Array 1 36273-37582 **** Predicted by CRISPRDetect 2.4 *** >NZ_NLSK01000009.1 Escherichia coli strain MOD1-EC5103 MOD1-EC5103_9_length_163801_cov_26.0283, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 36273 29 100.0 32 ............................. GTGACCATAAGGGCATTTCATACTGCCTTGCT 36334 29 100.0 32 ............................. GTGAACGTGACAACGCCCGCGACAGAAACGTC 36395 29 100.0 32 ............................. GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC 36456 29 100.0 32 ............................. AAATTAATTTCGAAACGGGCGTTGATGGTGAA 36517 29 100.0 32 ............................. GCTGGCGCACCTTACGCAAAAATAGACGTAAA 36578 29 100.0 32 ............................. CCAGGGAGCGAAGCTGTGGCCATGCTGAAAGG 36639 29 100.0 32 ............................. GGGTTCTATTTCCTCGGGATTTGCCGACACGC 36700 29 100.0 32 ............................. GTCAACGCTGGTCAGGCGTGGTACTTCCTCCG 36761 29 100.0 32 ............................. GCTGCCGCGCTTTCGGTGTGGGAGCAGTATGA 36822 29 100.0 32 ............................. AAACTCCGTGGTGTAGTGCGTTTGTTGGTGCG 36883 29 100.0 32 ............................. TTGGTATTAACGGGAATGTAGTCACTCCAGGA 36944 29 100.0 32 ............................. GCGATCGTATTTTCCGCTACGTCGCTCAAATG 37005 29 100.0 32 ............................. TCGTTGATGGTGTGATGAGTGTACAAAAAAAA 37066 29 100.0 32 ............................. ACGACTGAATCCGGCGAGGCTATCAACTGGCC 37127 29 100.0 32 ............................. CCGCACACGTCGAGCTGGTGGGGATTAATGCT 37188 29 100.0 32 ............................. CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA 37249 29 96.6 32 ............................C TCTGTGTATTCGCTACCAGCCAGCACCGGTAC 37310 29 100.0 32 ............................. CAGGGTAACTGGCTGCTCCTCAACCATTCCGC 37371 29 96.6 32 ........C.................... GGGTTTTAGCGACCGGACCAGAGTACGCAACA 37432 29 96.6 32 ........C.................... TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT 37493 29 96.6 32 ........C.................... GGAGTGATGAATTGGAAGTAACGGATAACCGC 37554 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 22 29 99.4 32 GTGTTCCCTGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCCGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCACCAGCTATCCCGGAACCTGAATTGCTAGGTGATAGTGGTCACCGGGGGCGCAGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTTGCAATCTGGCTCCTGGAAGTACGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCCCAACTGGCAGGTTGCGGAAATGTGGTCATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAAAGTTTGAATTTAGTTGGTAGATTGTTGTTGTGGAATAAAATTGTTTAAAAACAGATACGTATGCTTAGT # Right flank : GGACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.30,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //