Array 1 1-204 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_VAUU02000051.1 Photobacterium damselae subsp. damselae strain 164dp-OG2 Contig_000053, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
         1	    24	  85.7	    32	----........................	TTTGGTGGTTAATTGGTGCTATAAACAAACAA	
        57	    28	 100.0	    32	............................	GTAAACGCCTGGCTGATTGGCCAACTCTTTAA	
       117	    28	 100.0	    32	............................	AATCGCACATTGCCTCTTGCTCGTATCTTTAG	
       177	    28	  96.4	     0	.................T..........	|                               	
==========	======	======	======	============================	================================	==================
         4	    28	  95.5	    32	CTTCACTGCCGAGTAGGCAGCTTAGAAA	                                	       

# Left flank :   |
# Right flank :  AAATCCACTGCAGATCGGGGCGTTACTCCCTTTCTTCACTACCGAATAGGTAGATAAAACTTAGACATATTTTACTCTTTAATCTGATATTTCGTCATTCTTGCCAATAAAGTCGCATTTTAAATTCATCCTGTTGAATATACTAATGCCATGATAGTTAACGCATTGATATGATGTTGAAGATGAAAAAGGACTTTTCTCCTAGCGAGCTTAAAACCATACTCCACTCAAAACGTGCCAATCTTTATTATCTTCAGCATTGTCGAGTGCTAGTAAACAGTGGGCGAGTTGAATATGTTACTGATGAGGGTAAAGAGAGTTTATATTGGAATATCCCCATCGCCAATACGACCGCCATTATGCTTGGAACAGGTACATCGGTGACCCAAGCTGCTATGCGAGAGTTGGCTAAAGCTGGTGTATTAGTCGGTTTTTGTGGTGGCGGTGGTACTCCGCTTTTTTCAGGTAATGAAGTTCAAGTGGATGTCTCTTGGCTTTTA

# Questionable array : NO	 Score: 5.64
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTTCACTGCCGAGTAGGCAGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [8,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTTCACTGCCGAGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-0.80,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
//


Array 1 81887-81678 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_VAUU02000056.1 Photobacterium damselae subsp. damselae strain 164dp-OG2 Contig_000058, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
     81886	    28	 100.0	    32	............................	TTAATAACATCTAGAACCAATTCACCAACTTT	
     81826	    28	 100.0	    32	............................	GGTATCGATGCGGAAGCGCAAACATGGTCCCA	
     81766	    28	 100.0	    32	............................	ACAATAGGGATATTATTATGTCTACACTAACC	
     81706	    28	  82.1	     0	...........CA........C..CT..	|                               	A [81684]
==========	======	======	======	============================	================================	==================
         4	    28	  95.5	    32	CTTCACTGCCGAGTAGGCAGCTTAGAAA	                                	       

# Left flank :   |
# Right flank :  GTAAACTTTGGAGCTAACCTTTGCTTTTGGTATCCTTGGTGCTTATCGCTAAGATCATTAGCAAAAGCATAAATATAGGTACTACATGCTCACAATCTCAAACAATGTGACGATTTCCGATTGGGAGATTGAACTTAACGCTATTCGCTCTGCGGGAAATGGTGGGCAAAACGTCAATAAAGTAGCCACAGCAATTCATCTTAGATTTGATATTAAGAAATCATCACTGCCAGCTATTTATAAAGAAAAATTACTTAAGTTATCAGACAGTCGAATTTCTTCTGATGGTGTGATCATCATTAAATCGCAGCAATATCGAACCCAACTGCAAAATAAAGAAGCTGCTCTTGAGCGATTAAAAGAGTTGATTTTATCTGCGATGGTTGTACAAAAAGCTCGCCGTCCAACTAAGCCAACCAAAAACTCCCAGCGTCGTCGTTTAGAGTCAAAAACCAAAAGGGGAACGACTAAAACGATGAGAAAGAAGGTTGATTATTAAC

# Questionable array : NO	 Score: 5.64
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTTCACTGCCGAGTAGGCAGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [6,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched CTTCACTGCCGAGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.70,-8.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [6-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [61.7-0.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,5.65   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
//