Array 1 7498-7136 **** Predicted by CRISPRDetect 2.4 *** >NZ_NETX01000318.1 Streptomyces sp. SM14 2810_9683_2674658_809+...2022-, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 7497 30 100.0 37 .............................. ATGTGGGCGACCCGGCACGAGGAGGACTTCCCGCAGG 7430 30 100.0 36 .............................. GTGACCAGCAGCAGCCAAGACCTGTCAGCCGCGGAG 7364 30 100.0 36 .............................. AGGACGACATCGCCGCCCTGCAGTGCGTCGCCCGCC 7298 30 100.0 38 .............................. CCCGAGCGGGCCGAGATGCTGGTGACGATCCGCCAGGC 7230 30 100.0 35 .............................. CGGATTCGTCGCAAGCGACCCGTCGTGTATCACGC 7165 30 90.0 0 .C............C........C...... | ========== ====== ====== ====== ============================== ====================================== ================== 6 30 98.3 37 GTCCTCATCGCCCCTCAGAGGGGTAGCAAC # Left flank : CCATGCCCCGCATGGTGGGGCCCTGTCCCCGCCGTCACGTCGGCCACCGGAGGACGGAGGCGGCGTTCGGCTCGGGAAGCACTGTCACCCGTCGGATCCACGCGCCACAGACCGAGTCGCTCGCCCAGGCCGCGATCTACCAGTCACGAAAGGCCTTCCCGCGACCGAGACGCCCCCGACGGTTCAGATCCTCGTACAGCGACAACGACGGGCAGTGCGTCGAGGTCGCCGCCAACCTCGTCGCATCGCACGGCGTGGTCCCAGTCCGCGACTCCAACAACCAGGCCGCTCCGACCCTGATACTTCCGGCCGGGGCGTTCTCCTCGTTCGTGGCAAGCATGAGAGCAGGGGCCTGCACCGAAAGCGCTCCTCTCGCCTGACACCCACCGTGCCCGGATTTCAGCAACACTCCCGGGTTTTCCGCACTACCGGAGGTCCGCTGAAAACCGCCGCCCTCACTCAGCCCCAGCACCCCCGACGACCTGCACCTTCACAGTGGG # Right flank : AGAGGCGGAGCCTAACGCTCTGCATTGCTGATGGTCCTGACGCAGAAGCGGGGCCGACCGGTCTCGCGCAGCGAACACCCTTCGAGACACCATCCAGCGCCTGCCGATCCGCGAGTACCGTCGAAGAACTCGTCGAACTCGGGAGACACGATATGAGTCCTTCGCGTCGATCCGTCCTGGGCGCCAGCCTTTGCTCCGTGGCGCTGACCGTGCCGGGCTGGCCGGACGTGGTCGGACGCATGGAGGCCGTGAGCACGGGGGCGGACATCAGGATCGGCCGTGCGGACGTGGCGACGGTGTCGGCCATGACGGAGAGGCTGTCCGCGCTGGACGACGAGTTCGGCGGGCGGCACGCACGCCCCATGGCAGCGGCGTTCCTGGTGAACACGGTCGCGCCCTACCTTCGGGCCGACGCACACGAGCACGTCCGAAAAGACATGATGGGGGCAGCCGCATTCCTCTACTACCTGACCGGGTGGATGGCGGTTGACGAAGGTCTT # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTCAGAGGGGTAGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 1 3505-3110 **** Predicted by CRISPRDetect 2.4 *** >NZ_NETX01000339.1 Streptomyces sp. SM14 2832_8540_1802158_967-...1249+, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3504 29 100.0 32 ............................. GAGGAGGACGGCGCGGCCGTCGACGGGGCGTA 3443 29 100.0 32 ............................. CCCCTTGCTGGAACTATGAAGACGTCCTATCG 3382 29 100.0 32 ............................. GTGACGAGTCACCGAGCAGCGCGAGCATTTCC 3321 29 96.6 32 ............................A GTACGAGGGCTACTGATGGCACCCGCCGCCGA 3260 29 100.0 32 ............................. GGGGGACGTCCTACTGACGTCAGTAGGACGTC 3199 29 89.7 32 ...............T.A....C...... GCCAGAAACTACGCCCCCGCGTGCCTGGCCGA 3138 29 69.0 0 ......G.....TG...C.T.CCTC.... | ========== ====== ====== ====== ============================= ================================ ================== 7 29 93.6 32 GTCTTCCCCGCGCACGCGGGGGTGTTCCC # Left flank : ACCCCGAACGGCCCGGCCCTCGCCTTCCCAGCCGCCGACTGGTCGTACTTCGTCACCGCCCTCAAGCACGGACACCTGACGAACTGAGCACCACCGCAGCCGGGGCTCCGCCGAACCACCACCGAGCGGAGCCCCGGCGCGGGCGACACGTCGCACATTGAGCATCCCGACAGCTACTCCACACACGCGAGGAGCCAAGGCCATGCCCACACCCACCCACCCCACCTGGCGCAAGTCCACCCACAGCGGCCCGGACAACGGTTCCTGCCTCGAAGTCGCAGACGACTCCCCCGCCAGCACACTTCTCCGCGACTCCAAGGCCCCGAACGGCCCGACCCTCGCCTTCCCAGCCGCCGACTGGTCGTCCTTCGTCACCGCCCTCAAGCGGGGCACCCTGACACGCTGAGCATCAGCCCACACCAGCGAGGCCCGAAATGCCGGAGTTTGGCAAAGTAAGTAAAATCCACACCCGCCGCGCCTAACGCCGCAGCTCGCGACCT # Right flank : CCGCTTGCAGCAAGCCGTCCGCGACGAGTGCTCCGGGCCACCTACGATTTTAGTAGGTGGCCGCGAACCTACCTCCGTGGCGGGCAAAGGGAGTTCTCGGGCTCGCATCCCCCCAGGCGAGGTGCCCCCTCGTCTTCTCGCCGCACGCGTTCGGTTCACTCCAGGGCGCGGCGCTCGTTTTCGCCTCCCCCGATTGAGGGTCCGCTGTCACACACCGCGTCACCTGGTCAGCCCAATCGGCGCTCCGACACTGCCCGCAATGCCGGTGAGGTCCCGTAGCCTGCCCAGGGCCAGACGCCAGCCCGCTTTCTCCCCGCGCAGGCGGGTGTACTTCGCCGTGGGTTGCCCTACGGTTGCCCGCGTATGGACCCATACGCGGTTTGCATCTTCCCCGCGCATGCGGGGGCGTTCCCACGCGGACGTCGCCCGACATCGCGCCGAGCGCATCTCCCGCGCGCACTCGGTCCTCCATCGGCGATAACACCGGCTTGGAGTCTTCC # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCGCGCACGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 15065-16619 **** Predicted by CRISPRDetect 2.4 *** >NZ_NETX01000355.1 Streptomyces sp. SM14 2852_22288_3060071_1073-...339+, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 15065 29 100.0 32 ............................. AGGCACGCGAGGGGCGGTCAGCTTGATTGCTT 15126 29 100.0 32 ............................. GCCAACACCTTCCGCGCGCTGTACAAGTACGC 15187 29 100.0 32 ............................. TTGCGGCCCTCATTACCCTCGCCCTCACTGCG 15248 29 100.0 32 ............................. CTGCTGTCGAACGTGGAGACAGTTAGTGGCAG 15309 29 100.0 32 ............................. GGCGCCCGGAACTCCTGCAGTCGGCTCGCCAG 15370 29 100.0 32 ............................. CCGTGGCGGTTCGGCCAGCAACTCGCCCAGGC 15431 29 100.0 32 ............................. GCGGGGAACGAGTTGCGGGCGCCGCTGCCGCT 15492 29 100.0 32 ............................. TTCGTGATCGCCGCTTCTGCCGTTGTGGCCGG 15553 29 100.0 32 ............................. GCACAGCGTGGGGTCAGCCAGTCGGCCGTCCT 15614 29 100.0 32 ............................. AGATCTGCAGAGGGACGCCACGACAGCGAGGT 15675 29 100.0 32 ............................. CGGGGGGCCAGGAAGTTCGCCGCGCTCAACGC 15736 29 96.6 32 ............................T GGTGTTCTTAGGGGGGCGATTCTCCACCGGTG 15797 29 100.0 32 ............................. GGGGGGCGCTCTGTCGAGGGGCGCCCCCGCAC 15858 29 100.0 32 ............................. GCACCGACCTCCATCACCCTGGACTGGGATGC 15919 29 100.0 32 ............................. GGGGTGCCGCTGGCCGAGCCGGGCGGGCAGCG 15980 29 100.0 32 ............................. GGAGATCGGGAGCACCGAGGGCTTCCTCCGCT 16041 29 96.6 32 ............................T CAGCCTGGTTCGGAGACCTCAGCGGCCCCGGG G [16063] 16103 29 93.1 32 ......................A.....G CCGGGCGGGACGCCGGCCGCGGCGCCTTCCGG 16164 29 100.0 32 ............................. AGGTGGCCCACGCGCAGATGAGGTACGTGCCG 16225 29 100.0 32 ............................. AGCCCGGCGAAGGCCAGGAGGTCGACGGACCT 16286 29 100.0 32 ............................. GTCGCGGTGACGGTCCACGCCATGCCGGTCTT 16347 29 100.0 32 ............................. CATCGAGCGCAACGTGCTCGACCCGCTCCAAG 16408 29 100.0 32 ............................. GGCACGATCATGCCGTGGACGGCACTGAGCGA 16469 29 100.0 32 ............................. GGCACCGACTGGGCCACCCACACCATGGACTT 16530 29 100.0 32 ............................. GTACCGGCCGCGCGGGTCACGGCCCGGGGCTG 16591 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 26 29 99.5 32 CTCCTCCCCGCGCACGCGGGGGTGTTCCC # Left flank : GTCCGTGACACCTGCCCCGCACCTCGCCGGGGCGCCACTGCACCTGCTGCGCCGCCGCCTCCACCAGGCCGCCGCCGGAGGACGCGCGCTACTGACCCCGCCCCCCGGCAACGACCCCCGCACCCTGCGCGACCACGCCCTGCCCACAGCCGCCGCCCTCCTGGACAACCTCCACCGCACCGCCGCCGACCGCACCCGGGACACCTTCGGCCGCCTCCGCGCCACCGACCCCGAACGCTTCGCCCGCGCCTGGCTGGCCACCGCGCTCTACACCGACGAACTCGACCACGCACTGTGCGCCGCCGCCTGGAGCGCCGGACCGCCCGTGCCCGCGCCGCGATGACGAACGACCGCCTGCGGCTTGGCAGTCGAGCCGCTGTCATGAGGAATACTGGAAGTGGTGAGGCAGGCGTCTCACCGCCAGGACGGGTGAAATGTCGGAGTTTTGTAAAGTGAGTAAAATCCAGCTACTCGCCAGCTAAACCCCCAGCTCACGCCCT # Right flank : CCGATCACTGCCTGCGCTTACGGGCAGCACATCCCAGGACAGGGGGCGCGATGACGCGCGACCGGGCACGACTCTGGCTCATGAGTACCGACGACCAGGGAGCAGCCAGCGGCTACCTCCACGAGCTTGCGGCAGCGCTCCGCCAGGTTGGGCTGACGAAGCGCTACGGCGTCACGATGACGACATGCGCGGTGGGCGGCTGGGTCGTGTACCTCGTGGACCGGCAGTACGGGTGCCCGCCACCGCCGACAGTGTGCCGCCCCCGCCGTCGGCGGTGCGGATCGCCGAGCTTGTTTCTCTGGAACGATCGGGGCTGACCGCACCGAGAAGCCCCACCGTGCGCAACATGCACGGTGGGGCTTCGGTCGGCTTCGCGGCGCGCGCTCAGCCGGTGAACTCCCCGGCCTTGACGCCGGACACGAACGCGGCGAACGCTCCGGCCGGGACCGCAAGGGCCGGACCGGCCGGGTCCTTGGAGTCGCGGACGGGGACCGTGCCGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCCTCCCCGCGCACGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 13529-17537 **** Predicted by CRISPRDetect 2.4 *** >NZ_NETX01000364.1 Streptomyces sp. SM14 2863_18041_3453743_1173+...800+, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =========================================== ================== 13529 29 100.0 32 ............................. GCCGACCCGGAGCCGGAGCCGACCCCGGAGCC 13590 29 100.0 32 ............................. ATCCTGTCGACCTCGACCACCGAGGGCGCAAG 13651 29 100.0 32 ............................. AACAAGGGCGGGGCCAAGAAGACCACGCTGAC 13712 29 100.0 32 ............................. TGGCCGGGCTGGAGCCCGTCGGTGAGCGAGTC 13773 29 100.0 32 ............................. ACCCTCACCGCCCCCATGGAGGACCCCACCGT 13834 29 100.0 32 ............................. GCGCTGGCCGGCACCCACGCCGCAGCCGTGGA 13895 29 100.0 32 ............................. TGCTGTTGGCCTGACGCCCCCGGCCACCCCAC 13956 29 100.0 32 ............................. GCGCAGGCGTGCCGGGCGATGGCCGACGCGAT 14017 29 100.0 32 ............................. GGCTACCAGGTCGGCCGCACCGGCCAGATCGC 14078 29 100.0 32 ............................. ACCTGGATCACGGAGCTGCCCGTCCAGGTGAT 14139 29 100.0 32 ............................. GCCAGCGCCTTGAGGTGCGCGGACTTCCCGGC 14200 29 100.0 32 ............................. TGGACCCCAAGCCGGTCATCGACCTGGAGCCG 14261 29 100.0 32 ............................. TCGGTGTCGCGCCGCATGTAGGGCAGGTGCTC 14322 29 100.0 32 ............................. GCGGCGGCCCGGGGTGCGGCTTGGGCCCTCCA 14383 29 100.0 43 ............................. GCGGCGGCCGTCTCCAGCCCGGCCCCGGCGAGAGCCGGGACGC 14455 29 96.6 33 ............................A CAGGACTCCGATCTGGTGAGGGAATGGATTACC 14517 29 100.0 32 ............................. GCCCTGTGGGAGGCGGTGACCGGCAAGCCGGG 14578 29 100.0 32 ............................. CCGTGGAGGAATCACTGTGGAACCCATGATGA 14639 29 100.0 32 ............................. GCCACGTGCATGGCGGCAGCGGCGGCGTCCTG 14700 29 100.0 33 ............................. CGCGGGCGTGGTGGGGAATCGAAGACCTCGCGG 14762 29 100.0 32 ............................. TCCGTGACCCACGCGGCGAACTGGGCGGCGGC 14823 29 100.0 32 ............................. GTGCCGCCCCGGCCCCGTCCGCGCGGGTCGAA 14884 29 100.0 32 ............................. TTCCCCCCACGACCGGGGTAGAGGCGATGCAC 14945 29 100.0 32 ............................. TTGGACAAGGTCGCCGTCCTCGGCGGCCGGGC 15006 29 100.0 32 ............................. TCGCGCGCCGCCCACCTATACGACCCCCGGAT 15067 29 100.0 32 ............................. GTTCGGCGCGGTGTGGGCGGTGCTCTCCGTCG 15128 29 100.0 32 ............................. TCCGCGCCACCTGGACCCAGATCGCCGCCGCC 15189 29 100.0 32 ............................. AGCGTTCGGGAGCGGGCGTCGGCCAGCTCTCG 15250 29 100.0 32 ............................. CCCCTTCTGACCTTCCTGACCGGAGAACAGCT 15311 29 100.0 32 ............................. TGGTCGCCCCGGCGGACGCCAGGTCTCTCGGC 15372 29 100.0 32 ............................. ATCGCTGTCACCGCCCTCCGCGAGCACGGCGT 15433 29 96.6 32 .......................A..... TCGGCCGCCACCGCGGCGGCAGCCTCATCGGC 15494 29 100.0 32 ............................. GTGAACGTCGCCTCGGCACCAGACGTCTTCAA 15555 29 100.0 32 ............................. CGCGTCAGCAGCTCGTCGGCGTTCTCGTAGGA 15616 29 100.0 34 ............................. CTCGTAGGGCGGAGACGGACCGACCGGTCAAGCG 15679 29 100.0 32 ............................. GAGGCTCAGATGACCAGATCGACGAAGTACGA 15740 29 100.0 32 ............................. CCCGACCTCGAACTGGTCGGCGCCATCCCCTG 15801 29 100.0 32 ............................. AGTCGGTATCAATCCGAAAAGGACATGGTCCT 15862 29 100.0 31 ............................. CCCGGCCAGCCCCGCCCCGGTACTCGCAGGA 15922 29 100.0 32 ............................. AGGAGTCACCCCATGACACAGGCCACTCAGCT 15983 29 100.0 32 ............................. GCAGATCCTCGACCTCGCCGGGATCTACCCGG 16044 29 100.0 32 ............................. CGGCGGCCCGCCTGGCGAGGGGCGGGCCGCGC 16105 29 100.0 32 ............................. AGGGTGCGCGTGCTGCACTGCGATCTCGGGAA 16166 29 100.0 32 ............................. GAATCCGAGGGCCGTTTCGATGTCGACGCCAT 16227 29 100.0 32 ............................. GCCGACAGGGGGCGCGCGCTGTGGGACCTGGC 16288 29 100.0 32 ............................. AACTCCCTGATCTGGTCGCGGGTGCGGGGGAT 16349 29 100.0 32 ............................. TGCTGGACGGCGTAGTCGGCCACGCCGTCCAG 16410 29 100.0 32 ............................. GGAGGCCGCCCCGGCGCCGTCGTCCTCGGGAC 16471 29 100.0 32 ............................. GGGCGACGAGGACGCCGACCGCGTCGAGCTGC 16532 29 100.0 32 ............................. AGTGCGGCGGCCGTGGCGAGTTCTTCGGGACG 16593 29 100.0 32 ............................. CGCACACGCGGGTCGGGGGCGGCCACGGCCGC 16654 29 100.0 32 ............................. GGGGACCTCCGAGAAGGAGCGGGTGGCGTAGA 16715 29 100.0 32 ............................. GGGCTGATGACGGACATGCAGGCTCGCGGCAC 16776 29 100.0 32 ............................. GTTGGACAGCCACTGGCCAACGGACCGCTCCA 16837 29 100.0 32 ............................. TGGCCGCGACGCACGGGGTGTCGCCGGGCACG 16898 29 100.0 32 ............................. TGCTGCCCGAGCGTCTTCCTCGGGGAGCTTCG 16959 29 100.0 32 ............................. GCCGCGAGCGGGATGCCCGTGAGCACGAGGCA 17020 29 100.0 32 ............................. CTGGCGACCCGCCGGCTCGTCCCGCTCAACCC 17081 29 100.0 32 ............................. CTTGGCATAGCTATGCCAAGGTTGCGGCGAGT 17142 29 100.0 32 ............................. TTGGCGCTGTCGTGGACGACGCCGAGGTTGAC 17203 29 100.0 32 ............................. ATGCCCTTCTGGATGGCCCACTCCAGAGGCCA 17264 29 100.0 32 ............................. TCGCCATCTACATCGGCGCTCTCACCCAAACC 17325 29 100.0 32 ............................. AGCACCGCCCGCGCCGCCGCGCAGAGGGTCTA 17386 29 100.0 32 ............................. CCTGGGAATTCGGTCTGAATTATGGGAAAAAT 17447 29 100.0 32 ............................. GCCGCCGCCAACGGTGTTTGCCCTGTTCAGTC 17508 29 89.7 0 .........................GAG. | G [17525] ========== ====== ====== ====== ============================= =========================================== ================== 66 29 99.7 32 CTCCTCCCCGCGCACGCGGGGGTGTTCCC # Left flank : ATGGGACAGCAGCAACACCGCCGCCAGAAAGCCGACCATCGGCGCCAACCGCTGCGTCTCCGCCCACGCCTCGGTCGGTGAGACCGCACCGACCAGCATCAGCAGCCCGGCGGCCGGAACCGCCGCCGCGGCCTCCGGCCAACGCCGCGGCCGAATGATCACAAACGCGAGCACCGACAGCAGCACAGCGACGGACAGCACTTCGGCGGCGACATCGGACACGTGACGGGCTCCGGGGACACGGACGGACAGGAACGGCGGACACGCCGCACACCGCGCGGCGCGGCCACGCGACCGCCAGCATCCCACCCCCACCCCGCCCCACCACCGCGCCGGGCCGTCACACCGGCCCCCTACACCCCGACGTGGCCCACCCGCCGCCGCCGAGCGGTAACCTCATGACCCCGGACCCTGCACCACCGACAAGGACCGATATGCCGGAGTTTGGCAAAGTAAGTAAAATCCGCCACCCCCGCACCTAACGCCGCAGCTCACGACCT # Right flank : CTGCACTGATCTTCGTGGAGTCCCTGAAGCCTGGGTTACGCTTCCAGGCGTAAGGAGAACCACGAGCTGTGCCAGCACCACGTAAGTACCCCGATGAACTCCGTGAGCGCGCGATCCGCGAGGTCCGCTCGACCGGACGCCCGATCGCGCACGTTGCCCGCGATCTCGGCATCCACAAGGAGGCACTGCGCGGCTGGGTCCGCCAGGCCGAGGCGGACGCCGGTGAACGCGACGACCGGCTGACGACTACCGAGCGCGACGAGTTGAAGGAACTCCGCAAGGAGAACGCCGAGTTGAGGCGGGCCAACGAGATCCTGAAGGCCGCCTCGGTGTTTTTTGCCCAGGAGATCGACCGTCCCCGGACGAGGCCGAGCAGGTGATCGACCACCTGCGCGACAAGGTTCTTCGTCGCGGAGCCGGCGGGCCGACTTCGGCCGCGTCCTGCGCGCGAAGTACGTCGACGGCGACAGCTCCAGCACCCGACAGACGGGATCGACCCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCCTCCCCGCGCACGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 14058-15064 **** Predicted by CRISPRDetect 2.4 *** >NZ_NETX01000405.1 Streptomyces sp. SM14 2915_32677_4372220_1784-...820+, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 14058 29 100.0 32 ............................. ACCGTCGCCCCGCCGGAGATGGAACTCCTCAA 14119 29 100.0 32 ............................. CATGGCCGTGGTCGCGATCATCCTGGCGATGA 14180 29 100.0 32 ............................. CCCCGGCAAGCGCGCCCGGGTCTACTGCGGCG 14241 29 100.0 32 ............................. GTCACGGTCGTCCATGAGGTGGAGCCGGGCCG 14302 29 100.0 32 ............................. ACGGCCGGGTCCGCGCTCAAATCGGACTGGGT 14363 29 100.0 32 ............................. GGGGAATTGCTACTCCCGCTCCCCCCGCCATG 14424 29 100.0 32 ............................. GGACGGCGTGCGGAGCGCGGCGACCAGGGCCG 14485 29 100.0 33 ............................. ACGCTCATGGCTTCACCAGCCAATCGGTATCCG 14547 29 100.0 32 ............................. TCGGGGAACGAGTTGCGGGCGCCGCTGCCGCT 14608 29 100.0 32 ............................. GCCTACCGCGCGCTGCTGCGGATCAGCAAGGA 14669 29 100.0 32 ............................. CGGTCACCCGCGCCCACAGCTGGGTCAGGGTC 14730 29 100.0 32 ............................. TACGCGCTCATGGAATCCATACGACCCGGCCG 14791 29 100.0 32 ............................. CAGGCACGGCCGTACTCCGTGGCGGACAGGCC 14852 29 100.0 32 ............................. AGGTAGGCGCCGCGGCGACCGAGCCGCCGCCG 14913 29 100.0 32 ............................. GCGAGCGACCACAAGAGCGGCGGCAGCATGGC 14974 29 96.6 32 ...........................T. GTCCCATACGTCGCGGCCTGCTCATCGCTCAG 15035 29 86.2 0 .G..........TG......T........ | T [15059] ========== ====== ====== ====== ============================= ================================= ================== 17 29 99.0 32 CTCTTCCCCGCGCACGCGGGGGTGTTCCC # Left flank : TGCTCCACCCCCAGCTGCCGCCCGCCCGCCGTGTCCAGTACCGGCGGCACCTCCCGGTCGGCGCCACGCTGCTGCTGTACACCGACGGACTGGTGGAGCGGCGCGCCGGCGCCGACATGGACGCCTGCACGGAACTGGCGGGCGCCCTGCTGGCGGCCGGCGTCAGTGACGGCCGCCCGCTGGACGTGCTGCTCCAGGACATCGTGGACGGCGTGGCCGGGCCGTCCCCGACGGACGACGTCGCCCTCCTCGCCCTCCGCGTCACCGCCGGCTCCGACTGCTCCGACGGGTCCGACGGCTGAGCGGCGGGGACGCCCGGCACCACCGTGTCCGAGGTGCGATGGTGCACGCCTTGCGTGAACTGCACAGCCCGCCGGTCGTGGTGAGGAATACTGGAAGTGGTGAGGCGGTGTCTAACCGACGGGATGGGTGAAATGTCGGAGTTTTGTAAAGTAAGTAAAATCCAGTTACTCGTCAGTTAAGACTCCAGGTCACGACCT # Right flank : CCGGCTGTCGCGTCGTCCCACCTGCCTTCTCGTCGCGTGTGGGTCTACGTCCGGGGCCGGGGTGGTGTGGGGCGGGTGATGGTGAGGTGGGTGGTGGGTTTGAGGGTGAGGCGGGTGTCGGTGTCGAGTTCGAGGCGGGTGAGGCCGCCTCGGTGTTCGGCGAAGGTGACGCGGGTGGTGGCGCCGCCGAGGGTGAGGTAGTCGCCGATGCGGATGTGGTCGGCGGGGAGGCGGAGGGCGTGGGCGCGGAGGTGGGTCATGGCCGGCGGGTCACCGACTTGGCGGCCGGGTGCTGCCGCAGGGCGTTGTTGAGGGTGGTGATGTCGTCGTGGGTGAGGTTGCCGAGGTGGACGAGGTAGGCGGGGCGGCGGCAGCCGTCGCAGGGGTCGAGGACGTCGATGTCGTCCAGCCGGACCCCGAGGTCTTTGATGTGGTTGAACAACTCCCTGGCTGCGTCTTCGAGTTCTTCGCGGTCGGAGTTGGCGAAGCTGATGTCTTCG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCCCCGCGCACGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 21709-21254 **** Predicted by CRISPRDetect 2.4 *** >NZ_NETX01000449.1 Streptomyces sp. SM14 2966_37721_6708333_2301-144+2399+, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 21708 29 96.6 32 ............................G TGAGAACGGGAGGGTTGGCGGTTTGCGACCAG 21647 29 100.0 32 ............................. GACAGCGGCAACTCGCCGGCTTCTTCGGCATC 21586 29 100.0 32 ............................. CAGCCCTACTACTACGTCGCTGAATACAACTG 21525 29 100.0 32 ............................. GAGGCCGGCCTCACCCGTGACGCCTTCGACTG 21464 29 100.0 32 ............................. GACGGTGGGCCCGGCAACCGCCGGGCCCACCG 21403 29 100.0 32 ............................. TGCCCTGGCCGCGCCTGCGCCCCGAAGCGGAG 21342 29 100.0 32 ............................. AGCTCGCTCGGCTCCACCTTCAATACCGTCCT 21281 28 79.3 0 .....................-..GGGTG | ========== ====== ====== ====== ============================= ================================ ================== 8 29 97.0 32 CTCCTCCCCGCGCACGCGGGGGTGTTCCC # Left flank : CAGCGCCTCGGCGATCAGCTCCCGAAGGTTCCTCGGCAGCCACTCGTCCCACAACCGCCCCGCCACGGCACCGCTGTCGGCCATGTGCCGCCACAGCGGCAGCCAGGCGTCATCACTCCGGTCATGCTTCGCCCATACCGACCGCGCAGCCGGGGACAACCGCCCCAACGGTGTCTCCCCCGACTCGACAGATGACCGGTGAGCGCCCGATGACACAGACACACTTCACCCCTCGTTGAGAATGCTCAGAACGTGGGGGGTGACGCACAGTGTGCACGATCAGGCTGGGCACGGGAACGAAAACCGGGCAGTTGCGGAATATCCAGATCTGACCGAGGTCGACGTGATAATGGAACGAGCACAGCACCCCGAGTGACATCCACCCGGCCGCGACGCTACGGTGAGCAGATGACGGAGAGGGCGAGGCGTCCGAAATGCCGGAGTTTTGTAAAGTAAGTAAAATCCAGCACCGGCCAACCTAAACCCCCAGCTCACCACCT # Right flank : TGTTTCAGGACGCCCAGCCAGCAGGTCGGCGGTGGGCTCCTTGCTCTGCTGAGGCCCGGGTTTCTCCGACTACGTGGGTGGGCCGGAACTGTGCTCAGTGGGCCGCCAGTTGTCTATTCTCTCGACAGAGTGAGAGCTGGACTGACAGGCTGAGCCCATGACTTACGGAATTGAGCTCCGCTTCGCCCGATGAGCGCACAGAACGAGCACGATGCGCTCAGTCATCCGCCCGCCCTGTACGACCACGCTCTGCACCTGCTTCGCCAGTCCTCCGGCGGGATCCCGCCTCGGCGTGGCTTCTCTCTCACGCGGGGGCGGGAATCGCGCGAGGCTCCGCTGTCCCGCGCAAAGGCGCACAGCGCCGTACGGGAAGCGCTGAACCCTCTGCCGGACGACTCCGCGACACTGCACGACCGTCTCGCCGGGCTCGGCCTGGGCGATAGCCATGTGCACGTGATTCGGTCTGCCGTCGCCGACCTCCCGCTGCCAGACGATCAGCG # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCCTCCCCGCGCACGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 2518-2096 **** Predicted by CRISPRDetect 2.4 *** >NZ_NETX01000454.1 Streptomyces sp. SM14 2970_25532_7917618_2399-...1823-, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2517 30 100.0 35 .............................. ACATGGCCGCCGGGGAGCGCCCACTTGCCCTTGTG 2452 30 100.0 34 .............................. ATGTCGCGGGGCTCGATACCCCGCTGGGGGTGGG 2388 30 100.0 38 .............................. GCATACGAGAAGGTGGCCGCCTCGCTCAAGGGCCTCGC 2320 30 100.0 35 .............................. CTGAGCAGGCGCAGCCGCTCGGGGTCGACCCGGGT 2255 30 100.0 34 .............................. CTTGCCCTTCCGCGCGGTGGTCTGGTGGGTGGGG 2191 30 100.0 36 .............................. AGGCGTCCGGCGTATGCCTCTCCGGCGGCGTCGTGG 2125 30 73.3 0 ......................CGGCATTT | ========== ====== ====== ====== ============================== ====================================== ================== 7 30 96.2 36 GTCCTCATCGCCCCTTCGAGGGGTAGCAAC # Left flank : CGGCATGGGCACCGAGATCTGCCGACCCGGCTTCCGTGGCTGCCCGTTCATCAACGCCGCAGCCGAGTACGCCGACCCCGACCAGCCCGTCCGCCGGCTCGTCGCCACCCACCGGGAATGGTTCATCGGCCAACTCCGCGAACTCCTCACGGCCGCCGGGATCGCCCACCCCGAACCGGCCGCACAGGAACTGATGATGCTGCGCGACGGCGCCGCCATCGCCGGCTACCTCGGCGACCCCACCACCGTCGCCAACGCCCTCGAACGCGCCGCCCTCGCCATCATCACCGCACACCGCTGACCCGCCCACCGGCCCGCCACTACGCTGACGGCCGACACGAACCACCCGATCCGCCCACCGGGCAGGCCGATCCGCCGTAGCCTGGAACACCGGAATTTCAGCAACTCTCCGGGGTTTCCCGCACTACCGGAGGTCCGCTGAAAAACCACCCCCACACCTGGGTCACCGCACCCGCCGCGACCTGGACCTTCACAATGGG # Right flank : GGAACATCCAGTGGTGATGTCTCAGGTGCTGCCAGCCTCTCCGCTTCTGGGCGGACGCGGCGCCTCACGTTGCGTGAGCAGTGGCTGCCTGCCTCACCAGCCCGGACGGCGGGTCTGTCAACGGTCATTGAGATGTCCAGGTAGGTGGCCGTGGGGTGTCCAGGCTGGTGGCCAGCAGAAACCCAGGCGTGTGGCCGGTGGTGTTCCCGGGTGGGTCAGTTCAACGGGACCACTCCTTTCCCGGCGAGGGCCTCGGCGAGGCGGTGTGAGTCGCCGGTGGTGGTCACGAGGTGAGCGTGGTGCATGAGGCGGTCGGTGCTCGCGCCTGCGAGGGTCTTGGGCATGATCGTGTCGAAACCCGAGGGGTGGATGTTGCTGGTGACCGCGATGGATCGGCGCTCGTAGGCGGCATCGATGATGCGGTAGAACGCCTCCGCGGCGTCCTCGCCGACCGGTAGCAGTCCGATGTCGTCGATGACGATGAGATCGGCCCGGCAGAT # Questionable array : NO Score: 3.07 # Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTTCGAGGGGTAGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 10103-8941 **** Predicted by CRISPRDetect 2.4 *** >NZ_NETX01000454.1 Streptomyces sp. SM14 2970_25532_7917618_2399-...1823-, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 10102 30 100.0 36 .............................. ATGTCCAGGGCGGGGCGCTGGTCGATCAGGATGAAG 10036 30 100.0 37 .............................. ACGACGTTCTCCACGATGACGGTCCTGTACCTGTGGT 9969 30 100.0 37 .............................. GGGTGCTTCTCGGTGGCGGACCTGAGGCCGGTGAGGC 9902 30 100.0 36 .............................. GTGTCGGCGGCGGGTGCGGTGGCCTCCGCCTGGCCC 9836 30 100.0 37 .............................. GCGGCTGGACGGCGAGGATGCGCCGCAGACGGCCCCA 9769 30 100.0 37 .............................. CGACCTTCGAGAGGCTGTCGCCAGACTTCACCTTGTA 9702 30 100.0 39 .............................. CTGAGCGCCCGGACCATCGGCTCCGGGCGGGCGCGGCCG 9633 30 100.0 37 .............................. ACCATTCCGGCCTGGAGAGCCATCTCGATGTCGAACA 9566 30 100.0 36 .............................. GCGGGCGTCATCGCGATCGGCTTGGACGGCGCGGTG 9500 30 100.0 36 .............................. GCGGGTGCGGGCCCGGTGGCGATGCCGGCCTGCTGG 9434 30 100.0 36 .............................. CGGGTGATGGTGTACGAGCCGTAGCCCATGTCGGTC 9368 30 100.0 36 .............................. CCCTGATTGAGCACGTGTGGCGCCCCGGTAGCGACT 9302 30 100.0 39 .............................. GGGGCGGTGCCGGTGGGCTCCAGCGTCGGCACGCCGGAG 9233 30 100.0 37 .............................. CCGGCAAGGAGGCGGGCGACAAGGCCGCCCAGGAGAA 9166 30 96.7 36 .................A............ AGCGACGGACGGGTGGGACCCCCGGCCGTCGCGGTG 9100 30 96.7 35 .........................G.... CGGAGCTGCGGGGCGACCTGAAAGCAGCGCTCCAG 9035 30 96.7 36 .........................G.... GAGCCGAAGGTGAGCGCGGCGGTGACGGCAACCGTG 8969 29 73.3 0 .C.....C.....-.........CCGG..G | ========== ====== ====== ====== ============================== ======================================= ================== 18 30 98.0 37 GTCCTCATCGCCCCTGCGAGGGGTACCAAC # Left flank : CACGGGCACGGCCATCGGTGAATTCCGGGGAGTTCACCAACGAGGAACCCCTGCCATCACTACTCCAACAGCGCCTCGAAAAAAGCAGAGTTAGCGATCCAGAACTCAGTGCTCCCGCTGCTGCGGACCACTACCGTCTGACCCACAACGGAACACGCCCGCATCACGACCCCGTCACCTTCGCCGGACGAAACATTGACCGTCACCTTCTCCGAGCACCGTGGCGGCTCCGTCCGCGCTCTTGGCGACGCGGGCACCGTCGATACAACGCGCCCCTCGCCGCTTCCCTCCTTCGACTCACCGTTGGCCGTCCGCCCACCGGTACGATGACAAGCGAGCCCGAACCAACGATCCGGCCCCCGGACAGGCCGGTCCGCCGTAGCCTGATCCCCGGGATTTCAGCAACTCTCCGGGGTTTTCCGCACTACCGGAGGTCCGCTGAAAAACCGCCCCCGCACCCCCGTCACCACACCCACCCTGACCTGGACCTTCACCATGGG # Right flank : CCGGGTGGCCGCCAGCCCGATCAGTGACGGACCCGGTGACGGCACGCGAGTCACGTCACGGGCGGGCAGGGACGGCGCGGGGCAGTTCGGTTTCGAGGCAGGTGCGGAAGGTGCGGGCGGGGCGGCCGGTGACGCGCTGGACGGTGTCGGTGACGCGGTCCTCGGCTCCTTCCGAGATGGCGGCGTCGAGGTCGGCCAGCATCGCGGCGAACTCCAAGGGCATCTGCTCGGCGAGGCGGTCACGGAACTGTGCGTTGGTGAGGCGCTGGTGGACCACGGGCCGGCCGGTGGTCTCGGCGACGATGGTGGCGATGTCGTCGTAGCTGAGGGCCTGCGGTCCGGTGAGGACGAGGTCGGTGTTGAGGGCGTGTTCGGCGGTCAGGGCGTGGACGGCGACGGCCGCGATGTCCTCGGCGTCGACGAAGCCGACCCGGCCGTTCCCGGTGGCGGTCCGGATGACGCCCTCGTCGCGGATGCTCGCGGCGTGCATGTGCGTGCCG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTGCGAGGGGTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [23.3-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 3 12747-12052 **** Predicted by CRISPRDetect 2.4 *** >NZ_NETX01000454.1 Streptomyces sp. SM14 2970_25532_7917618_2399-...1823-, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 12746 30 100.0 37 .............................. AGAGCTCGAAGAAGGTGAAGCCGTGGCGGGAGCGCGT 12679 30 100.0 40 .............................. CCCTGGTGGCGACCGGCGAGGGCCGCCCCCCGGCACAAGT 12609 30 100.0 37 .............................. ATGAGCGCGCACGACGAACCGCCATGGTCGCGCACGC 12542 30 100.0 35 .............................. CGCCCGGTTCGGCGTCAGTCGAGCTGGATTAGCCC 12477 30 100.0 36 .............................. TCGCGCGGGCAACGCTGACGGACCCGGGCGACCCGC 12411 30 96.7 36 ...............G.............. TGGTGCTCTGCGGTGATGGCGGCGGCCGGGCCGGTG 12345 30 100.0 36 .............................. CTCCGACGCCGGGGACGCTGGCGCACATCGACCACC 12279 30 100.0 34 .............................. CGCCACCACATCAGCGCGTACACGGTGATGGCCG 12215 30 100.0 37 .............................. GCCGTGATGATGCTGGTGTTCAGGATGGCGAGCGCCA 12148 30 100.0 37 .............................. GGGTCCGCCCAGACGTGGATGCGTGAGAACCCCGCGA 12081 30 96.7 0 ...............G.............. | ========== ====== ====== ====== ============================== ======================================== ================== 11 30 99.4 37 GTCCTCATCGCCCCTACGAGGGGTAGCAAC # Left flank : CCGCACGCTCAAGCGGTCCGTGGCCTACGACGAACTGCTCTACCTGGACGCCCTCTCACTCGCCCGGCACTGCCTGGAGGGCACCCCGTACAAGCCGTTCCGGATCTGGTGGTGAGCGACGGATGCACGTTGTCGTCGTCTACGACACCGACGCCGATCGCAACGCGGCGATCCTGCGCACCTGCCGCAAGTACCTGCACCACGTGCAGCGCAGCGTCTTCGAGGGCCAGCTGAGCCCGGCGCAGATGCGCCGCTTCCAGTTCGAGGTGGAGTCCGTCCTCGACCTCACCTACGACAACGTCCTCGTCTACACCTTCCCACCGGGCACGACCCCGGTCCGGCTGGAATGGGGAGCGGTCCAGACGATGCCGACGGACATTCTCTGAACACCCGGACTTCAGCAACTCTCCGGGGTTTCCCGCACTACCGGAGGTCCGCTGAAAAACCACCCCCCACACCCCCGTCGACACACCCACCCTGACCTGGACCTTCACCATGGG # Right flank : AACACGACGACACACGTGAGCGCCCTGCCGGTTCGTGGTGAACCGGCAGGGCGCTGGGACGAGGCGTCTCAGGCTTCGCTCAGGGTCTCGTTCGCGATGGCGGTGACGAAGGGCGCCCACGCCTCGGTGCGCACAACGAGCGCGGGCCCAGCGGACACCTTGGAGTCCCGGACGGGCAGAACACCGGGGTACCCGTCGGCCACCTCGACGCACGAGCCGCCGTCAGCGTTGCTGTAGCTGGACTTGCGCCAAGCGGCTGCGGTCAGGTCGATTCGGGATCGCATGGCAGGTCCTCCGCAAGGTCGGTGATGAGCTGACGTGATTCAGTTGGGGACAACGCGTGATCGCGGATCCGATCGTAACTGAGCTGCAGTCGCTCCACGGCGGCGGTTTCCTCGACCAACTCGCTGGAGTGGCTGGTCTCCACCCACGCGACCGTTCGACCTTCCGGTAGCCGAAGGAAGTCGATGTAGGTGTTGGACAGGGCGTGAGGCCCGGCT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTACGAGGGGTAGCAAC # Alternate repeat : GTCCTCATCGCCCCTGCGAGGGGTAGCAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 1 19325-19656 **** Predicted by CRISPRDetect 2.4 *** >NZ_NETX01000509.1 Streptomyces sp. SM14 3031_26051_3961864_1439-...2039-, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================================================================== ================== 19325 29 69.0 90 AGC.C............A..C...C.G.T ATCCGACGCCTCTGGCAAGATGTCGGAATGACCCGCTCGACCCATGGCAAAGGAACTGCAAAGCCCTCCTAACGCACCAGGTCGCGAAGG 19444 29 100.0 32 ............................. TGGCGGACGTCGTCCGCGCTGAGCGGGCGCAT 19505 29 96.6 33 .........................C... TAGCGGACGCGGCCGGATTCGGTGAGAATCCGG 19567 29 100.0 32 ............................. CGCAGCACGCTGCTGGGGTCCAGGTGGGACGA 19628 29 82.8 0 ...C.................CC..A..T | ========== ====== ====== ====== ============================= ========================================================================================== ================== 5 29 89.7 47 GTGTTCCCCGCGCGAGCGGGGGTGGTCCG # Left flank : TCTCCAGCACGTGGTCCCCGGGGCGCGGATCGAGGCGCCGCAGAAAGGCCACCACCAGCGGGGGGCTCGTCGAGGAACTGGTCGGGGCGCGGGTCAGGGCCGCGTTGCCCTCGGTCAGTTCGGTTCGCCCGTCGTCGAGTTGGGTGTAGATCGCCGCGCTGGAGGAGACGGCACGCCACCAGCCGTCCGCGTCGTTCTCGCGGTCGATCCACCGGGCCGGGCCGGCCGCACTGGCCGCGGCCCAGGCGCGTGGCGGCACGAAGGCGTGCCGTGGCACCTCGATCAGCGCCTGCGCCAGACAGGGCGCCCCGCGCTCCGTCGTCACGACCGCCCCTCCCGCTCGTCGCGTCACGAATGCCCGCGCCGCGGGCGTCCGTTCATGATGCCCATCGGAACGGCCACTCATCCCCGGAACGCAACCGTGCGCCCCCACCGAGCATCACCCGCCCCGTCATGCTCGTCGTGGTCCTGCGAGTGGGCCACTGACCGCCGCTATCCAC # Right flank : TCTCCTAGCCGGCGCGCTGGGACATGGCTGAACGCGCCGCGCGGGGTGTGATCGTCCGGCGGGACGGTCACACCCCGCGCGGCGGGAGCACGGCGGGCGGGTGAGCGGATCAGCCCTTGACCGCTCCCGAGGTGAGGCCGGCCGCCATCTTCTTCTGCACGATCATGAAGAAGATCACCACCGGCAGCGCGATCAGCACCGAAGCGGCCATCAGTGAACCGAAGTTGGTACCGCGCTGGGTGGTCATGCTCATCACCCACACCGGCAGCGTCCAGCGTTCGTTGTCCTGCATGATCACGTAGGCGAGCAGGTACTCGTTCCAGGTGTTGACCAGGGCGAAGACCGAGGTCGCGGCGAGTCCGGGGCCGATCAGCGGGAACACCACCCGCCAGAACGCCCCCATCCGGGTGCAGCCGTCCACCATCGCCGACTCCTCCAGTTCCCTGGGGATGTTGATGATGAATCCCCGGAGCATCCACACCGTGAACGGCAGCGCCGAG # Questionable array : NO Score: 4.07 # Score Detail : 1:0, 2:3, 3:0, 4:0.49, 5:0, 6:0.25, 7:-1.39, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCGAGCGGGGGTGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCGCGCGAGCGGGGGTGGTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.80,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.78 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 10847-8364 **** Predicted by CRISPRDetect 2.4 *** >NZ_NETX01000456.1 Streptomyces sp. SM14 2972_68024_9244037_2399-...1362-, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================================================================= ================== 10846 28 100.0 33 ............................ CCGCCAGCAGACGAAGAGGCTGTTCGGGCGGGT 10785 28 100.0 33 ............................ GGCGAGGGCGACGGTGTCGGGCAGGGTGGCGGC 10724 28 100.0 33 ............................ GCTCCGCGAGCGGCCCCCACGGGCTGACGGCTG 10663 28 100.0 33 ............................ GGGGGTCCCGGGGCCCGCCCGAGGACGCCGACT 10602 28 100.0 33 ............................ TCGATCTCGGTCACTTCGACATCGAGGCCGGCG 10541 28 100.0 33 ............................ GGGGCTGCTGGCGCGGTGGGAGGTCGACGTCCT 10480 28 100.0 32 ............................ CAGGGCCCGGTCGGGGGCGACATCGTGCCCCG 10420 28 100.0 33 ............................ CTGACTGCCGCCTGACACACCGACGGGCCACCC 10359 28 100.0 33 ............................ GGGCTGGGCGGACGCCGCGGTGAGTTCGGCGAG 10298 28 100.0 33 ............................ CGCGGGCGCCTCCCTCATCGTGGCAGCGGACAC 10237 28 100.0 33 ............................ GCGGTACCGGCTGCGGCGGCCGGGCCGGACCTC 10176 28 100.0 33 ............................ GGCGATCGCGGCGGCCCTGGAACGGCGCGAGAA 10115 28 100.0 33 ............................ CCACCTCCACGGCGACATCAACTTGCTGAAGTC 10054 28 100.0 33 ............................ GTCGCGGCCAGCTACTCGCGCACGGGAGGTGAC 9993 28 100.0 87 ............................ CGAGATCCGCTGCACACCGCCGAGCCCGCCACCGTCGCCCCCGCACCCGCCCCCGCACCCGCACCCGCACCCGCACCCGCACCCGCA 9878 28 85.7 33 CC...A..................A... GTCAGCCCCAGGAGGGGGGCGCAGGGGGGACCT 9817 28 96.4 33 .................A.......... GCTCACCGATGGCGTAGGTGACGGTCTGCGCTC 9756 28 100.0 33 ............................ GCGGACCCGGCTGGAGATCCGCACCGCAGGCGA 9695 28 100.0 33 ............................ GGCCGGCGAGGTGCGGGCTGGCTTCGAGCTGCT 9634 28 100.0 45 ............................ CGCGTGGAGCATCCACCCGGTGTCAGTCGTCTTGTCGCCCCCGCA 9561 28 89.3 33 CC...A...................... GGGCCGGAGATTCCCGCCTCCGGCCCTTCATCC 9500 28 100.0 33 ............................ CGGATTCCGGCGGCCCGCCGACTGGCGATGACG 9439 28 100.0 33 ............................ CGCGGGCGGCAGTTCACTCGAAGGGGTGAAGGT 9378 28 100.0 33 ............................ GGCCGCCGCCTCGGCTGCCTGCCGGGCCTCTTC 9317 28 100.0 33 ............................ GGATTTGATCCCGAGCGCGGAGGGCGTGGCGGC 9256 28 100.0 75 ............................ GCGGCGGAGGGCATGTCGCCGGGCGAGCAATTCGTCGCCCCCGCACCCGCACCCGCACCCGCACCCGCACCCGCA 9153 28 89.3 33 CC...A...................... CTCGCGCTGCGCCCGTAGGGCCTCTTCGGGGGC 9092 28 100.0 33 ............................ GCTCCTCAAGCTGACCATCGGGTTGGACGGTCT 9031 28 100.0 33 ............................ GTCCTCGACATGCTCGACCCGCGCGCCTTCTAC 8970 28 100.0 75 ............................ CCAGAGCGCGGCGACCAGGAGCACGGCGCCACCGTCGCCACCGCACCCGCACCCGCACCCGCACCCGCACCCGCA 8867 28 89.3 33 CC...A...................... GGCCCCCCATCCGTTCGCTGCGGAGACGGCCTG 8806 28 100.0 39 ............................ GCCCGAGCGAGGTCACGACGGGCCTCCCTCGCGGTCGCC 8739 28 85.7 63 CC...A.......T.............. GTACCGGCCTTCCTTCGCCTTCAGCCAGTGCCCGTCGCACCCGCACCCGCACCCGCACCCGCA 8648 28 89.3 33 CC...A...................... GCGCTTCCCCTTCTCCGTCTCGCTGCAGAACGC 8587 28 92.9 33 ....................CT...... GTGCTCTACGTAGTGCGTCCACCGGGCGTGCCA 8526 28 100.0 33 ............................ GGTGGGGGCCACTCTTTCGTTGAAGAGTGAACC 8465 28 96.4 45 .......G.................... GGCAGGGAACCGGAGCCGGAGCCGCACGTCGCCCCCGCCCTCGCC 8392 28 89.3 0 CC.........C................ | G [8371] ========== ====== ====== ====== ============================ ======================================================================================= ================== 38 28 97.5 38 GTCGCCCCCGCACCCGCGGGGATGGTCC # Left flank : CGCACCCTTCGGCCACAACTGCTGGAAAGCCGGAGTTGCTTTCCCGCAATCGTGAATACCACAGAGCCAGGCGAAGAACAGCCTGCCCTTCCCCGCCCCGCCGGCGACCTCATCCAGCATCTGCTTCGTGGACGACGCCAAGAACCCGTCCCACATCCGCTCGGCGACCGCCGCCGTATCCAAAAGATGCGACAACAACAAGTTCTTCCTGCCGCCACCCTTCTCTGCGGACTTCCCCCACAACACGCCAAGCAACAGCTCGACCTCTCTGCCACCGAAAGGCTGTTCGCGCCCCACCCCGCCACACTCCCGTCTCCGGCTAACCTGACCGACACACTAGAACCCGGCACTGACAACGAACCCTCACCAACAACCCGCCTCCCGCCGCACCCACACCCACACCCACACCCACACCCACACCCACACCCACACCGATGCAGCACCAAATCCAACCGACTCCAAACACGACTGAGCCGCTCTAAAGCACCAGGTCAGGAAGT # Right flank : CTGCCGCGCTCCTGGGTCCCTGTCGTCTCCGTGGTCGCCCCCGCACCCGCGCTACCCCCGGCCAGTCTGCGCCTCAGCGAAGGAGGGAGAAGATCAGTGCGGCGACCGCGCCGAGGGCTGTTCCGCAGACGAGTTGTGCCGCTGTGTGGGCTTTCAGTACGTGGCGTGACCAGCCCACCAAGGGGATGAGCAGTGCGGCGGGAAGCGCCGCGGCACCGAAAACAAGAAGCAGGATCATGACCGTGCCGCCGGCCACCGCGTTGTGGACGGAGATCTGCCACCAGATCGTGACCGCCAGCGTGGCCGCCAGTCCGACGAGCATGGCGACGACCAGTGCGGTCACCTCGATGGGGGCACCCAGGCCCAGAAGAAGCGCGATGCCCAGAACGACGGAGAACGCGCTCGCCGCCATCGGCACGACACGCTGTCTCCGCACGCGGATGTGCTTGTCCGTCACGCGTCCGCGCCTCATTCCGATCCGCACGACGGCTGTCGGTACG # Questionable array : NO Score: 5.84 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:-0.29, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCGCACCCGCGGGGATGGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGACCCCGCACCCGCGGGGATGGTCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [21.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 21016-22483 **** Predicted by CRISPRDetect 2.4 *** >NZ_NETX01000456.1 Streptomyces sp. SM14 2972_68024_9244037_2399-...1362-, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 21016 28 100.0 33 ............................ CTCCTGGACCAGGCGCTCACCGCCGCTGGGAAG 21077 28 100.0 33 ............................ CCGGGGCCGGCGCCTCTCCCCGCGGTGTCTCGG 21138 28 100.0 33 ............................ TGCGTACGCCAGGATCGGCGCGCCCCGCTCGGC 21199 28 100.0 33 ............................ CCGGAAGGTGACAGGAACAGGCGGAGACATACG 21260 28 100.0 33 ............................ GCGCGCCATTGCGCGGATGGACGCCGATGGCGG 21321 28 100.0 33 ............................ GGCTGGCTACGGGGGAGGGGGGGTCGTCCCCGG 21382 28 100.0 33 ............................ GCTCATGGCGCGGCCGATCTCGTGCGGCTCCAA 21443 28 100.0 33 ............................ TCCCCACACCCATGCATCACGGCGGGATGGTCA 21504 28 100.0 33 ............................ TGCCGGGGGCGTCCCCAGAGGTGACCGGGTACT 21565 28 100.0 33 ............................ CCGCCGCGACCGGCAAGCCGAGCAAGCAGGCCC 21626 28 100.0 33 ............................ CTCGGCGACGGCCGGCAGGCGCACCGCTGCCCA 21687 28 100.0 33 ............................ GACGCACCTGCCGATCGGGAAGCTGGAGTACGC 21748 28 100.0 33 ............................ GCGGGAGCCGGACCTGATCTGGGAAGCCCGCCC 21809 28 100.0 33 ............................ GCGCGCCCGCCGCCGTGACCGGGGTGGTGAGAT 21870 28 100.0 33 ............................ GGGTCATGCCGCGATCGCCGTTCGCGGTGGCGA 21931 28 100.0 33 ............................ GATCGTCTGGTGCCGGAGGCTGTAGAAGGCGCG 21992 28 100.0 33 ............................ GTCGTCGTTCTGGCAGACGACTTCGGCCTTGAC 22053 28 100.0 33 ............................ GCTGGCGTCGAATGCCGGGTTCGAGCCGATGAG 22114 28 100.0 33 ............................ GGGGGCCGCTGACCACGGAGCCGCTCGGTCTCC 22175 28 100.0 33 ............................ CCCGGCGACGCGCCAGGCCCGCGACGATCACCG 22236 28 96.4 6 .........................C.. GGGCTG Deletion [22270] 22270 28 78.6 34 .G...T..TC....A......T...... CGAGCGAATCCGGCAGTGCATGTCACCGCACCGG 22332 28 89.3 33 ........G....T.............T CTCCCCGCCGGCGCCCGCCTCCCCGCCACTCGC 22393 28 92.9 33 .....................G.....T TTACCTCCCCGACACCGGGGTGGGCGACGGGAA C [22397] 22455 28 71.4 0 TG..G.T.....GT.........CT... | A [22472] ========== ====== ====== ====== ============================ ================================== ================== 25 28 97.1 32 GTCGCCCCCGCACCCGCGGGGATGGTCC # Left flank : CTGGGACGAACGCAGCGGCTCCGTCCCCGCCGGCGTCAACTGGGCCACCCACCCCATGGAGCCGCCCACCACCCAGGCAGACATGGGGGAACAGCACATCGCCATCATCGGACCGGACCTCGACCAGCCCCCGACACCGGACCAACCTCGGTGACCGTCATCGTCCTTATCGCAGCCCCCGACGGCCTCCGCGGCCACCTCACACGCTGGATGGTCGAAGTCAACGCCGGAGTCTTCGTAGGAAACCCCAGCCGCCGAGTCCGAGACCGCCTCTGGGCACTCCTCGCCGACCGCATCGGCGATGGCCAAGCCGTCATGGTCGAAGCCGCAGCCAACGAACAAGGATGGGCCACCCGAACCGCCGGCCGCGACCGCTGGAGACCAGTCGACTACGACGGCCTCATCCTCTCCGCACGCAACCGCCGCCCATGACGCACCACCCCCAAAACCAACCGACTCTGAACGCACCCCACCCGCCCTAGCGCCGCAGGTCAGCAAGT # Right flank : CAGGTCTTCATGCGGGCAAAGGCGTGCTCGACGCGTGCGCGGACCCTGCGGTGCGAGGCGTTGTGCTCCTCCTTCCAGTCGGGCAGTTCGGCCTGGCCGCGATCGCGGCGGTGCGAGATGAGCAGGTCGGTACCCCGGTAAACCGTCGTGGGCGCCGACGGCGGCTTTGGCGCCGGGCAGCTCCCAGGCCTTCGAGTCGTTGCGACTGCCGCGCAGCGGCCGGCAGACGGCAATGCCCAGCCGAGGGTCAGCGCCGACGACGATCTGGTAGTTGGTGGAGTAGCGGTAGCTCTTCGACTGGTTGGCGACGGTGTGGTCGCGGGTGGGCACCGAGATGCCGTCGACGATGAGCACGGCGTCCTTGCGGAGCCGTTTGCGCGGCTGCAGGGCCAAGGCCGGTCCGAGGTGGTCGACGATGCGGTCGGCCGCGGACTGGGAGATGCCTACCGCAGGGTGAGGTTGGTCCGCCAGCGGGCGGTGACCAGCAGCACCCGGTCCTC # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:-0.09, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCGCACCCGCGGGGATGGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGACCCCGCACCCGCGGGGATGGTCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-22] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //