Array 1 329781-330229 **** Predicted by CRISPRDetect 2.4 *** >NZ_VJZI01000005.1 Raoultella sp. Lac2 NODE_5_length_503443_cov_108.501510, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 329781 28 100.0 32 ............................ AGGACGGAACGCTCTACGGCTTCAACGACGAG 329841 28 100.0 33 ............................ GGGAACTTTAACCGGGGCAGGACATACCCACTT 329902 28 100.0 32 ............................ TCCTTACGACGTTGCTCCTTTGCCCTTTGCCG 329962 28 100.0 32 ............................ GTGCTGCACATTTTGAACAGGTTGCAGGGGAT 330022 28 100.0 32 ............................ AGAAACTGTATGGGTGCCAGCCTGGAGCATGT 330082 28 100.0 32 ............................ ATACCCAACCCCATAGCACGGCCCTCTCTGGT 330142 28 100.0 32 ............................ ATGCTCGCAGCCGCCCCGCAGGAGGTGAATAG 330202 28 85.7 0 .....................C.G.G.C | ========== ====== ====== ====== ============================ ================================= ================== 8 28 98.2 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TTTGCCAGCGCCGCTCTAGCAGTGCTCCGGCCATGCAACGGGCGCGCTTAACGGTCGGCGGACTGGGCAAACTCTCGCGCCAGCGCCAGAAATGCGGCCAGCCCGGCGGAGGGGTGGCGTCTGCCGGGTGTCCCTGGTGATTCCAGCGCCCGCCGTGCTGGTTGGCTCCGCTTCCCGTCCAGGTTTCGCTGGCGTAACGGCCGGTCACCAGACGATAGAAAATCATGCAAAAGTTCCCGCCTTTCAGGCAGCTAACACGTCTCAATAACGACATTTGTCATGTTTCATTTTAGTCATTTGTCGGGTTGTTGAGGGGGTAATCGCGGGCACGGTTGCCAGGGAGGCAGGATTATGCAGTTGACTACGGAGACCTTTTTATTTGTTATTTTTGTAAGCTATTGATTTTCATTAAGAGTAATGACAGCTTTGAAAAAAGGGTGAGATGAGTAAATTTGAGGTTTTTTATATATAAAACAAAGAAGTGAGTTGATATTATTTCA # Right flank : CGCATTAACTCGCTGATTATCAGAATAAATTGTGCCATTCATTTCTGGACGATAAACTGGAAAATCAGGCACGGCCGAAAATAGTGATTCGAGAGGACCGACCGCTGGACGGTCCGCCATTTTCGCTTTATCAGCCCGCCATTCAGCTTCTACTGCTGCAACACCTCAGCAAATTTCGCCAGCCATTGCGGATGCGCGGGCCACGCAGGTGCGGTGACCAGGTTGCCGTCGACATGCGCCTGATCGATACCTATTTCAGCATAATGCCCGCCGCTGAGCCGCACTTCCGGCGCGCAGGCCGGATAAGCGCTACAGGTCCGGCCTTTCAGTATTCCTGCGGCGGCCAGCAGCTGCGGGCCATGGCAGACGGCGGCAATGGGTTTGTGCGCGGCGTCGAAGGCCTGTACCAGTTTGAGCACCTCATCGTTCAGGCGCAGATATTCCGGCGCTCGTCCACCGGGGATCAGCAGGGCGTCATAATCCTGTTCTTTTACTGCCGC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 383718-384886 **** Predicted by CRISPRDetect 2.4 *** >NZ_VJZI01000005.1 Raoultella sp. Lac2 NODE_5_length_503443_cov_108.501510, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 383718 28 100.0 32 ............................ AGGACCTGTGAAGAGGTGGTGTTAGCGGTGGT 383778 28 100.0 32 ............................ GGGATCCCGTTTTCCCGGTACACCTGCTCCAT 383838 28 100.0 32 ............................ CGTAACGTCCGGTGATTCCGGCACTGGTATTG 383898 28 100.0 32 ............................ ATGCTGGCGCTTATTGCTGCCGGGGCCTCATC 383958 28 100.0 32 ............................ GGTAATGGCCGGCATCCCACTGAGCAGACGTG 384018 28 100.0 32 ............................ GGGAAAGCCCCGTTCGCGATGTAGCCATTAAA 384078 28 100.0 32 ............................ ATCGCCGGGAAGGCTGAGGGGTGAACTCCATC 384138 28 100.0 32 ............................ TACGATGGTCACCACGCCGAACTCCGGCATTC 384198 28 100.0 32 ............................ TGTGAAAGTGATGACTGAAAAAGCGGCTGGTG 384258 28 100.0 32 ............................ TGCACCGCGCCGCTACCGGCATTAAGGTTAAC 384318 28 100.0 32 ............................ TGCATATTGACCACAGGGGCGGCGGTACCAGT 384378 28 100.0 32 ............................ TAAGCCAAACATCCCCCCGGTGGCCTTCTCCG 384438 28 100.0 32 ............................ ATATCCAGCCCGGTACCTGATGATGTGCCTCC 384498 28 100.0 32 ............................ AGCAGGCGGCATATGCGCAGGGGTAAATATGA 384558 28 100.0 32 ............................ TTCGAGATAAACCTCTGAGCCTTTCCGTAAAT 384618 28 100.0 33 ............................ ACTCAGCACACCACCCATCACCCTTACCGCGAT 384679 28 100.0 32 ............................ TTGTGCAAACGTACGAACGCGTACCTATTATC 384739 28 100.0 32 ............................ AAAACCATTTCAGGAGGCAACCATGACTAATC 384799 28 100.0 32 ............................ TCGTGTTCCTTGTTGACGGCTTCCAGCATGCC 384859 28 96.4 0 ............G............... | ========== ====== ====== ====== ============================ ================================= ================== 20 28 99.8 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AGCGTGCTACCCGCTCACTTTCATCGGGAGTGAGGGTTCGCCCCGCACTTTTGCGACGAGCAACGTTGCGCTCATTAATGCCCGTTACGCGAAGAATGTCCGCTTTAGACATCTCGGTCCATTCATGAATATTATCGAGTACGCTGACCGGTAGCCCCTGATTGAGAAATTCGATCAGCCGTATTCCCCGATTTGCAGGCAAACCGGCATAGCGCCAGAGCGCGTTGTCAGCAGGCTTCTGCTCGGGAACCCATGTTCTCATTTTTCATCTCCTGCTTTCTGTCATTTGTCATGGTTAAGTATAGTCATTTGTCTGGTATTTGGCAGGGCGATTTTTTGACGAGTCGTACATCCCTGGCAGATGCCGGAGACCCTTTTTTAATGTTTATTTCTAATTGTTTGATTTTAAATATTATTTTTTACAGGCTGAAAAAAGGGGGTGAAGCGTAATTATATGAGGTTATTTCGTGAAATCAGTAAATTATGGAGATATTATGTCA # Right flank : ATGACATGTCCTGAACAATTTCAAAGACCTGATGTAGGGGCAAAAAACTACGGGCGTCAAAAAAACCGGCAACCCTTATCAGGACACAATCTCACTGCTGTTTTTAAACCGTGTCGGGACTTACTGAGATAAAGTGATTTGAACAGTTCAGTATCTGAAAGAGTATCGAATAACGATTCGCTCATCGTCGGTTCTGAATGAACTTAAATGCCGTGGAACAGGCTGGAATTCTATGGGGTTTACCAGAAAGAGAACGTATGAAAACTTCACACCGTTCGATAACCGACAGACTGTTGCTGATGTCTGCGGAATAAAGAATGGTGCGTCCGAGTGGACTCGAACCACCGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTACGGACGCATTATGGTGCGTTTAATTGGACTCGAACCAACGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTATAAACGCATTATGGTGCGTTCAATTGGACTC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //