Array 1 148009-148260 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JADPWJ010000004.1 Staphylococcus aureus strain U1608895_001 NODE_4_length_200158_cov_15.168694, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence          	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	=========================	===============================	==================
    148009	    25	  76.0	    31	...T.A.C.C.T....C........	CATTGTCTGTAGAAATTGGGAATCCAATTTC	T,A [148018,148025]
    148067	    25	 100.0	    31	.........................	CATTGTCTGTAGAAATTAGGAATCCAATTTC	
    148123	    25	 100.0	    30	.........................	CATTGTCTGTAGAATTTCTTTTCGAAATTC 	
    148178	    25	  92.0	    31	...A............C........	CACATTATTGTAAGCTGACTTACCGTCAGCT	A [148193]
    148235	    25	  88.0	     0	...A..............T..A...	|                              	T [148255]
==========	======	======	======	=========================	===============================	==================
         5	    25	  91.2	    31	TCTGTGTTGGGGCCCCGCCAACTTG	                               	       

# Left flank :   CTAAAATCAATGTTTGGTGGATATGATGAATTAATGGAACCTGTGTGTAACACATTTACTGCTAAGGAACCATTTAATCAACTTGGTGGTTATCCATATTTTGACCAAATAGATCCAAGAACGAACGATCAAGGACTGAAAATGTATGATAGAGTCTTACTGCAAATTGATTCTACAAGAGATGGTAATTCTTCGATAATATGGGGTGATTTAGGTATTGCCAATATCTTAGTAAAATCTACTGACCTTGAGGCTATGAAGTTTGATGATTACATGTATTCATGGGATTGCAGCTAAGAGAATCATAAAAATATATTACTTTAATAAGATGTAGTATTTATAGGTCAATCTAGGGAGTGGGACAGAAATGATAAAGAGCCACTAATGATTTATTATGTAGTGGTTCTTACACATTAGCCACAGCTAATGTGTACTTAAAAATAGGAATACATGAGTAAAACTCATGCATAAGAAATACTAATTTCAATAGAAAAAGTATT
# Right flank :  GAAAAATGCTTGTTATAGGTGTATTTTCTTTTGGTTAACTATTGGTAATATATCATTGTAGATTTTAGGATGTTGATTTATGGTTTAGCCTTTGTCTGTTTATGTAAAATGTCCCAGCTAGTCAAACATTGAGTTTGTAATTATTATATTAAGCTAGTTTAAATTTTTTGTGATTTATGTTTTATTCATACCAATTTTGTGAAATGATACAGTGACAGATGTTTATTGATTTTAAAGGGTGATGATGATGGCTATTGTAAATAAAGTGATAATTGTTGAAGGAAAATCTGATAAAAAAAGGGTGCAACAGGTTATTGCAGAACCAGTCAATATTATTTGTACTCATGGAACAATGAGTATAGATAAGTTTGATGATATGATAGAATCACTATATGATAAACAAGTTTTTGTATTAGCCGATTCTGATGACGAAGGAGATCGAATTAGAAATTGGTTTAAACGTTATTTGAGTGAAAGTGAACATATATTTATTGATAAAA

# Questionable array : NO	 Score: 2.61
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TCTGTGTTGGGGCCCCGCCAACTTG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [2,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-2.70,-2.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-7] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [58.3-75.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.78,0.64   Confidence: LOW] 

# Array family : NA
//