Array 1 1173381-1173880 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR134293.1 Streptococcus canis strain NCTC12191 chromosome 1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 1173381 32 100.0 36 ................................ GCTGAGCAGGCACAAAATAATGCCGTTTCTTATGTC 1173449 32 100.0 34 ................................ AAATGATGCCTTAAAAAATCACGTTGATAGTGAT 1173515 32 100.0 34 ................................ TTGCTATTTTGATAGTACTATAATAACATGTAAA 1173581 32 100.0 34 ................................ TCTTACAACTACTACGACCACGCAGCTTCCGCTG 1173647 32 96.9 35 ......T......................... TTTTTGTTTTGATTACATTCTCGGTATGTCTATCC 1173714 32 96.9 36 ......T......................... TGCGTATTTTACCGTGCTTTTTTGCCTTCTGTCGGG 1173782 32 100.0 35 ................................ ATCAGTTGTTGTGCTACCTTTTGGTGCAGAAGCCT 1173849 32 75.0 0 ......T..G...........AC...A..CTC | ========== ====== ====== ====== ================================ ==================================== ================== 8 32 96.1 35 GTCTCACCCTTCATGGGTGAGTGGATTGAAAT # Left flank : AAGGCCATACGAGGAGATTTAGAAAGCTATCCACCTTTTATGGTTTAGGAGATGTTATATGATGGTTTTAGTTACTTATGATGTAAATACTGAGACATCGGCTGGTAGGAAAAGATTACGTCATGTTGCCAAACTCTGTGTGGACTATGGGCAACGTGTTCAAAATTCTGTTTTTGAATGTTCTGTGACACCCGCAGAATTTGTGGATATAAAACACCGCTTAACACAGATTATTGATGGGGAAACTGATAGTATTCGCTTTTATTTATTGGGTAAGAATTGGCAGAGGCGTGTGGAAACACTTGGTCGCTCAGACAGCTATGACCCAGATAAAGGTGTCTTATTATTGTAAAAACGTTTAGTGCGACTCGAGGTTTCACAGAAAAACCTAGCTTGCTCGCGCAAAAATAACTTAAAAAAGAATCGAAATGGAGATAAAAAGGTTTAAAATGCCTCTGTATTCTCCAGCCGTTTCTCTATAAACTGTGTCATTTGGCGCA # Right flank : CCTATGTTTTTGGCAGTTCTGTTTTGTGATTTTCTCTGTTCACAAGTTTCCAACTGTTTTGTCTCTACTTTTTCTGTCCTATATGCTATAATATGCCTAAATAACTATGGTAAAGGAGTTAGGATGACTAAGGTTCGGTATGGGATTGTGTCGACAGCGCAGGTGGCCCCTCGTTTTATTGAGGGTGTACGCTTTTCGGGCAATGGCGAGGTTGTGGCGGTGTCTAGTCGGTCACTTGATAAGGCAAAGGCTTTTGCGGCAGCGCATCAGTTACCTAAGGCTTATGGTAGTCTTGATGACATGTTGCTGGATACGTCGATTGATGCTATTTATGTGGCAAGTATCAATCAGGATCATTTTCCTACAGCTAGGAAGGCTTTGCTGGCAGACAAGCATGTTCTCGTGGAAAAACCGTTTACCTTGACAACCGCTCAGGCTGAAGAGCTCTTTGCCTTAGCGCAGGAGCGTGGCTTATTTTTGATGGAAGCTCAGAAGGCTGT # Questionable array : NO Score: 9.06 # Score Detail : 1:0, 2:3, 3:3, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACCCTTCATGGGTGAGTGGATTGAAAT # Alternate repeat : GTCTCATCCTTCATGGGTGAGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.50,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 2 1463181-1463348 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR134293.1 Streptococcus canis strain NCTC12191 chromosome 1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1463181 36 100.0 30 .................................... AATTGTCTGTGTAAACATCCTCATGCACAC 1463247 36 100.0 30 .................................... CAGTTCAGGTAATGGCATCCAGTACAATCC 1463313 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 3 36 100.0 30 GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Left flank : TTAGCAGCCACAATAACGGAATTGATTGCTTATGAATGCTTAGAAAATGAGTTGGATTTAGAATACGATGAGATCACCATTTTGGAACTGATAAAAGCTCTGGGAGTCAAGGTTGAAACACAAAGTGATACTATCTTTGAAAAGTGTCTTGAAATTTTACAAGTTTTCAAATACCTTTCAAAAAAGAAACTTTTAATTTTTATTAATTGTGGTTCTTACCTTACAAAAGAAGAATTATTGAAGATAAGAGAATATATTGACTTGTCTCAGCAAACAGTTCTTTTTATAGAACCAAGAAAGTTATACAATATTCCCCAATATATTTTAGATGAAGATTATTTTTTGATAAAAGAACATACAACTTAGACTACATTCGTAAATGTTGATTCTATAGGTTTTTTGGCGTATAATGGAGCTATGAAAAGGACTGTTTAAGACTAAAGTCTAGCTAAGACAAATAGTGCGATTACGAAAAATTGTGGACGAAAATAGTCTACGAG # Right flank : CATCAACCTGTCTTAAATTTCTTTCTGACATGTTTTAGTGAAAAGGCAACACTTTTCTGTACAGATTTTATAAAGTGCTTTTTCTAAACGACTAAACGTTTGGTCATCGGTGTTTGGTAGTTGAGGCAGCTGTGAATGCGGTGGTGATTCCACCAGTGGACATAGTCCTTAGTTTTGAGGGCCAATTCTTCTAGCGTCTGGAAAGTTTCCTGGTGGACAAATTCCATTTTGAAAGCACGATAGGTACTTTCAGCAACGGCATTGTCGTAAGGACAACCTGCTTGACTAAGAGAGCGGGTGATTCCGAAGGCCTCCAACATGTCATCAATCAAAGTATTATCAAACTCCTTCCCACGATCTGACTGGAATATCTTGACTTTGGTCAGAGCGTAAGGGATGCTCTGAATCGCTTGTTTGACCAATTCGGGGGTCTTGTGCCAACCAACTGACAGACCGATGATTTCACGATTGAAGAGGTCAATAATCAAGCAAACATAAGC # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 3 1764609-1764374 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR134293.1 Streptococcus canis strain NCTC12191 chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1764608 36 100.0 30 .................................... TCAATATTTTTTTCAATGGTAAGATCATTC 1764542 36 100.0 30 .................................... CGAGCGGGGCCACCGACCTGAAGGCTATCC 1764476 36 100.0 31 .................................... TCACACTCAAAGTTTACGCTCATCAGATAGA 1764409 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 4 36 100.0 31 GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Left flank : GTCGGTAATGGTTGGGCTTATGTTTGCTTGATTATTGACCTCTTCAATCGTGAAATCATCGGTCTGTCAGTTGGTTGGCACAAGACCCCCGAATTGGTCAAACAAGCGATTCAGAGCATCCCTTACGCTCTGACCAAAGTCAAGATATTCCAGTCAGATCGTGGGAAGGAGTTTGATAATACTTTGATTGATGACATGTTGGAGGCCTTCGGAATCACCCGCTCTCTTAGTCAAGCAGGTTGTCCTTACGACAATGCCGTTGCTGAAAGTACCTATCGTGCTTTCAAAATGGAATTTGTCCACCAGGAAACTTTCCAGACGCTAGAAGAATTGGCCCTCAAAACTAAGGACTATGTCCACTGGTGGAATCACCACCGCATTCACAGCTGCCTCAACTACCAAACACCGATGACCAAACGTTTAGTCGTTTAGAAAAAGCACTTTATAAAATCTGTACAGAAAAGTGTTGCCTTTTCACAATTTACCTTTGTACTTCCGAA # Right flank : AGATAATACCGCTTGTTGTTGATCTTCGCTTCTTTCTATTAAAATGTTTTCATGTTATAATAGTCAAAAGGAGAAAGAGAGTGGAGCGATGGAACAAACATTTTTTATGATTAAGCCTGATGGGGTGAAACGAGGGTTAGTTGGGGAGATTTTGCGACGTATTGAGCGGCGAGGGTTTACATTTGAACGCTTGGAGTTGCGGCAAGCTAGCTCGGAACTCTTGGTTAAGCATTATGAGGCCTTGGTTGCGAAGCCATTTTATCCTGAGTTGGAAGCTTACATGACCAGTGGCCCTGTTTTAATTGGGGTACTTTCTGGGAATCGGGTGGTTTCGTCTTGGCGAACCATGATGGGGGTAACTAATCCCAAAGATGCTCTTCCTGGCACTATTCGAGGTGATTTTGCTCAGGCTCCTGGTGATGATGGTGGCATTTTTAACGTGGTTCATGGGTCTGATTCTCTAGATTCTGCTAAGCGTGAGATTGCCCTTTGGTTTAACC # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 4 1766293-1765861 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR134293.1 Streptococcus canis strain NCTC12191 chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1766292 36 100.0 30 .................................... GGTCTGTGAATTTAAAAACGCAAGGACAGC 1766226 36 100.0 30 .................................... GATAGCAGTACCGCTGACAACATTGTTGGC 1766160 36 100.0 30 .................................... TCAAAAATTTTGATGTAATCATCGACAAGC 1766094 36 100.0 30 .................................... GTATCCATCTTTTTTAATGGATATATATAA 1766028 36 100.0 30 .................................... TAGAAGAAAGAAAGATGTCAATGAGTGAAT 1765962 36 100.0 30 .................................... GACTACAGGTTTTGTAGCGCTAGGGCTAGA 1765896 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 7 36 100.0 30 GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Left flank : CACAGCCTGACGACGTCCACAGCGAGCCTTGTTCGCCTTATAGTAATGATAGCACTCAGTTGGCTGAATGCCCTTGTTTGAGGAAAGTCACTACCTTATGAATGGTTTGACGGCTTCGCTTAAGTGATTGCGCAATTTCGAGGACAGAAGTATCTTTCTCAACAGATGCCTCTATCATTACGAGCTCATTTGTGGTAAGATGGGCATGGGTCATTTATGTTACTTCCTTTCAGACAAATGTGGTGTTTATCTGAGCCTAACATAGATGGCTTTTTCTGTCTAATTTAATTTTACAAATTGGGCACATAAAAAATTGTAAGGCGACAGAACAAAGGAGAAAAGAAGGTTTCATGCGTTTGTCGTGCTGGGATAAGAAGGGAAGTTGATTCTATAGGTTTTTTGGCGTATAATGGAGCTATGAAAAGGACTGTTTAAGACTAAAGTCTAGCTAAGACAAATAGTGCGATTACGAAAAATTGTGGACGAAAATAGTCTACGAG # Right flank : TTGACAATCAATGAATAGGTTACACTAAACTAGACAGTCTTATAAAGTGTTCTACACTAAAGAAAATAGGAGAATATTATGTCTAGAAAAATACGTCGCCACTTCGCCGACGACTTTAAGCAACAAATCGTTGACCTTCACAATGCAGGGATGAAACGAAGTGAGCTTATCAAAGAATATGAGTTAACCCCATCAACCTTCGATAAGTGGGTACGTCAGGCAAAAACAACTGGTTCCTTTAAAACTATTGATAATCTTACAGATGAGCAGCGTGAGCTGATGGAACTCCGAAAGCGTAATAAAGAACTCGAAATGCAGCTAGATATCCTAAAGCAAGCGGCGGTGATTATGGCACGAAAAGAGAAGTAATCACTGCTAACAAAGACAAATATAGTATTTCAGCCATGTGTCGGTGGTTGGGTATTCCTCGTTCTAGCTATTACTACAAAGCTGTGGAATCCGTATCTGATACCGAGCTTGAAGAAAAAATCAAAGCTATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //