Array 1 95328-94859 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI260540.1 Selenomonas sp. oral taxon 892 str. F0426 Scaffold346, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 95327 36 97.2 37 ...................................A TAGTGAGAATATTCATTTACCACATATGCTACTGATA 95254 36 97.2 37 ..............T..................... TTCTGATACTTCATCATGTGCTCGATATGCTCGATAA 95181 36 100.0 34 .................................... CATTCTGTATCTCCTTTCACCCAGTATGTCATCA 95111 36 100.0 36 .................................... CGAGAAGTGAGAGCAACGAATGTGTGTGGATAAATT 95039 36 100.0 38 .................................... TCCTCCATAATCATATCAAACGCCTCTGCATTGACGTA 94965 36 100.0 35 .................................... TCTTAGGCGCGCTTGATATTGTAGATCGAACCGGA 94894 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 7 36 99.2 36 AATTTAAGTACCAGCACCCCGCAAGGGGACGGAAAC # Left flank : CGTTCGGTCAAGAAGACCCTCACCATCCCCGCCTGGATGGACACGCTCGCACGCGAGCACAACATTAACTTCTCTCAGCTTCTGCAGAACGCGATTCGTCGTGAATGCGGGATGGAAGCTTAATGGACTTAAAGCGAACCCTGTTGTGCAATATGAACGAGGAGAAATTCGCGCCGCCCCAACAAGCACAAGGGGCACAGCGTTTTTTAGCACAAATGGACTGCACTTGTGCGGCTCAAAATTCATCCGCGCCGGAAACTGCTCTTTTCGGCGAGACTCCGCAAGGGATTGCACGGCGAGGAATTTAAGTACCAGCACCCCGCAAGGGGACGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAGTACCAGTACCCCGCAAGGGGACGGAAACTATGAAGATGATACAATGCTTGAGACTGTTACC # Right flank : GGATTGTAGACGTACATGTTTTCGCCGTCGTTGCAATTTAAGTACCAGTACCCCGCAAGGGGACGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAGTACCAGCACCCCGCAAGGGGACGGAAACTCGCCCGGACGGACGGTATAGACCTCCTCGACAAGATTTAAGCACTAGCACCCCGCAAGGGGACGGAAACGTCTATTTTGTCAACAAATCAGGGGGCGATGTGATGTTTGCTTACATTACGGAGGAAGGGGCGTACATTCAGAAGCGCGGCGGGAATTTCGTCATCGGTCGCAACAATGAATGCGTGATGGAGATTCCCGAGGAGGTACTAGAGTCGCTGACGCTGATCGACAGTGTACAGGTGTCCTCACAGGCGATGGTGGAGCTGCTGCGGCTCGGCGTTCCGGTTACATGGCTCTC # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATTTAAGTACCAGCACCCCGCAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,13] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.30,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.74 Confidence: LOW] # Array family : NA // Array 1 180063-180493 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI260546.1 Selenomonas sp. oral taxon 892 str. F0426 Scaffold538, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 180063 31 100.0 35 ............................... AGGATGTGATCGGTGCATATATCCGCTCCGTCGGT 180129 31 100.0 36 ............................... CGTGAATCCGTTACCCTTGCGCGACACATAACCAGT 180196 31 100.0 36 ............................... GATTCCGGGGGTGGATTCCTTCCGAATTGTGCGCGT 180263 31 100.0 36 ............................... GCCTTGACGCAAGATCGCGGATGATTGCACGGGGGT 180330 31 100.0 36 ............................... AAGAACGAGCAGGCACGCATGGAGGTCATGCGGAGT 180397 31 100.0 35 ............................... GAAACGATGGCGACGCTCACACTTGCCGACACGGT 180463 31 96.8 0 ..............................N | ========== ====== ====== ====== =============================== ==================================== ================== 7 31 99.5 36 CGCGCCCCGCACGGGGCGCGTGGATTGAAAC # Left flank : CGTGCAGAACTCTGTCTTTGAGTGTAAGGTGGATCCAACGCAATGCAAGCAATTGGAACTCGCACTGCTCGACATTATTGACCTGCAAAAAGACAGCCTGCGATTTTACTACCTCGGCAAGGATAAAGGACCAAAAGTAACGCATTATGGTGTTAAAGAGTCCTATGACTTGGAGGCGGCCATCATCATCTGAGCATTCATTACTGAGTGCGAAGGTGAAGTGAACAGAAAATAGAATGTAAAAATATAGGTGCGAGCACCATGCTGCAGGAGGGGCGTGGGACTTAGGTGCCGAGAAAATCGTATTTGTGGAGGGAAATACCCATAAATGCGTGGCAAAAGAGGGAAGTCGTGACCTCTTTTGCTGTCGCGCCCCGCACGGGGCGCGTGGATTGAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCGCGCCCCGCACGGGGCGCGTGGATTGAAACGTAGCAATAGGACGTTGTGTCCCATCGTGGAGAGGTCGCGCCCCGCACGGGGCGCGTGGATTGAAACATATCAAGTAAGGAGGATATAATATGTTAGTACATGTCGCGCCCCGCACGGGGCGCGTGGATTGAAACTCTACTGCGACACCCGTCGATGCGAGGTCATTTGTCGCGCCCCGCACGGGGCGCGTGGATTGAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCGCCCCGCACGGGGCGCGTGGATTGAAACAAATAAAAAATATCCTCGAATATCCGAGGATTGA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCGCCCCGCACGGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.60,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.74,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 180595-180826 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI260546.1 Selenomonas sp. oral taxon 892 str. F0426 Scaffold538, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 180595 31 100.0 36 ............................... GTAGCAATAGGACGTTGTGTCCCATCGTGGAGAGGT 180662 31 100.0 37 ............................... ATATCAAGTAAGGAGGATATAATATGTTAGTACATGT 180730 31 100.0 35 ............................... TCTACTGCGACACCCGTCGATGCGAGGTCATTTGT 180796 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ===================================== ================== 4 31 100.0 36 CGCGCCCCGCACGGGGCGCGTGGATTGAAAC # Left flank : GGATGTGATCGGTGCATATATCCGCTCCGTCGGTCGCGCCCCGCACGGGGCGCGTGGATTGAAACCGTGAATCCGTTACCCTTGCGCGACACATAACCAGTCGCGCCCCGCACGGGGCGCGTGGATTGAAACGATTCCGGGGGTGGATTCCTTCCGAATTGTGCGCGTCGCGCCCCGCACGGGGCGCGTGGATTGAAACGCCTTGACGCAAGATCGCGGATGATTGCACGGGGGTCGCGCCCCGCACGGGGCGCGTGGATTGAAACAAGAACGAGCAGGCACGCATGGAGGTCATGCGGAGTCGCGCCCCGCACGGGGCGCGTGGATTGAAACGAAACGATGGCGACGCTCACACTTGCCGACACGGTCGCGCCCCGCACGGGGCGCGTGGATTGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGT # Right flank : CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCGCCCCGCACGGGGCGCGTGGATTGAAACAAATAAAAAATATCCTCGAATATCCGAGGATTGAAGTCGCGCCCCGCACGGGGCGCGTGGATTGAAACACCGTGAAGGAAATGCGGGAGCTGCGCAAGGCGGGGTCGCGCCCCGCACGGGGCGCGTGGATTGAAACCTAGGGCTGTCTGATTGATTGGCTACGCCTAGTGTCGCGCCCCGCACGGGGCGCGTGGATTGAAACCTGTATAACGGTTTGATGGCAGGGACACCGCCACGTCGCGCCCCGCACGGGGCGCGTGGATTGAAACAGCAGATTCCAGGCTTTCCGATTCCTCTATGTCGTGTCGCGCCCCGCACGGGGCGCGTGGATTGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 8.86 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCGCCCCGCACGGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.60,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.74,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 180928-181295 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI260546.1 Selenomonas sp. oral taxon 892 str. F0426 Scaffold538, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 180928 31 100.0 37 ............................... AAATAAAAAATATCCTCGAATATCCGAGGATTGAAGT 180996 31 100.0 37 ............................... ACCGTGAAGGAAATGCGGGAGCTGCGCAAGGCGGGGT 181064 31 100.0 35 ............................... CTAGGGCTGTCTGATTGATTGGCTACGCCTAGTGT 181130 31 100.0 36 ............................... CTGTATAACGGTTTGATGGCAGGGACACCGCCACGT 181197 31 100.0 37 ............................... AGCAGATTCCAGGCTTTCCGATTCCTCTATGTCGTGT 181265 31 96.8 0 ..............................N | ========== ====== ====== ====== =============================== ===================================== ================== 6 31 99.5 37 CGCGCCCCGCACGGGGCGCGTGGATTGAAAC # Left flank : GAAACGATGGCGACGCTCACACTTGCCGACACGGTCGCGCCCCGCACGGGGCGCGTGGATTGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCGCGCCCCGCACGGGGCGCGTGGATTGAAACGTAGCAATAGGACGTTGTGTCCCATCGTGGAGAGGTCGCGCCCCGCACGGGGCGCGTGGATTGAAACATATCAAGTAAGGAGGATATAATATGTTAGTACATGTCGCGCCCCGCACGGGGCGCGTGGATTGAAACTCTACTGCGACACCCGTCGATGCGAGGTCATTTGTCGCGCCCCGCACGGGGCGCGTGGATTGAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCGCCCCGCACGGGGCGCGTGGATTGAAACATGAGGCACGCCCACACATAGCGTGGGATGTCCTGTCGCGCCCCACACGGGGCGCGTGGATTGAAACAGAAATGCAAGATGAGAAGCGAGCAGATGAGATGTCGCGCCTCGCATGGGGCGCGTGGATTGAAACAGACAGCGTCCTTGTGGCAAATGCGGCGAATGGGTCGCGCCCCGCATGGGGCGCGTGGATTGAAACTGACGGTGCGAAAATCAACATCGACCGCATAATGGTCGCGCCCCGCATGGGGCGTGTGGATTGAAATCAAAATCTTCCTATCCACTGGACTACGAGCGCATGGTCGCGCCCCATACGGGGGGCATGGATTGAAATAGTGTTGGAGATTGCTATTTCATCCATCTTGACG # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCGCCCCGCACGGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.60,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.74,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 181396-181760 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI260546.1 Selenomonas sp. oral taxon 892 str. F0426 Scaffold538, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 181396 31 96.8 36 ...........C................... ATGAGGCACGCCCACACATAGCGTGGGATGTCCTGT 181463 31 93.5 35 ........A..C................... AGAAATGCAAGATGAGAAGCGAGCAGATGAGATGT 181529 31 96.8 35 ......T........................ AGACAGCGTCCTTGTGGCAAATGCGGCGAATGGGT 181595 31 100.0 36 ............................... TGACGGTGCGAAAATCAACATCGACCGCATAATGGT 181662 31 93.5 37 ..................T...........T CAAAATCTTCCTATCCACTGGACTACGAGCGCATGGT 181730 31 80.6 0 ........AT.C....G..A..........T | ========== ====== ====== ====== =============================== ===================================== ================== 6 31 93.5 36 CGCGCCCCGCATGGGGCGCGTGGATTGAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCGCCCCGCACGGGGCGCGTGGATTGAAACAAATAAAAAATATCCTCGAATATCCGAGGATTGAAGTCGCGCCCCGCACGGGGCGCGTGGATTGAAACACCGTGAAGGAAATGCGGGAGCTGCGCAAGGCGGGGTCGCGCCCCGCACGGGGCGCGTGGATTGAAACCTAGGGCTGTCTGATTGATTGGCTACGCCTAGTGTCGCGCCCCGCACGGGGCGCGTGGATTGAAACCTGTATAACGGTTTGATGGCAGGGACACCGCCACGTCGCGCCCCGCACGGGGCGCGTGGATTGAAACAGCAGATTCCAGGCTTTCCGATTCCTCTATGTCGTGTCGCGCCCCGCACGGGGCGCGTGGATTGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT # Right flank : TAGTGTTGGAGATTGCTATTTCATCCATCTTGACGGCTCATGCACCCATGGCTCTTGAAATGGATGTGACAACAAAATAAATATGGCGTGTGAATTAAAACACTGTTCATACGCCGTATTCTCGAGGCATTCAGGTTGTTTCTAGCAATCGTGAGTGGTTTTTTCCGGAACTGTGAAATCGAGCATCGAAAACGCTTGCGCGTCGTACTCAAACGTGTTATACTATCCCTTGTCGCGTGAGCGTGTGCTTCTTTCGTGCGCGCTCGCATAGGATTAACTCTGCCGCTTCGCGAGGGGCGGCCATAGACCGAAGAGGAGGTGATTTCGTGAGATTGTACGAAGTCATATTTATTGTGAAGCCGATGGAGGAAGAAGCGACAAACGCCGTCATCGAGAAGTTCACGAAGCTCATTCAGGCAAACGGCGGTAAGATTGAGAAAGAGGATCGCTGGGGCAAGAAGCGCCTCGCCTATGAGATCAAGGACAACACAGAAGGATAC # Questionable array : NO Score: 6.85 # Score Detail : 1:0, 2:3, 3:3, 4:0.68, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCGCCCCGCATGGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.60,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //