Array 1 440532-439892 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRUZ01000002.1 Enterocloster bolteae strain AF24-13 AF24-13.Scaf2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 440531 33 100.0 34 ................................. TTCCATCTCACCCTCGTGATATTCGATGGATTCT 440464 33 100.0 36 ................................. CTTTTCACACCGGCGACGTTGACAAAGGGACCGCTG 440395 33 100.0 33 ................................. TCCCTATCTAATATATAATATATTTAGTGGCAG 440329 33 100.0 33 ................................. ATATAAAGATTGTTATGCGGGGCTACTTTCTGT 440263 33 100.0 34 ................................. CTGCGCTTACAGTCCTCTAAAATGCGCTCCAGTA 440196 33 100.0 34 ................................. CATTTGGTTGGGGCTTATCGTATAGCCATAATAC 440129 33 100.0 35 ................................. ACCGTATCATCATACCACCTTGAAAAGCCTTTTTG 440061 33 100.0 35 ................................. TGACTTTCCGGATCTAACTGACTGGCGGCGTAGGC 439993 33 100.0 36 ................................. CCGTGGAGGGCGGCCGTATAAGTCTGAGCCCAGTCA 439924 33 84.8 0 .........................C..TTCC. | ========== ====== ====== ====== ================================= ==================================== ================== 10 33 98.5 35 GTCTCCGTCCTCGCGGGCGGAGTGGGTTGAAAT # Left flank : TGCTGATACTGATTACATATGATGTGAATACGGAAACCGCTGCAGGCAGGACCAGGCTGAGAAAGGTTGCAAAGCAATGCGTTAATTACGGCACCCGCGTCCAGAATTCTGTATTTGAATGTATTTTGGATAATACCCAGATGATAAAGCTAAAAGCCATACTGACAGATATCATTGATGAGCAGACTGACAGCCTTAGATTTTACAACCTGGGAAATAAACACACTACAAAGGTGGACCATGTTGGGGTGAGTAAAGGGATTAAAGTGGAAGAGCCGCTGATATTCTGACCTGGCTGCGGGCGGTAAGGAGGTTTCAAATAGTTTGGTGCGAACCAGAAGCAAACATGAATTTACGGGGGGATTCGCACCGGAAAAACTGCACAGTGAGAACGGTTTTGGATGTGTGCAGGGCAGGTTGGCGGTGATTTGAGGGAGTATGATGTGATTTGATTGTGGAAATGTGATGAAGAATTGTTGGTTTTTTTGTGTAGTATTGCT # Right flank : TTCCGGTCAGTCCCCGCCCTCACAGCGAAGCAAGCTGAGAATCCGCCAAATTCAGGATTACGTTTAGTCAAAACATCATTCCCCTTTTTCTAAGAAAACAGTATAGTTTGAATCATAAACATTAGTTATAACTAACAACACGCAGCAAAAAAGGTGGGCAAACACCCACCTTTGCCATAAAACTGTTATAGGATATAAAGAACGCGGGCCTCCCTCACCCTTTCCATGCCCGAATCTCTCTAAGCCCCGGCACCAGCACCTTGGCGCTGGTTTCCAGAATAATCCGTCCTTTTTCAGCCGTGGCGCCTGACGGGTCTCCGCCGATTCCTATGGGTTTGCCGTCTGCTGTTTTCCAGTCCTCGGATACCCAGCCAATGGATACGTTTCCATAAGGCCTCAGTGCCTGATTGTCTTTAAATGCAGTCGGAATTCCTGCCTCTGAGGTATCTAACTTTACCAGGGACGGGTCCACGGCCATGACCATGGAGGTTTCCATCTCG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGTCCTCGCGGGCGGAGTGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTCCGTCCTCGCGGGCGGAGTGGGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.70,-6.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 573069-572571 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRUZ01000001.1 Enterocloster bolteae strain AF24-13 AF24-13.Scaf1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 573068 33 100.0 34 ................................. CCGGAGCTATTGCAGATAGTATTTTGGGACGAAT 573001 33 100.0 33 ................................. AATGATGGCGGGATGATGGCCGGGCCGTATGAT 572935 33 100.0 33 ................................. CGTATGCTTATACCCCGCTACTTTATCATTAAT 572869 33 100.0 33 ................................. TGGTACGCCTGGAAGTGGTAAATCGTTGGATAC 572803 33 100.0 33 ................................. ATTATACTCGGCGCTGCAATGCCTGTAAGTACA 572737 33 100.0 33 ................................. ATCTGTAATACTAATTTTATCAGTTTTAGGTGG 572671 33 100.0 35 ................................. CGTTTAATGTGCACCATACTGGAAACAGGGTTAAG 572603 33 87.9 0 ....................AA..C.......G | ========== ====== ====== ====== ================================= =================================== ================== 8 33 98.5 34 GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT # Left flank : AAGTTCTGGAACTACCTGAAAAATGTGGATTTCTGGCAGTGGCCGGAACAGCGGTGGCCCTGAAGGCGGGAAAGCTGGCTGCTGTAATGGAACGTCAGGGCAGAGTACTGCGTATTTGCGATGCCGAAGATATGAAGGAAGTGATGGCGGAATTTGTCCGTGCGTTCAAGCAGGGAGCCATATATCCGGAACAAAAGAGGCTTGTATTGAAAGAGTATCCGGCGGAGGCGGCAGAGGCTTTGCAGCATGCAGGATATATGCGGGAAATGAAGGATTATGTAATATATAAGTAGAGTTGGTTTCTGTGAGTTGGGAGCCCTTCAAACCAGGTGCGAATGCCAAGCTGACATGAAATGCCAGGGAGATTCGCACCTGAAAAACAGAGGAAAAGGCCGTGAAAGCGGGCTGGGTGAATGGACTGAATTGGTTGAACTGGGGAGAAAAGAGCATAATGCATAAAATGTTAGGGGGGATGTGGAGTAGGTTTGGATAATTTTGCT # Right flank : CAGCCATAATTATATATTGAGAATTCGCAAAAGTACAGTTTACAAGGGACTACACAGGGTAGGTATCTGACGGGAGGGGTTCCACCCATCAGATTTTCCATGTGATGTTCAAGCTGTCGCTTGTAGCGGCAACGGTGGTAATCATCAAATCCACCCCCCGCCGCTTGTCGTCAAAGGATACATTCTCCCAAGTATCGAGGTAGCCGGAAATCTGGCTGACCTGTTCCGGGCTGATTGCTTCCACCGTCAACTCGGCTATCTGCTTCACAAGTTCCTGTTTGCGCCCATCCAGTTCCGCTATCTTTACATTCACATAGGAGAGCAGAACATTGTTTGCACCCGTCAGACTGTCCACCAGCTTTTCAATCTCGCTGTCCACATGGGCAAGCTCCACTTGCAGGGCGGCGATTTTCGGGTTTGCCTTTGCCGCTTTTTTTCTGCCCGTCAGCGTTTTGTAGCCTGCCAGCTTCTTCACCATCTGCTGATAAACAACCGCTTCC # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.00,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //