Array 1 74482-72229 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP007669.1 Moraxella catarrhalis strain ATCC 25239 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 74481 28 100.0 32 ............................ ATATCGTGGATGAATAGGTGTATATTCAAGCT 74421 28 100.0 32 ............................ ATTCAGCATACCTCCGCCACGCTCTTTGGCAA 74361 28 100.0 32 ............................ ACCATGGGCGGAGACGGTGGTGGTCTTGATGA 74301 28 100.0 32 ............................ TTGCAGACCAAGCTCTGATGGTACTGCTACTT 74241 28 100.0 33 ............................ AACCCCAATTTGGGGGCAAGTGTGGACATGGAT 74180 28 100.0 32 ............................ GCCGATGGCTTCTTGGAGCATGGCAGCCGCCC 74120 28 100.0 32 ............................ TGCAAACAGCTCATCACTGATTTCAATCACTT 74060 28 100.0 33 ............................ TTATTTTTGACAAAAAAAACAAACCCACTCATA 73999 28 100.0 32 ............................ ATATCCAGCGCCATTACCAGCCACCCACTGCA 73939 28 100.0 32 ............................ ATGATTGAAAATGGGGCTTTATTTTAGGAGAT 73879 28 100.0 32 ............................ GGTATTAACAGCAAGATACCAAGCATTGAAAG 73819 28 100.0 32 ............................ ACGATAAAACTGGGTCAAATTGCCTTGTAAGC 73759 28 100.0 32 ............................ AACTTTTTCACGCCACCGAAGATAACTGTTAT 73699 28 100.0 32 ............................ AGTTTGGGATTGCGGAAATGGATAGATGTTTA 73639 28 100.0 32 ............................ TCTTGTACCATCTGAGTATTTTTTCATCATTC 73579 28 100.0 32 ............................ ATGTAAACCAAATCACACAAACCTACCAATAT 73519 28 100.0 32 ............................ TCGTGAAGTTATCAGCTTGCAGGGCATTAATA 73459 28 100.0 32 ............................ CAGAGCTCGTCAGTACAACATGGCTATCTGAG 73399 28 100.0 32 ............................ ATTTAGTGCTTATGTTGATGTTACTCAACAAA 73339 28 100.0 32 ............................ AATTTGCGTCGGCGCAAATAAGAGGGTTAACA 73279 28 100.0 32 ............................ TAAATGTTGCATTAATCAGACCAACAATAATA 73219 28 100.0 32 ............................ AAGCTAAAGAATTTAAAATCAAATGGCAACCC 73159 28 100.0 32 ............................ AGTGATAGGGTATTTTCCTGCCACTTTCAAAT 73099 28 100.0 32 ............................ ATCAGATGATGGCAGGTGGTTTTTTGATTATT 73039 28 100.0 32 ............................ TGCTTGTTCACGCCCTGCCTGTGGACTAAAGT 72979 28 100.0 33 ............................ ATTCTGCGGCTTTAACAACAGATTCTGGAACAT 72918 28 100.0 32 ............................ ATAAGGCTACCGCTCCACACCCATTCGGTCAT 72858 28 100.0 32 ............................ ATGACAACAAAAAGTGAAAGAGTTAAGCTTAC 72798 28 100.0 32 ............................ TGATAAATCTACACCACGATTTTGTAATTCAT 72738 28 100.0 32 ............................ CAGCTGGCAGGCAAAGCAAGCACAGCGTCAGT 72678 28 100.0 33 ............................ TGTTGATGCTCCTATGTCGTATAGCACCCCGTC 72617 28 100.0 33 ............................ ATTTTTCTCAGAAGGCGGCCGCCTAGTTTTAAA 72556 28 100.0 32 ............................ AAACAAGTCGATAAGATTATTGAACCACTATT 72496 28 100.0 32 ............................ GACGATTACACGGCTTGAAGTATTTAGCCGAT 72436 28 100.0 32 ............................ AATCAAATATCTGCTGATGAGATAAAACAAAC 72376 28 96.4 32 ...........T................ CACCCAAAGACATTTCAATTCAGTTACTTAGA 72316 28 100.0 32 ............................ GTTGAGCTGTATCCTCTGATTCTCTTATTGAT 72256 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 38 28 99.9 32 CTTCACGACCGCACAGGTCGCTTAGAAA # Left flank : TGCCTGTGCCAAGTAAAATGACCGTCGTGTTGGCGATCGGAATATTATAATAGTGGTTTTGGTATTTCGTTTCGGTCAGGTATAAGATACGCCCATCTTTTTGCATGACTCGGCAATGCTCAAGATAAAATAAATTCGCCCGTTTGGAGTGTAAAATTGCTTTCAAATCGGTCGGTTTGAGCGTATTCATAATAATACAAATCCATGTTTAATGATTCAATTTTATCCTAACAATTTTCAACATCATTTAATATGATTTTATTGGATTATAAACTAAAAATAAATTTATACCAATCATTTTTTAATTGTATTCAGCGATTAAAATGTTTTAAGATAACCCAACCAGAAGATGGAAAAATAACTGATTGACCCTTTATTTTTTTACTATTTAAAAACTTGAATATTTTCAATAAGTTATAACATGAAGATTTTTGATTGGGTTTTTGACAAATTTTATCATAATGACTTGTTATTTCTTATTATTTTGGTTTATACTAACT # Right flank : TTTTGTTCTATGGCTACGCTGATTATTTAAAATTTTTGTGCCAATCCCTTGAAAATTTTATCCTTAACCATTATGAAGATGGGGAATTTATATTAACTTTTTTGGGGCAATTTATGACCGAGCAAACCACCGAACAAACCACTATGGAAGAGATTATGGCTGAGACGACAACCGAGCAAGTCGAAGCACTTCATAGCCAAATCCAAGCGCTAGAAAATGAAGTCAAAGAAGCCAAAGAGACTGCCGCGCGTGCCAATGCCGAAAGCTATAATGCCCAACGCCGCATGGAACAAGAAACCGACAAAGCCAAAAAATTTGCACTACAAAAGTTTGCCAAAGAGCTTTTGGAGGTGGTTGACAATCTAGAGCGCGCCATTAAAGATACTGAAGAGACAGGTACAGATGACGCATCACTTAAAGGCATTCGCCTAACACATAAAGTACTGCTTAGCATCCTTGAGAAAAATGGCGTCGTGGCCGTGGGTAATGTCGGTGATACA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACGACCGCACAGGTCGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTCACGACCGCACAGGTCGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.10,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [71.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //