Array 1 7057803-7056919 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP023202.1 Streptomyces xinghaiensis S187 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 7057802 29 89.7 32 ..G.....A...T................ TACGACAGCCAGGCCTCGCCCTGGCGGATGGC 7057741 29 93.1 32 ..G........A................. CCAGCCGCGGATGCGGTGGGTGCAGCGGGTGC 7057680 29 96.6 32 ..G.......................... GCCGCGGTCGACGGCCTCGTTGACGCCGGGGT 7057619 29 100.0 32 ............................. TTCACCCGGCGCCGCGGGTCCGGCGTGAACGC 7057558 29 96.6 32 ....G........................ GTCCGGGCACGGGATTGGTCGGCCATTCAGCC 7057497 29 100.0 32 ............................. CGTCCGCAGGGTTCGCCGCCCTCAAGGACGAC 7057436 29 100.0 32 ............................. GTCGAGGCCCGGACGCTGGTCCTGGCCGCCGC 7057375 29 100.0 32 ............................. CCCAAGACCCGCCGCAGCCGGCGCACCGTCCG 7057314 29 100.0 32 ............................. CGTCCGCAGGGTTCGCCGCCCTCAAGGACGAC 7057253 29 100.0 32 ............................. CGGGCCGCCCTCCACCACCGACGGCACTGACT 7057192 29 100.0 32 ............................. GCGAGACTCTGCCTGTTCCGCTGCTACGCGCT 7057131 29 96.6 32 .....T....................... TTTGCCGGCCGCAGCCGCTCGAATCTCGGAAC 7057070 29 93.1 32 ............T...........G.... CTAACTCATCAGGTGAAAGCTGAATACTCAGC 7057009 29 100.0 32 ............................. CCCTCGACGCTGGTGATCTCGGACTGGATGGT 7056948 29 75.9 0 ............T......C..C..TGTT | C [7056926] ========== ====== ====== ====== ============================= ================================ ================== 15 29 96.1 32 GTCCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : TCCATCGGCTCCCCGACATCCTCCAGCGGTGGGTTGATTTCATCGAACGGGTCGAAGCCGAACGCCCGCGCGTGGAGGAGCTCCAGGCCTACTATCGTGACCACGGACAGTTGCCGCCCGAGCACGAGAACGAGTCGGCCGAAGGTGCCGCACTGTACCGGCAGTGGAAGACACGGACGGAGCACCAAGGAGCCGCGTGACCTGGCACGTGCATATCACCGAGCACACCTTCCGGATGCTCCGCGGCCTCTCCGACAATGCCCTCGGTGAAGTGTTCGACCTCTTCCGCAGCCTCGAACGCGACCCCTATGCGGTCGCCCAGCCGACGGGCATACCCGACGGCAGGACCTTCGAGGCCGCCTTCCCCCACGGCATCCTCACCGTCATGGTCAACGACGAGACTGGGCGGATCACTCCCATCAGCGTTGTCGCCCTCTAACCCCACACACCGAAGCCCCGACGGCCGGCCCGTGCAGCGGGGGCTTCGTCGCGTCTACGGT # Right flank : CACGATGACGGGGGTCGGCGGTGAACCTCAGGATCCGTGGGCTTGCAGGTCGGCGAAGGTGGCAACCGTCGCCGACCACGCCCGCTCGTTCGGAACACGATGCCACCCGATCAGCGAGTCGGGCGTGACGGTGTCGGGCCGGATCATGTAGCCGAGCATGACGAGTTCGCACCCGGCCGCCGCCGCAGCGTCCGGCGGGAACTCCGGCCAGTCCGGCCACTGGTGTAGTTCCCGTTCGGCAACTGGCTGCGAACTCCCCTGTTGTACGACCTGCAGCACCCATCCCTTCTGTGCCGCTCTGCACACAGCCGTGAGATCGTGGTGCTTCTCTGTCGTCATATCGGGACACTAACGGGCCCGAAGGCTGCGGGCCCCTTCCAGGGCCGCCATGGCGGATCCGGCCGTCTCAGGACGGGGCCTGCCGTGCAGCTGCGCCAGCCGCGTGTCTAGCAGGTACTGGGCGGTGCGCTGCCGGGCGGCGTCGGCGGCCTTGGCCGCGG # Questionable array : NO Score: 5.98 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-25.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 7061170-7058516 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP023202.1 Streptomyces xinghaiensis S187 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 7061169 29 100.0 32 ............................. AGGACGCCGTCCTGCAGCGGGTTGCGGTCCAT 7061108 29 100.0 32 ............................. TCGACGGCGTCTCCGCCCTGGCGACCGCCATG 7061047 29 96.6 33 ............................A GCGGACGGCGCCCTCCACGGCGTCGTACTCCGG 7060985 29 100.0 32 ............................. TGGTGAACGTGAATCCCCTCTCTACTGTTCAC 7060924 29 100.0 32 ............................. CGCCTCGCCGCGTACAAGCTCCTCGCGGCCTA 7060863 29 100.0 32 ............................. TGCGTCGTACCATCGCTGATGACGACCTTCCT 7060802 29 100.0 32 ............................. GTGGCGGTCCTTGAGGCAGGGGCCCGTGGCGG 7060741 29 100.0 32 ............................. TCCCAGCGCTTTTCGGCGGGCGTCAGGGTCTC 7060680 29 100.0 32 ............................. GTCAGGTCTTCGTTGCGGAGTTGGGCGGCGGC 7060619 29 100.0 32 ............................. ACCCTCCTTGTCGTCGCCCTGGTGGCCGTCGT 7060558 29 100.0 32 ............................. TCCGAGTCCGCGTCCGGCCTCGAGGGCCTGTT 7060497 29 100.0 32 ............................. AACGAATGGTTTTGCATCTCCGTGCGCCGCCC 7060436 29 100.0 32 ............................. CTGGGTCGCCGACCGGCCGGCCCACACCGCCA 7060375 29 100.0 32 ............................. TAGCCGATCGTGGTGACCGGGTCGGCGTGGTC 7060314 29 100.0 32 ............................. GCGCCCACCTGGCCATAGTCGATGACCCGATC 7060253 29 100.0 32 ............................. CGGGACTTGCGGGCCGACTTGGACCGGGCCTC 7060192 29 96.6 32 ............................C TCCTCCGCGGCAGTGTCGTTCATCGGGTCGAT 7060131 29 100.0 32 ............................. ACCTTGGCGAACCAGTCGAAGCCTTTGCGTTC 7060070 29 100.0 32 ............................. TCCGCCAGAACCTCGCCACCGTTGTGAACGAC 7060009 29 100.0 32 ............................. CGGATCGGGCCGACCGGCCGCACGATCAGGAT 7059948 29 96.6 32 ............................C CAGCCGAGGCCCGGCCGCCCCGCGCCTGATGA 7059887 29 100.0 32 ............................. TTGAAGCGCATCACCTCGTCCAGGCGGTGGAC 7059826 29 100.0 32 ............................. ACCAGCGGCGGGACGGCGCTGACGCTGAGGAC 7059765 29 96.6 33 ............................A GCAGGCGGTGAGCCGGGAACACGGGCCTGAGGG 7059703 29 100.0 32 ............................. AAATCGCCGGTCCTCGCCGAGCGGCTGACCCA 7059642 29 100.0 32 ............................. AGGTCGACGGCGGACGGCTGGGAGTGAAGGAG 7059581 29 100.0 32 ............................. CGGCCGACGTGCTGCACCGGCGACCGGAACGG 7059520 29 100.0 32 ............................. CAAGGGCGTCGGCCTCGATGCTGCGTGCGGTG 7059459 29 100.0 32 ............................. TGGCTGCGCCCGCGCGCCTGGTGCGAGCCGTG 7059398 29 100.0 32 ............................. AGGACGCCCGCCACTTCCTGGAGGCGTGGTCC 7059337 29 100.0 32 ............................. CAGATCGAGCAGGCCGTTGACGACGAGGACAC 7059276 29 100.0 32 ............................. CCGGCGGAATCGGTCACAGTCAATTCCGTGTC 7059215 29 100.0 32 ............................. GCGTCCACGACTCGCTCACCACCCTCGGCATC 7059154 29 100.0 32 ............................. GGGTGTTGATCATGGGGAAGCGAGGGCCGGCG 7059093 29 100.0 32 ............................. GACGACCTGTTCGCCGCGATCACCGCGGCGCT 7059032 29 100.0 32 ............................. CAGCGCCGCGGCCGGTGGATGGCCGTCGTCGA 7058971 29 100.0 32 ............................. ACGTCCACAAACGCCGTGCCGAGATCCCCGAC 7058910 29 100.0 32 ............................. TACAGGGCCCGCGTGCTGCGCGTGCCCGAGGG 7058849 29 100.0 32 ............................. TACCGCGCCCCTTCGTCGCTCATCAACGCTTC 7058788 29 100.0 32 ............................. ATCGTCTCCCATTCGTCTCCCACTGGGAGAAA 7058727 29 96.6 32 ......................C...... CAGTGGAGAGCGGCATTCTCGGATGCTCGCTT 7058666 29 96.6 32 ..........T.................. CGGCCCCTCGTCGGCGGCTTCCGGGCCGACGC 7058605 29 100.0 32 ............................. AGGTACCGCGCACCCTTCCACATCAAACGGCG 7058544 29 96.6 0 ...G......................... | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.5 32 GTCCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : TCGCTCTCGGCACCCGGGGCTCTCAGATAGACCGGCTCGTCGCGCACAGCCGCGAACGCCGCCGGCACCTGAGCCTGAAACGGCGGCGTGATCTTGCCCAGGTCGTGCAACCCGGCCCAGAACGACAGCACAGCCCGCGTCTCCCCCGGAGGCAAGCCCAGAGCATCAGCCAGACGCTGCCGCATCCGCTCGCCGAGCAAACCGTCCCAAAGCGCGGAGAACACAGCGGCGGTGTCGAGCAGGTGACACACCACCGGGTACGGCCGCGGTAAGCCGTTCTCCTTTCCCCACATGCGGGGGTCAAGGAGAGGTGTTCCGCCGGCCGGGGCATCGCTGTTCATCATGTGCCAGAGGTAGCAGGCGACACTGACAACGCCAGTGCGCCCATACACTGACCTGTCATGACCCCACCTCACAACGCCGGTTCCGTGCGGGTGTGGGTGCGGCTGCACAATGGCAAAGTAATTGCAAAGGCGCTCTAGAAGACCAGGTCAGGAAGT # Right flank : CCCAGCCGGTTGACCGCGCACCCTGCTGTGTGCGCAACGGGGTGCGCGAGGGCGACCCCGGCCATTACGCTGCAAAGCGATATCGGAATGGTCTATCAGATCTTGGGGTCTAGGTGAGCGGCGGACAGCAGTGGACGATCGACAGCATCGCGCACGCCCTTCCGCACTCCGAGCTGCGTGCCACCTTCATGCGTGAGGCGTCCTTCACCGACGTCCATCGGCTCCCCGACATCCTCCAGCGGTGGGTTGATTTCATCGAACGGGTCGAAGCCGAACGCCCGCGCGTGGAGGAGCTCCAGGCCTACTATCGTGACCACGGACAGTTGCCGCCCGAGCACGAGAACGAGTCGGCCGAAGGTGCCGCACTGTACCGGCAGTGGAAGACACGGACGGAGCACCAAGGAGCCGCGTGACCTGGCACGTGCATATCACCGAGCACACCTTCCGGATGCTCCGCGGCCTCTCCGACAATGCCCTCGGTGAAGTGTTCGACCTCTTCC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 7070907-7073070 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP023202.1 Streptomyces xinghaiensis S187 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 7070907 29 100.0 32 ............................. GTCGCCACAGCCCTCCAGCACCCCCACCCCGG 7070968 29 100.0 32 ............................. GGGCACCCATGCCAGCACCCAGCCGGGCCCCG 7071029 29 100.0 32 ............................. GACGCAGCCCGCGACGGAACCATGGGCGACCC 7071090 29 100.0 30 ............................. ACCGACGACATCCGCGCCCTCTACAAGGAC 7071149 29 96.6 32 A............................ GCGCGGGCGCAGCGGTTCGCCGACAGTCATGT 7071210 29 100.0 32 ............................. GACCCCGACATGGCCCGCAACGACAACGCCGC 7071271 29 100.0 32 ............................. CCAGCGCCGGCAGTCGTCGCCGAGACGTTCGG 7071332 29 100.0 32 ............................. GAACATCGTGACCATCCTCTCCGCCGAGATCG 7071393 29 100.0 32 ............................. GACGTGTCTATCCTCCGCGACCGCGCCGGGGG 7071454 29 100.0 32 ............................. ATGACGGGCCAGTCGGGCGCCTCGGGGTCGGC 7071515 29 100.0 32 ............................. GGCAGCAAGCGCCGCCGCGTCCCGCTCCACCC 7071576 29 100.0 32 ............................. ACTGGGCCGGTCCGCCCGGCTGGTCCTCGCCC 7071637 29 100.0 32 ............................. TACGCAGCGACTGTGTCCTTGCCTGCTCGTGC 7071698 29 100.0 32 ............................. TTGTCCGCGACGGGCCGGGACCTGTTCCACCA 7071759 29 96.6 32 ............................C ACGACCGCATCGCGGCGGGCGGAACCCACAGC 7071820 29 100.0 32 ............................. CCGATCAGGTCTGGGAGTGCCTGATGGAGGGC 7071881 29 100.0 32 ............................. GTCCGCACCACCGCCGGCAGCTCGATGGCGAA 7071942 29 96.6 32 ............................A CAGTTCTCCTTCGCCTACGACGTCGGCGAGGG 7072003 29 100.0 32 ............................. CGCGGGGAGACGGCGCTCACCGGATACACGAG 7072064 29 100.0 32 ............................. CCCTCGGCCAGATCGCTCCAGCGGAGGGCGGA 7072125 29 100.0 31 ............................. CCGAGGTAGTGCATGACTCCGTGCCGCTTCG 7072185 29 100.0 32 ............................. TTGGCGTTCGGGATCTCAGGCTGGTTGACGAG 7072246 29 100.0 32 ............................. CCCGGACCCGTCATCGAGCACGAGCGGCTGAC 7072307 29 100.0 32 ............................. CTGACGTTCACCGGTCCGTCCGGGGCGGCCGG 7072368 29 100.0 32 ............................. TTCAAGACCCGCCGCACCAGCCGGCGCGTGAA 7072429 29 96.6 32 ............................A CCGACCCCGTCGTCATCGGCCTCATCGCCGCC 7072490 29 100.0 32 ............................. CGTGAGCTGTTCTCCGATGACGACGTCGCTCT 7072551 29 100.0 32 ............................. CCCGGATGATGCGGGCCGCGGCCGGCCGGACG 7072612 29 96.6 32 ..................C.......... TCCCCTGAGTCCCATCAGTCCCCCCGCGCGGG 7072673 29 100.0 32 ............................. CACGGCGGGATCGCCGAGGCCGTCGCCGCCGC 7072734 29 96.6 32 ............T................ CCCGGACAGGACCGTCCACGCCCCTTGCAGGA 7072795 29 100.0 32 ............................. CACATCTACGACGCTGCGAAGGCGTACCTGAG 7072856 29 100.0 32 ............................. ATCGCCATGGGCATCATCGGTATCGGGATGGC CAG [7072872] 7072920 29 100.0 32 ............................. CGCCGGAGGACCACCGTATGAATGAGCACCAG 7072981 29 100.0 32 ............................. GACCACGATCCGGATGACCACCGCCCCGGCCC 7073042 29 96.6 0 ...T......................... | ========== ====== ====== ====== ============================= ================================ ================== 36 29 99.3 32 GTGCTCTCCGCGCGAGCGGAGGTGACCCG # Left flank : CCCACGCATCGTCGCCGACGTCCAGCAGCTCCTCGACCCCGACACCGAGTACGAGGTCCCGGATCCGGAGGAACAACTGGTCGACCTGTGGGACCCGGTGGCCGGAGCGATCCCCGGCGGGGTCAACCACGGAGTGGAGCCGTGACCGCGCCCACGAAGGGACACCGCCCATGTCCTCAATGATCGTCATCTCCGCCACGGCGATCCCCGACCACCTCCGCGGCGCCCTGAGCCGCTGGCTGCTGGAGGTGACACCAGAGCTGTACGTGGGCACGGTCTCAGCCCGCGTCCGAGACGAACTCTGGACATCGGTCGCCGCCTGCGCCGGAGACGGCATGGCCGTCCTCGCCCACCCCGACGACAACGAGCAGGGCTTCACCCTCCGCACGGCCGGCACCCGCCGCCGAGAGCCGATGGACTTCGACGGCTTGACCCTGATCGGCTTCCGCAGAGAGAGTCAAGAAATGGCAAACCGCCTCTGAAAGCGCAGGTCGGGAAGT # Right flank : GGTGGAGCTGGCCCAGCTTGCGGGCCTGTTGGTGCAGTCGGAGGCGGCGCCGCAGCTGCTGGCCGACCGGCTGTAGGAAACTGGCGGCGAGGCTCTGGTCGGCCGTCCGTTTCCGTGGCTGATACGGCGGGGCTTGGTGCAGCGTCAGGCGTGCTCGGACCGCCGGTGTGATGACGGTGTGCGGCTGGACACCGGCGGTGCATGCGACACCTGCGGCAATGTGATCCACTTCCGCCGGGCACGCCGCGCGCAGGCCGCTGCCGAGCTTGCCCAAGAGCTGCCCGGCCTCGGGGACCGCAAGCGGCGCCAGATCCTTGAGAGCCGGCTGCGTGAGCAGGCCGCGATCGAGGCGGAAGACTCCGTGCGGCGGCGGGAACAAGCCCGCGCGGAGCAGGCCCGCCGGGAGGCAGTCCGCGCGGCCGCCCGGGAGCAGGCGGATCGCGAACGCGCGGCCGCGGCCGCTGCCGACGCGGTCCGCCAGGCACTGCCGTGCGAGGACT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //