Array 1 875487-874540 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP066067.1 Corynebacterium bovis strain FDAARGOS_1052 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================================================== ================== 875486 29 100.0 32 ............................. GGCTGGCACGGGTAACCACCGGTGAGAATGTC 875425 29 100.0 33 ............................. GCATGGTCACCCCCCCGTGAGCTCCGAGCCGCC 875363 29 100.0 32 ............................. ACAGCCCCGCTCGAGTCATGGCGGACGTACGC 875302 29 96.6 32 ............................G CGGCTGTGCATGACGTCAATCGCTGCGTTCAT 875241 29 100.0 32 ............................. ATCTGGGACGTCGCCGCCCGCAGATCATTCGT 875180 29 93.1 32 .............CG.............. ATGGTCGGCCAGGTGTGCGGTCTTCTGCATAG 875119 29 93.1 32 ............C...............T GCTTCGTTGAGTGTCGGTCCGGCAGGTGCCTG 875058 29 100.0 32 ............................. GTGGGCGTCCGGTCGGCACTGTCGACGACGGG 874997 29 96.6 32 ............................G CAATGGCAGCGGGTAGTGAAGTCGGGGGTTGA 874936 29 96.6 32 ......................G...... GCGTCCGAGTGGGCGCGCCTCGACTCGGATTT 874875 29 93.1 32 ............C...............G CGTTGGTGGTGTCCTTCCTTGAGGGTGTTGTG 874814 29 89.7 46 ...............A.........G..G CGGGGATGATCCGCAGGTCATCGGCGCGCTGGTCGGTGGTGTCAAC 874739 28 86.2 82 ............C.........C..-..T GCGGGGAGCACCCGCGGGGATGACCCCGGGCCGCGCCGCTCCTGGCTGGTAGGGAGGACGACCCGCTAGACTGCAGACACTG 874629 29 93.1 32 ............C...............G CGTCACGCTTGGACGACTTTGATCCGGCATGT 874568 28 93.1 0 ...........-................T | C [874554] ========== ====== ====== ====== ============================= ================================================================================== ================== 15 29 95.4 37 GTGCTCCCCGCGTGAGCGGGGATGATCCC # Left flank : GCACCGGAAGACGGGGTTGACCAGGTTCCCGGCGGCCCTTCGCGACGGGAGGCTCCGTGATCACCGTGGTGTTGACGTCTCCTCCGGAGCGGGTGCGTGGTCACCTCACGCGATGGCTCTCGGAAGTGGCGACCGGAGTGTATGTCGGCAAGGTGAGTGCCAGAGTGCGGGACGAGCTGTGGCAGATGATCCAGGTGAACATGGACGGCGGTCGGGCGGTGATGACGTACCCGACCACCATCTGCGAGCAGGGGTACGCCGTGAAGGTTCACAAACCGCAGTGGGAACCGGTTGATGTCGAGGGCCTGGTCCTGTTTCGTCGGCCGGGCCGTGACCGGACGTCGCGGACCCGCGGCGATTGGTCACGGGCCTCGCGGGAGCGCGACGGCAGGACCAGACGAGCGGATGATCTGCAGTGATGGTTGGTGCTGACGTGAGGGCGCTGATCGACATTGAATGAAATCTGGCTTCTCGTGTACTAACATCCCTGGTCAGGAAGT # Right flank : CACCACCACCGCCCACCCACCTCCCGTCGTGTTCGCCCGTCCGCCGACCGCAGGTCTAAGGTGAATCCGTGGCCACGCGAACGACGACGAACAATGCCGCGCCCGGGTCAACCCGGCGCCGGCGGGGCTGGCGAGCGTTCCTCACGCCGGGCTGGGTCATCACCGCCGTCATCGTGGTGATGTTCGCCTACGTGGCGTTCACCGTCCTCGCGCCGTGGCAGCTGGGGAAGAACACCCGCACGCAGGAGAACAACCAGCGCCTGTCCGCCGCGATGGACGCCGACCCGGTGCCGGTCGAGGACGTCCTCCCCGCGGACGGCTCACCCGCCGGCGCGGACCGCGAGTGGACCCGCGTGACCCTCCAGGGCCGCTTCATCCCGGACGCCCAGGTGCTCCTGCGCAACCGCCCGGTGGACACGAGCCCCGCGTTCCAGGTCCTCACCGCGTTCCGCCTGGATTCGGGCGGCACGGTCCTCGTCAACCGGGGCTGGACGCCGCCG # Questionable array : NO Score: 5.28 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:-0.25, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGATCCC # Alternate repeat : GTGCTCCCCGCGCGAGCGGGGATGATCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //