTGAACTAAGAAACACCATTTGCCCAATAGATAAGAAAAACAATGCTGATGTGACGATAAGGGCCAACACGCCGTAGATTGATTGGGGATTGTTGACACAGTATCCTATGCAGGCAACCCAAACAGCGAAGGACAAAAGGCTGTTGTCACCCAACGCTCATATTTCTTAGAGTGCTTCGGGGGAGTATCTTCGCCTACTACTTCAATGCTAACGATTTCTACCTTTATTTCATGTTCGGGCTTGTTCGATTCTTCGTTGTTGTTTGCTGCGTCTGATATGCTGTTGTTGTTCT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATGTAGGAATCAAAAGATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTGTGGTTTGATGTAGGAATCAAAAGATA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.80,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //