Array 1 81755-75900 **** Predicted by CRISPRDetect 2.4 *** >NZ_NEPX01000005.1 Acinetobacter baumannii strain KUSSH14 NODE_5_length_142959_cov_8.39968, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 81754 30 96.7 30 .............................A CTGAAAGAGTAACTAACTGTTTAAAGAAAC 81694 30 96.7 30 .............................A TTCCTATTTATTTTGAGCCTAATACACCAA 81634 30 100.0 30 .............................. TCCAACGAAATTATGACGCTGACAAGTCTC 81574 30 100.0 30 .............................. CACAAGACCATACTCACGAATAAATTGTTT 81514 30 93.3 30 ............................AA CAGGAACTTTTGCAGGTCGTAGCCAAAGAA 81454 30 96.7 31 .............................G ATTCCGAATTATTTGCGGATGAGAGCAGTAA 81393 30 93.3 30 ............................AA CAGGAACTTTTGCAGGTCGTAGCCAAAGAA 81333 30 96.7 30 ............................A. CGTCACAGCGCACTGGTTACTTAAAACAGG 81273 30 96.7 30 ............................A. CAACAACTTTATTAGCCTTCACAAGACCAT 81213 30 93.3 30 ............................GA TACGGGTAAACCGTATGAATGGGTTGATTT 81153 30 93.3 30 ............................AA AGATATTACTGGTGTATAGAGCTGAAGATT 81093 30 96.7 30 .............................A ATTCACTTGATGCAGGTGAATCAATATTAA 81033 30 100.0 30 .............................. TAGATACAGGCGTTGATTCTGCAAAAGTGG 80973 30 96.7 30 ............................G. TACCCAACCCTTTATCAATCTCTCGACCAA 80913 30 93.3 30 ............................AG GGTGCGCTTGCACGTCAAGAATATCTTGGT 80853 30 93.3 30 ............................AA CGAGATACTGTTTCAGGAGATTCACCCAAA 80793 30 100.0 30 .............................. TTTTTAAGTGTTTCATCCACAACATCATAA 80733 30 93.3 30 ............................AC CATCAATCGTGAAGCATCAAGGCGATAAAG 80673 30 96.7 30 .............................G CAAGACAGCTATATAGAACAGTTGGAAAAT 80613 30 96.7 30 ............................A. AACTTGCTTGTACGTTTCTAATCTTCAGTT 80553 30 93.3 30 ............................GG TGGAAAATGTACATAGACATTGCACCGAGA 80493 30 93.3 30 ............................CC CAAAGGCTCAAGAGTTGAGCGCGTCAACTC 80433 30 100.0 30 .............................. GCGAGTCAAGCCGACAAAGTAATCGCTATG 80373 30 93.3 30 ............................AC GGTGTCAGAGTTTTAGAACTCAATGATGGC 80313 30 93.3 30 ............................AG TTAATACCCGTTGGCCATATTGTTCAGTTT 80253 30 100.0 30 .............................. AGTCGCATTAGCGCAAAAGCTACGTGGATT 80193 30 96.7 30 .............................A ATGATGAAATCGATGAAATGTGGCGCTATG 80133 30 100.0 30 .............................. GTTGCAACACCGCCACCGCTGTGCCTTTTG 80073 30 100.0 30 .............................. CAATGTGTTTAAGATCGGGTCAAAAGCTAC 80013 30 93.3 30 ............................CC CAACTTTTTAAATATTTAATTCTTATAAGA 79953 30 93.3 30 ............................AA CGAGAAATTGGAACTACAAAAGAACCAAAA 79893 30 93.3 30 ............................GA TTATTCTGGTTATAACTTTGTCTGTGTAAT 79833 30 96.7 30 ............................A. CTTCCGCAATGGCCTTTTTGAATGCTTCAT 79773 30 93.3 30 ............................AG CCACGTCAACAGCAGCATTGGCATTAGTAA 79713 30 93.3 30 ............................GC TAAAGGCTAAAGCAACCAAGGTGAATCTTA 79653 30 93.3 30 ............................GA CGAGCAACACGTCAACGAACTCAAAGCAAA 79593 30 93.3 30 ............................GA CATGGCGAGTTGCAGCAGGAATACCATAAT 79533 30 93.3 30 ............................GA GTAATGCAGCACCAACAGCAGTAATCGCAG 79473 30 93.3 30 ............................CA AACGTGGGTTACATCTAGTTGCCTGAGGAG 79413 30 96.7 30 .............................A ACTTAGACTGAATATCTGATGCTAAAGATT 79353 30 93.3 30 ............................AG CCGGTGTTGATCTGATATGCGTTAGCCATT 79293 30 96.7 30 ............................A. ACGCGCCAAACATGAATGGGTTTAAAACGT 79233 30 100.0 30 .............................. TGTGCCTCAATATGATTTCAAATATGGTTT 79173 30 93.3 30 ............................GC CAGGGGCAACATACCGCGCTAACGTTAGTG 79113 30 93.3 30 ............................GC AGTATTGACTGTCGGACTTGTGACAACCTG 79053 30 93.3 30 ............................GA CAGGAACCGTCACTGAAAGCGCACAGGCTC 78993 30 100.0 30 .............................. GTAACAACTTTAATGGAGAAGCCTTAATCT 78933 30 96.7 30 ............................A. AACGAGAAGCGTTGCGTAGACTTACAACTC 78873 30 96.7 30 .............................C TTGTTATTTCTGGTAATAAATATCAGAACA 78813 30 96.7 30 .............................C AAATCTAAGCCATGCTCATTAGGCATAGGT 78753 30 96.7 30 ............................A. CCTGTCTCTTGGTCAATCTTGGCACGTAGG 78693 30 96.7 30 ............................A. TACCGACTGATTGTTGAGTGGCAATGTTAA 78633 30 100.0 30 .............................. ACACATGAAGTCAGCAAATGCCACCATGTT 78573 30 100.0 30 .............................. GAATCGGCCGCTTTGCGTATAAACACCACC 78513 30 93.3 30 ............................GA GAATGATTTAAATTGCATTAAGCCTTTAAA 78453 30 96.7 30 .............................G GAAGTCATGAATGTAGGTGTTGAGGATGGC 78393 30 93.3 30 ............................GA ATTGCACTTGCTAAGCCAATAATGCCAACT 78333 30 96.7 30 .............................G ATGCGGGTTGTCCACCAGTTATGACTACTT 78273 30 93.3 30 ............................CC AAGCTGTGAATGTTGGTAATGCTTTAAGCG 78213 30 93.3 30 ............................CG TCAAAACAATCAAAAAAGCAATGAGTACAA 78153 30 93.3 30 ............................AG TGAATGGGATTTATTCGCAAGGTGATATTA 78093 30 100.0 30 .............................. GTTTCAGTTGCATAGTCAAACGATGAGAAC 78033 30 96.7 30 ............................A. TAGCAGGTGATTACGCAGTCTTATCTAATG 77973 30 96.7 30 ............................A. TAAGCAAGGGCTGACCCCGACCGCCGAGCA 77913 30 96.7 31 ............................A. TGACTTACAGCGTTATGAGAGATCCCTAGTT 77852 30 96.7 30 .............................G ATGATTGGATAGAGATTCATGCGTTAGATT 77792 30 96.7 30 ............................G. AAAAAAGAACATTTCCCGCCAAAATTGACG 77732 30 100.0 30 .............................. TGGCAACCAGTCGCCCTATGCGACCTGATA 77672 30 96.7 30 .............................G TAAAAAAGTTTAATAATTTTTTCAGTGAAT 77612 30 96.7 30 .............................A CAGCAATAACGACCAAACCGATATAGGTAA 77552 30 96.7 30 ............................A. ACGAACATCATTTACTTGCTGAAGTTGCTT 77492 30 96.7 30 ............................A. GCTCTCAATAATTCGCAAGTAAAAGTGGAT 77432 30 93.3 31 ............................AA AAAGTTTTTTTGACAATCAAGCCGGCAAGTT 77371 30 96.7 31 .............................G CATCGAAGTCATAGAACGCTTTGAGTTTCCA 77310 30 93.3 30 ............................GC AAGTGTCACCTTTAAGTGCACGGAAGAAAT 77250 30 96.7 30 .............................C CATTCTCGCTAAGTGGCATCACACGCGATG 77190 30 100.0 30 .............................. GGTTGTTTAGTAAGTTCAAAGCCCGTTGTA 77130 30 93.3 30 ............................CA ATGGATTTAAAGATTTCAACCGCTTGGGAG 77070 30 93.3 30 ............................AG TTGATATGATTATTAATATTAAAGTTGTTT 77010 30 96.7 30 .............................G TGCCCATTCCCGCAAACACGGCGCAACGCT 76950 30 93.3 30 ............................CA TGACCCAACCACGTAAATTCATACCACACG 76890 30 93.3 30 ............................GC TCCGTAATTAATCAAGAAATAATCAAATTT 76830 30 93.3 30 ............................AG TAGTTGCACCAGACTCCGCACAATCTAAAA 76770 30 93.3 30 ............................AG CAAATAGATCAACTGGTGCGCCCTATGAAT 76710 30 96.7 30 ............................A. CATCGAAATTTAGTTCTAATTCTTTAATTT 76650 30 93.3 30 ............................AG TCTTTAATGTCGGCAACATGCTGTGCAAAA 76590 30 96.7 30 ............................G. AAATATGCTGCTTTAACCCGCCAAACGAAT 76530 30 96.7 30 .............................G CATTAAGACGAATGCGGGCAATTGGTAATG 76470 30 93.3 30 ............................GA GATTCAAGTTTCACCGGATGGCACAAGTAA 76410 30 93.3 30 ............................AC CAGAAAAGCAGAGTAAAGCTTCACAGCCAT 76350 30 96.7 31 ............................G. AAAAAAGAACATTTCCAGCAAAAATTGACGA 76289 30 100.0 30 .............................. GCTGCCTGCAAACTTGTTTGGGGCTTTATG 76229 30 93.3 30 ............................AC TGGAATTCAGCAGTAAATAAGGGGTTAAGA 76169 30 100.0 30 .............................. TAAAGCTAAATGAGGGTTAAACCTAAGAAA 76109 30 90.0 30 .......T....................AA CGTGAACAATTGTTTTAGCTTTGAACATTA 76049 30 90.0 30 .............C...T..........G. TACTGGGTTGCGGAATATATTCGCAATTAT 75989 30 86.7 30 A......A.........T..........A. TTTGATCTTTACTTATTCTCGCTTCAAACA 75929 30 73.3 0 .......A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 98 30 95.4 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCTACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAACC # Questionable array : NO Score: 5.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.20, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //