Array 1 201013-200306 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI911450.1 Salinispora vitiensis strain CNT-148 B159DRAFT_scaffold00006.6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 201012 37 100.0 36 ..................................... GACAATGGAGCGGGCTTGGGCCAGGGTTTCCGCGAA 200939 37 100.0 41 ..................................... CCGGGGGACGAGAATCAGCGCGAAGGCGTCAAGAAACTGGG 200861 37 100.0 39 ..................................... CCTTCGAGGGGACGGAGGACACATGAGCAGGCGGGACTG 200785 37 100.0 35 ..................................... CTTGCGTCGGTGTGCATCCGGCCAAAGATCCAGTA 200713 37 100.0 39 ..................................... CACCCGGAGATCCCGGGTACCAGTGACGGGCTGATACCG 200637 37 100.0 36 ..................................... AGGCAGTCGATCGTGCGCCGGAGCGTGCCCTCCACG 200564 37 100.0 38 ..................................... ACCTGCTCCAATGACGTGTGCAATCGGCCGCGACGGGC 200489 37 100.0 38 ..................................... AGTACAAAGCGGGCGGTGATTGCGCAGGCCAAGGCCCT 200414 37 97.3 35 ....T................................ CTATGTCTCCCGGGGGCATGCCCCATCGCCGTTGA 200342 37 94.6 0 ..........................C.........A | ========== ====== ====== ====== ===================================== ========================================= ================== 10 37 99.2 38 GCTGCGCCCGGCCTCCGCGCTGGGCGAGGATCGCAAC # Left flank : AGGATCGCAACGTCTTAGGCGGCCGGTGTGACAACCGGCGTTACGCAACAGCTGCGCCCGGCCTCCGCGCTGGGCGAGGATCGCAACGGGTAGGGCCCTGGGGCGAGTAGCCGGGCGAGGACGTGCTGCGCCCGGCCTCCGCGCTGGGCGAGGATCGCAACACATCGCCTGGGTGATGGAGAGAGACGGTACGGCGCGGCGCTGCGCCCGGCCTCCGCGCTGGGCGAGGATCGCAACGCGGACAAGCGCGGCGGCGCGGGCCTTGAGCGTGCCAGCTGCGCCCGGCCTCCGCGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : CGGCTCGAGTGGGACGGAGATAGGGTGCTCCCTGCAGCTGCGCCCTCGGCGCCAGCGACTGACCACCCCCGACCAGTCCGCCGGAGCTTCGGCGCCGCCTTACCGTGAGGCCGTAGTTCCGGGGGAGGGGTCGGCTTGAGGGTGGGCCGGAGAGAATCCACTCGTTACCTTCTGTGCGTGGACGTTGACGACCTGTTCGCCGGCAGTGGCGGTCTCGCTTCCCTCCTTTCGCCGACCGACTGGGCCGCGATGTGCTCGCTCGGCTCCCGGTGCCGCATGGCTGCCGACTACCCGTTATTCCGACAGGGCGACGAGGGGGAGCACGTTTACGTGATCCTCAGCGGTGCGGTCAAGGTAGTTCGGGGCGAAGCAGCGGGCAAGAGCGCGATCCTGACGATTCGTGGGGCTGGCGACGTCGTCGGCGATCTGGCGGTGATGGATGGTGGCCGCCGCTCCGGCACGGTGTCGACGCTGACCCCCATGGTGGTCCGGGTGGTACC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGCGCCCGGCCTCCGCGCTGGGCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCTGCGCCCGGCCTCCGCGCCGGGCGAGGATCGCAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.00,-14.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [28.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 201833-201276 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI911450.1 Salinispora vitiensis strain CNT-148 B159DRAFT_scaffold00006.6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 201832 37 100.0 36 ..................................... AAGTGGCTGGTCGCCGCGGACCTGGCGGTGCCGGCC 201759 37 100.0 37 ..................................... CGGAGGTCAGAGTCGATGTAGCCCAGCAGGGTCAGCA 201685 37 100.0 37 ..................................... CGTGTCGCCTGGCATCGGATTACTAGACGACTCCGCC 201611 37 100.0 36 ..................................... CCGGCGCGTTGCGGGGGTGCCCAGTTGCCCTGCCCG 201538 37 100.0 39 ..................................... GTCTTAGGCGGCCGGTGTGACAACCGGCGTTACGCAACA 201462 37 100.0 37 ..................................... GGGTAGGGCCCTGGGGCGAGTAGCCGGGCGAGGACGT 201388 37 100.0 39 ..................................... ACATCGCCTGGGTGATGGAGAGAGACGGTACGGCGCGGC 201312 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 8 37 100.0 37 GCTGCGCCCGGCCTCCGCGCTGGGCGAGGATCGCAAC # Left flank : AACTGCAGGTCGCCGGAGTGCTGCTCGGCGCCGGCCTGGCGCTGCGCCCGGCCTCCGCGCTGGGCGAGGATCGCAACAGCGCCATCTCCCAGATGACGCCCCCCTCGCCCTTGCTGCGCCCGGCCTCCGCGCTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : GCGGACAAGCGCGGCGGCGCGGGCCTTGAGCGTGCCAGCTGCGCCCGGCCTCCGCGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTGCGCCCGGCCTCCGCGCTGGGCGAGGATCGCAACGACAATGGAGCGGGCTTGGGCCAGGGTTTCCGCGAAGCTGCGCCCGGCCTCCGCGCTGGGCGAGGATCGCAACCCGGGGGACGAGAATCAGCGCGAAGGCGTCAAGAAACTGGGGCTGCGCCCGGCCTCCGCGCTGGGCGAGGATCGCAACCCTTCGAGGGGACGGAGGACACATGAGCAGGCGGGACTGGCTGCGCCCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGCGCCCGGCCTCCGCGCTGGGCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCTGCGCCCGGCCTCCGCGCCGGGCGAGGATCGCAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.00,-14.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [18.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 202811-202256 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI911450.1 Salinispora vitiensis strain CNT-148 B159DRAFT_scaffold00006.6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 202810 37 100.0 36 ..................................... CTCGACCACTCCACGGCGGAGTGGCGGACCGCGCGC 202737 37 100.0 37 ..................................... CACACCGACGCCGGCACCACCGCAACCCGCGTCGTGC 202663 37 100.0 35 ..................................... TTGCGCAGCCAGTGACTGGGGGCGTCTGGGTTGGT 202591 37 100.0 35 ..................................... GACGAGGTCCGCGAAACCCGGCGCCTGCTCGCCGG 202519 37 100.0 39 ..................................... AACACCGCGCGCCGGGAGGACATGCCCGAAGAGGTTCGG 202443 37 100.0 40 ..................................... CGGATCGGGGCCCTGATCGGGTCACCCCGCGCCGACCCCA 202366 37 100.0 37 ..................................... TGCAGGTCGCCGGAGTGCTGCTCGGCGCCGGCCTGGC 202292 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 8 37 100.0 37 GCTGCGCCCGGCCTCCGCGCTGGGCGAGGATCGCAAC # Left flank : TGCTGCCACTCGTGCAGGCCCGACTGCTCGCACGCCACCTTCGTGGAGACCTGCCCTCGTACCAGCCATGGACGGTGAACTGACCCATGGACCTTCTCGTCACCTACGACGTCGAAACAGCCACCCCGAAGGGCAACGCCGACTACGCAAGGTCGCCAAAATCTGCGAAGCATACGGTCATCGCGTACAGAAATCTGTATTCGAGGTTGTCTGCCGCGAAACCGACAAAGTGCGCCTCGTTGGAGCCCTCCAGGAAGCCATCAACCCAGCCCAGGACAGCATCCGCATCTACCGGCTACCAGCCCACGCCCTCGACGACGTCGAACACCTCGGCAGGCCGCGCCAGACCGATCCACGGGGGGCGTTGGTGATCTAGGAACCCCAAGCTGACGCGAGAAGCCTAGGAGGTTCCGAACCCAAAAAAATGACGAATTGGACAAATCGGACTGCGGTCAATCAACTTTACATCACTAAACTTCTATTCTTGCTGCTCACGAACC # Right flank : AGCGCCATCTCCCAGATGACGCCCCCCTCGCCCTTGCTGCGCCCGGCCTCCGCGCTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTGCGCCCGGCCTCCGCGCTGGGCGAGGATCGCAACAAGTGGCTGGTCGCCGCGGACCTGGCGGTGCCGGCCGCTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGCGCCCGGCCTCCGCGCTGGGCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCTGCGCCCGGCCTCCGCGCCGGGCGAGGATCGCAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.00,-14.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [23.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 243-946 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZWJ01000038.1 Salinispora vitiensis strain CNT-148 B159DRAFT_scaffold00033.33_C, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 243 37 100.0 37 ..................................... TGCCATCACAACCTCCTCAGCCCGTCCAGCACGGACC 317 37 100.0 36 ..................................... GCAGTGCTTGACATCGTGTTGTGGGGTTGCCAGCCT 390 37 100.0 37 ..................................... CGCCTACGCTCGCGACAACCAGCCCGATACTGCCGCC 464 37 100.0 38 ..................................... TCGCCGCGGATACACGCACCTACCGGGCCTTCGCGCCT 539 37 100.0 36 ..................................... GGACAGCAGGCGGCAGAGATCTTCCAGCAAGTCGCG 612 37 100.0 38 ..................................... AGGTGCCGCAGCGCCGAACGGATCCGCGACCGAGACCG 687 37 100.0 38 ..................................... CACGTGCCCTGCCCTAGTGGTGCGCCCTGGGCGGCCAT 762 37 100.0 35 ..................................... GGCGATCTACTGTGAGTGACCCGGCCACTACCCGG 834 37 100.0 39 ..................................... GTCGAGCTCGGCGACCTGGTCGGCCTGGCGCCGGTCAAC 910 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 10 37 100.0 37 GCCGCAATGGAGACCGACCGCTACGGGCCGGTGAAGG # Left flank : AGCTGCCCGGCAGCGGCCTCACCGCGCGTCTCACGGTCCCTCTTCACCCAGTTGGCCAGGGTCCCGCTGTTAATCCCCAGATCACGGGCGACCTGTGCGATCGACTTACCCGTCTCCCGCACGATGCGCACCGCGCCCGCGCGGAACTCCGGATCGAACTGGCGTCTCGTCTCAGCCATGAACCTCTATCCCTCAAGCTCTGGCCTCCACGCTACGAGGGGAAGGGCATTCCCGGTTACGCGG # Right flank : GGGCTCGCGAGCAGCGAGGATAGCCACCCATCATTGGCTAAACACTGACCGCCTGCCTGAAATGCTCCTTTGGCCCCCATTCTGAAGCTCGGAACCTACGGCGCATGGAGCACCCACTTCAGGTTCCTAGATCAACTGCAAGGTGCTCACAGAAAGCGAGCGCACGTTTGTGAAGTTCTCAAGGTTCGAGCCCCGGGCCAGACCGATTGTGATTCACGAGCTGCCATTGAACTGATCTCAGCAAGGAACGGACGCTGAGTCCATAGCCCCGACACCGCGTCAGGCCTGCGCGGGAGGTCGCGGCACAGAACTTCTGGGTTGGCCGACGCAACCGCCTTCTTCGCCCCGCCCTTGGACGCCACCCTCGCCCCTTCCCCCGGTTGCCGTCCGAAAATTCTATTGGTGGGCCGGGTAGGCGACAGACTATGCCCCGCCTGGCTCGTGGGCCTGACGTATCCGATCTTCGTCCCGATGGTTGACCGCAGAATATGGTTGGGCCC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGCAATGGAGACCGACCGCTACGGGCCGGTGAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.90,-10.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [36.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 2 9741-8886 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZWJ01000038.1 Salinispora vitiensis strain CNT-148 B159DRAFT_scaffold00033.33_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 9740 37 100.0 37 ..................................... CGCTGTGACGCTCCCTGCCACGTGCACCACCACCGTT 9666 37 100.0 35 ..................................... CAGTCCAGGTCGATGGTGGTTTCGGCGTCGAACAG 9594 37 100.0 38 ..................................... CCGACCTCCGGCTCAACGGCCGGATCCGACCAGGTCGT 9519 37 100.0 38 ..................................... AGTTTCCGGCTCGCCGACAACCCGACGCTGCCGACCGC 9444 37 100.0 35 ..................................... TGCGGCAAGAGCTATGTGCACGACCTCGAAACGGG 9372 37 100.0 37 ..................................... GAGACGGTGTCCTGCCACGGGGTAGCCAGCCGTGGCA 9298 37 97.3 36 .........................T........... GTTACCGGCGCCACGGTTCCGGGCTCGCCGAGTACG 9225 36 97.3 37 ........-............................ TGCGAAGACCCCAACGGGGACGAGGATGCTGCCCTGC 9152 37 97.3 41 .......T............................. AAGCCCAACGGTACGGCCTCCGTGACCGCGGTCGGCTTCGG 9074 37 91.9 39 .......T...T........C................ CTTGTGGTGTTCCAGCCGGTGGGTGTGGGCGTCCAGGTC 8998 37 81.1 39 T..C..T......A...T...T.C............. GACGAGCGATGTGGTCTGCGTCCTCCCCGGCATGCCATG 8922 37 89.2 0 ....T.....T.G............G........... | ========== ====== ====== ====== ===================================== ========================================= ================== 12 37 96.2 38 CCTTCACCGGCCCGTAGCGGTCGGTCTCCATTGCGGC # Left flank : CCCGCCAAGCCAACCGCCGATCACAGAACCGGATCACCGTCGTGACCAGCAGCTACCCGACAACGCAATGACCCTGGTCTGTCGCCTACCCGGCCCACCAATAGAATTTTCGGACGGCAACCGGGAGAAGGGGCGAGGGTGGCGTCCAAGGGCGGGGCGAAGAAGGCGGTTGCGGCGGCCAACCCAGAAGTTCTGTGTCGCGACCTCCCGTGCAGGCCTGACGCGGTGTCGGGGCTATGGATTCAGCGTCCGTTCCTTGCTGGGATCAGTTCAATGGCAGCTCGTGAATCACAATCGGTCTGGCCCGGGGCTCGAACCTTGACAACTTCACAAAACGCGCGCTCGCTTTCTGTAAGTACCTTGCAGTTGATCTAGGAACCTGAAGTGGGTGCTCCATGCGCCGTAGGTTCCGAGCTTCAGAATGGGGGCCAAAGTAGCAATTCGGGCAGGCGGTCAGTGTCTAGCCAATGATGGGTGGCTATCCTCGCTGCTCCCGAGCC # Right flank : TGGTCCTTTCGGGGAGTGGATGGGTAGCTGTTGGTCTGTGTGTCGCCGCCGCTCGTACTCGCGGGGGAGGTGTGGGCGAGTAGAGTCGCGCGTCAAGCGAAGGTCGGTCCAGTGCTGCTACCTTCTTCCGGTGTCGCTCAGTCCCGGCTCTGTTTGTGACGGTGCCGTGCTCCGTTGGGGCGATGCAGGTCGTGCGACCTCTTGTGGATCGGATGCATGTCCCTGGCCCTAGGTCAGGGCTCCGATCTTTCTGTCGGCAATCGGACGTAGATTAGATGCAGGTCGCGCGACAGGTATGCAGGAAATTCAGAGTAGATTGACCGTTCGTCAAGGTCCTCGGGTAAGTAGCGATGCGGGTGACCTCCACCGAACTCCGCCCCCTTGCAGGGAGTGTCGATGCCCTCTTTTGAGGCCTTTTTCGAGCAAGCGACCGGTGTGCCTCCGTACGGTTATCAGGCTCGGCTAGCGCGCGATGGTCTACCGGCGGTGGTTCAGGCGCC # Questionable array : NO Score: 2.95 # Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.88, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTCACCGGCCCGTAGCGGTCGGTCTCCATTGCGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.90,-10.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //