Array 1 30370-35677 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMCR01000016.1 Biostraticola tofi strain DSM 19580 Ga0244679_116, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 30370 28 100.0 32 ............................ GACGTCTGCACACGCGGGAAAAAGGCGCACTG 30430 28 100.0 32 ............................ TTCTCCTGTCTCTTTGAATAACGATTCGAATT 30490 28 100.0 33 ............................ CTTGAGCATTCGGCCATGGTTGGCCAGCTTGCC 30551 28 100.0 32 ............................ TTTTCGCCGTCCTCCAGTTTCTGCAAATCCTT 30611 28 100.0 32 ............................ TGAATTCAACCGGAGGACCAATGACGGCAAGG 30671 28 100.0 32 ............................ CTGTACTGGCAGATATTTCTTTTGCACGGACT 30731 28 100.0 32 ............................ AAACATCGTGGCAATACCCGCTTTACAGATTT 30791 28 100.0 32 ............................ TGGCGCTCCGCCTTGCTGCCCCTCTACCGACA 30851 28 100.0 32 ............................ CTCATCTGCCATATCTAGGCCGGTGAGCTATG 30911 28 100.0 32 ............................ GCCAAGGTGAATACCCAACGCAACGCAAAATA 30971 28 100.0 32 ............................ TTATTTCCAAACAACTTTCTCATATCCATCAG 31031 28 100.0 32 ............................ TATCGAGCTTATCCCCCATGGACAAGGCTATT 31091 28 100.0 32 ............................ AAAGGCCACCGGATGGCGTAACCGGGCGCAGC 31151 28 100.0 32 ............................ ATCAGCGGGCTACCTGAAGCGACAGCGCTACC 31211 28 100.0 32 ............................ AACGGCACATTCTGGCAGGAATGGTTTGGAAC 31271 28 100.0 32 ............................ TATGCCATTGATGCCCCAGCAGGCGCGACCGA 31331 28 100.0 31 ............................ ATCACCCCGGCGCGCTATCGTACAGCCATAG 31390 28 100.0 32 ............................ TGGGAAGAAAGTTCTATCAAGTTCAGTGCCGC 31450 28 100.0 32 ............................ TCCCAGCGGCTGCGGGGCGAGACCGATTAAAC 31510 28 100.0 32 ............................ TACAGCAGCCGACACAGCGAGATTGGCGGCAT 31570 28 100.0 32 ............................ TGGCTTAGAGGGCAATAATACTTTATCCACGC 31630 28 100.0 32 ............................ ACATTATGCGGGCACCGCCGGCCAGGTAATTT 31690 28 100.0 32 ............................ TATAGCAGCATTAACTGCGTACTGAATTCCAA 31750 28 100.0 32 ............................ CATCGGCATGGGTCAACTGGAATTTTGTCTGG 31810 28 100.0 32 ............................ AGGTGAATACGGTTAAAATTAGTCCTCGAGAT 31870 28 100.0 32 ............................ GCGTGCGCTATCGACATGGTCCATGTAGTAAA 31930 28 100.0 32 ............................ GCTAACGGACTGACGACATTTGTCATTGATGA 31990 28 100.0 32 ............................ TAAAATTTATCCCAAAAGTTACATGATAAAAA 32050 28 100.0 32 ............................ GGTCAGTTAAGCCACTTGACCGCTTTCGGCTC 32110 28 100.0 32 ............................ TGGCGAGCAATGACCATACCTTGCCAGCCAAT 32170 28 100.0 32 ............................ TACGCCGGAATGGTATGCGAAGAGATATGGTG 32230 28 100.0 32 ............................ TTCCGAAAGTTCCGGTAAATCGTCAACCTCAT 32290 28 100.0 32 ............................ GTGCGGGCCGACAAGCCCGCTATTTTTAAAAC 32350 28 100.0 32 ............................ CCTCCCTGCCTGCGCTTCCTGTCTTTGCTAAT 32410 28 100.0 32 ............................ TTACCAGATACTAGATTTCTCGTAATGTTACT 32470 28 100.0 32 ............................ TCCAACATTACTCTCGAGGTTGTAAACATGAC 32530 28 100.0 32 ............................ CTTAAATCCCTGGTCACGGAATCCATAAGTGA 32590 28 100.0 32 ............................ CTGGTGGCACTGATGCGATGATTGACTATCGT 32650 28 100.0 32 ............................ ATACATCGATGATCAAGATATTTATCACCAAC 32710 28 100.0 32 ............................ AAACGAGATATCGCAGAAATGGATGGGAGAAC 32770 28 100.0 32 ............................ GATGCGGACAGGCGCTTCAAAAGCTATCTAAT 32830 28 100.0 32 ............................ TGAGCGAGGCCAACCTGAGCGGGGCCGACCTT 32890 28 100.0 32 ............................ ATGTTCAGGACACTGTTACCCGCCTGCCTGAT 32950 28 100.0 32 ............................ TGAAACGAGGGAGTGGCATCCCTCAAAACAGG 33010 28 100.0 32 ............................ ACTGGGCTAATCGCGAGCCAGACGCTCCTAAT 33070 28 100.0 32 ............................ TCAATCAATGATAGTCCTGATAGTCAACGAGG 33130 28 100.0 32 ............................ CGGGGATAACGACTATTGAGCTGGCCGACAGG 33190 28 100.0 32 ............................ CTAAATCGTCCGAGGTAACGACCAGTTGACCG 33250 28 100.0 32 ............................ TTTGCTGATACAGGCCACGAACACCGCCAAAC 33310 28 100.0 32 ............................ GCGATACTTTGCCCCCCAATTGACCAGCATGT 33370 28 100.0 32 ............................ TGCATGAATATGGCCGAATCGGTATTGCTGTT 33430 28 100.0 32 ............................ TCACTGGCCGCAATGATGGAAGCACTCGATAC 33490 28 100.0 32 ............................ CGAAAAAGTAATGCGTTCACTGGTATCGAATA 33550 28 100.0 32 ............................ TGGGATTGATGCACCCCGACGACGTCAGCCAC 33610 28 100.0 32 ............................ TAGTATTGACAGCCCATCCTTAATCGTTGTGA 33670 28 100.0 32 ............................ GTGTTCATCCCATGAGTCAACGCGGATAACTT 33730 28 100.0 32 ............................ ATAACGCCGATGAACCCGATTGCCGTCATAGT 33790 28 100.0 32 ............................ TAGCTTTGGCGTGACAAGCTGAAACTGTATGC 33850 28 100.0 32 ............................ AACAGCTATACCGAAGTACGCAAAGAACATCC 33910 28 100.0 32 ............................ TATAAACTATCATTGCTCGGACATACCGATGA 33970 28 100.0 32 ............................ GAGATGAAAAATCAACCGAAACGACTTTACTT 34030 28 100.0 32 ............................ GTGAAGGAAAACGAAATTCGCGCCATGGGTGA 34090 28 100.0 32 ............................ CTGCGTGATGTGCTGAAGCTGCAAAACCTTCA 34150 28 100.0 32 ............................ TCTGCCTCGATGATTGCCGCTCGCATCGCCAA 34210 28 100.0 32 ............................ GATGAAGCGAAGTTCCCGGGCGTTCCTCAATC 34270 28 100.0 32 ............................ TTCTTCAACTTTTGTTTTTCACATTGGGCAGC 34330 28 100.0 32 ............................ ATTAATTTTCGTGACAACGGCGATGGCTCAAA 34390 28 100.0 32 ............................ AGGTAGAGGGAGCCGCCGACGCTGAGGTTATC 34450 28 100.0 32 ............................ ATCCTTAGCGAGCTGCTCAAACTCAACGACCC 34510 28 100.0 32 ............................ TTCCGCATTGGCGCAATTCAGGGCCATGTTGA 34570 28 100.0 32 ............................ AAGGTAGGCGAGAACTATGGTGATGCTTCCCC 34630 28 100.0 32 ............................ TACGGATGGAATAAAAAACAGGACAGGGTGAC 34690 28 100.0 32 ............................ GTAATTGTTGCCGACAAACTGAACGCTCTGAG 34750 28 100.0 32 ............................ TCTTGGTGCGAGGGTCCATCACTTTGATATCA 34810 28 100.0 32 ............................ CTCAATCCGGCAAGCAAGCTGGCTTATCTGGT 34870 28 100.0 32 ............................ ATCATCAATAATCCGACGATAATCCTCCAGGT 34930 28 100.0 32 ............................ AAGGACGCTGAGTGGGAGAACGGCAAATGGAC 34990 28 100.0 32 ............................ TCGTTAAATCTGACGCTCAAACAATCACAGAC 35050 28 100.0 32 ............................ AAGTGTTTTTCTAAATCGGTTGTAGTCATTAC 35110 28 100.0 32 ............................ TTACATCAGTGACACGGTCATTCTCAGACATG 35170 28 100.0 32 ............................ TCGACATGCTCAGGTATTACATCCCACTGATA 35230 28 100.0 32 ............................ TAGCAACTGTCATCGCGCCAGACTACGGGATT 35290 28 100.0 32 ............................ ATACGCAGTCGGTAGCGGAGGGGAATTTGCAA 35350 28 100.0 32 ............................ GGAACGCCGGCCGAAGGTATTGGCATATTTGT 35410 28 96.4 32 ......C..................... TGCCGGCGCAGACCAGCCCAGAAGTAAAACAG 35470 28 100.0 32 ............................ TCAATGCGCTGAATGAGCTCTCGGCCGTTATT 35530 28 100.0 32 ............................ TTAAGGACACAGGAAAAGCAGAAAGAGACTGG 35590 28 100.0 32 ............................ CACTGCGCAAATGCCCGCTTCTCTCTCGGCTT 35650 28 96.4 0 ........................A... | ========== ====== ====== ====== ============================ ================================= ================== 89 28 99.9 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : GCATTGCTGCTTGTGTTACAGATGTTCCGGTACCGAGCATGACTACGCTCGTATTAGCGATAGGAATATTCCAATACAGGGACTGATTCCCTTGATCAGTGACGTACTCTACCCTGCCGCCATTGACCAAAATACGGCAGTGCTGAAGATAATAAATATTGGCTCGTTTAGAATGCAGAATCGTTTTCAAATCTGAAGGGCTAAATGATTTATCCATTAAATTTTCCCTTTTTAGTCAGATAGCGAGGACAACGTAGGCTAAAGACTCACGATGCAATAATTACATTTCGTCGCTAACGATCGATGAAGTCAGACTATCACAGCATTCTGGCAAAGTTGATTGTCAAAAAAAATATTCATGATACAACCCCCCTTTTTTATCATCCCTTTCATCGCGCACTAATAATCAATAGGTTACATAAGGGTTCAAAAAAAGGGTCTAACGAGTCAATTTGGCAATTGCAGCTTATAAAACATATCGTTAAAGTGATTGTGTTTCG # Right flank : AAGGTTAGGGAACGGCGGCCTGCGCACGAGCTATTCGTGCATAGATATTCCGCTATCTTCCGGCGTTCCGGCATGGCGTCGGTCACCCTGGAGCATAACAATCCTGTGCCAATCATTAATGTTGTAATTTAACCAGTCTGGTATGACGATGGTGTAGGGATAACGCTGGCTCTAACCAGACGTTCGGCTCGTCATTTCCATCCATCAACCTGAGTACGGTGATTCGATATATTGGGCCGCTCTGTGGTGCCAATCGCTATCATTAACGCGATGCGAGCATGCGTATATTTGAATATTTCCGTAATATTATCTACGCCACCATACTCTATTGCTCTGGCACCAATACGTCCCTGACCATTATAACCGGGCGTAAAATGACGACATCAATATCTTTCGAATATCAGTCAAGCTAACGCGCAGTGAAGCATTGTGTAATGGTCAACTAAAACCGGACACGGATTTAGGCACATTGTTGTAATCGGCGTTCATATTCATCCGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //