Array 1 1237205-1240468 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP065233.1 Alteromonas sp. B31-7 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1237205 29 100.0 32 ............................. AGCCAGGCAATCTGGATGGCGCGTTAGATGAA 1237266 29 100.0 32 ............................. ATGAAGCGAGAGAGGAAGAGCTACAGAAAGAA 1237327 29 100.0 32 ............................. CCTACAACAGTATGGTTGGTATACCTATTGTA 1237388 29 100.0 32 ............................. TTAGCTATATTGGACTATGAACTTTATTTCCA 1237449 29 100.0 32 ............................. GGATTCAGGTACCCATTGCTGAATATTTTCTG 1237510 29 100.0 32 ............................. CAGCAATAAATGCAGGGCAAGAACCGAGTGTT 1237571 29 100.0 32 ............................. TACATGGGAATGGACAGATAATGCAGCATTAA 1237632 29 100.0 32 ............................. CGTATATGCGCGTAAACCCAGATAACAATGGC 1237693 29 100.0 32 ............................. GTTGAGTTGGACTTTCTCGCTACTGGGTTAGG 1237754 29 100.0 32 ............................. TCGCAGGAAATATCCCTATATACCCCGATTTA 1237815 29 100.0 32 ............................. GCGTTTTTATCGCGAGTGTTTCGCTGGGCATA 1237876 29 100.0 32 ............................. CGTTAAAAGTGATGCTCGCCCCTGGTTATTGC 1237937 29 100.0 32 ............................. TTACGCGGCTGTCTATAAACAACGTTGCCGAA 1237998 29 100.0 32 ............................. GCTAAATCGGAGGTTACAACATAGGCTGACTC 1238059 29 100.0 32 ............................. CCATCTGAGGTTAGCGCTTTAATGGCACCACC 1238120 29 100.0 32 ............................. CAGTAGTGACCGGCCAAGCGGCCAAGAAAGCG 1238181 29 100.0 32 ............................. TCAGGTGGAGCTAAAACCCATCAAGCCGACGA 1238242 29 100.0 32 ............................. TCTTCACAATCGCCGCGAAACGGCTTGTCTAT 1238303 29 100.0 32 ............................. CTTAATTCCGCTGCCAAAATCCGAAGGCTGGC 1238364 29 100.0 32 ............................. CATACGCTAACGTTAATACCACTATCTCTAGC 1238425 29 100.0 32 ............................. ATGGAACTACGTATTTGGGGGGAGGCCTTACA 1238486 29 100.0 32 ............................. GGTTTTCACTCCGCATTCCCCTGAAACTTGAC 1238547 29 100.0 32 ............................. CGAGGGCGGCATAAGTGGCACCAAGGCGCAGG 1238608 29 100.0 32 ............................. AGGGGAGGCGTATATTTAAACCATACCAAGAC 1238669 29 100.0 32 ............................. AACGGCGGTGGAGATATCCGTCTTTGTGAAAA 1238730 29 100.0 32 ............................. GTAGAAACTGTGCTTCGCAAAATCAAATGGCC 1238791 29 100.0 32 ............................. TGCCAGCAGAAAAATCCCCGGCGTCAACGTAC 1238852 29 100.0 32 ............................. TATCGACCCAGAAATTATATCTCGTATCCAAT 1238913 29 100.0 32 ............................. TTTTTACTTCAACGGTCATTGGTTTGTTATTC 1238974 29 100.0 32 ............................. CCCATGTCGCCTTTAAAGAAAAGCAGAATCCC 1239035 29 100.0 32 ............................. TTGAAAATATTGATGAGGAGAGTCGTGTTGTC 1239096 29 100.0 32 ............................. CAGTTACAGGAGCTTACACGGGGCGATCAGAG 1239157 29 100.0 32 ............................. GGGGTGAGTGATGCATCATTTACAAGCAAAAG 1239218 29 100.0 32 ............................. GGCGGCGTTATACTGTCAGAGCCTGAAAACGG 1239279 29 100.0 33 ............................. CTATACAAGTAGCTCCGGGCCTATTCCCCTTGC 1239341 29 100.0 32 ............................. TAATGCAAGCATTAAAGGGGAATTTTGGAAGA 1239402 29 100.0 32 ............................. AAACAACGGCTGAAATTTTTGATGACACGGTG 1239463 29 100.0 32 ............................. CATGTACTCTTTGATGGCATTGAAATAACTGT 1239524 29 100.0 32 ............................. CTTCTACCACTTGCCCAGCATGACCACGCATA 1239585 29 100.0 32 ............................. GTTGTTGGGGCATATCTGGAGGATTACTTAGC 1239646 29 100.0 32 ............................. CTTATCTTCTATTTTTGGTATATGTCGGCCAG 1239707 29 100.0 32 ............................. GGTTTAGCTCGAAACATTACGAGCATGAAATC 1239768 29 100.0 32 ............................. CGATTGAGGCATTGGAGTTGAGAGAGCTATGA 1239829 29 100.0 32 ............................. AGGGTAAGATCACGCACTTGCTACGCTGGGGC 1239890 29 100.0 32 ............................. TTCAAAGCTCAGGAGGTTGGGCATAATGCTGG 1239951 29 100.0 32 ............................. TAAACGAAGGCAAAGACTGCTTTTTCACTGAA 1240012 29 100.0 32 ............................. AGTGGGTGCGAGTTCCCGCTGGGGAATTGAAG 1240073 29 100.0 32 ............................. CCATCTTGACGCAGCGAGAACTCGATAAACTG 1240134 29 100.0 32 ............................. GCACTAATCAAACCTCTGATTATTTCAATCAC 1240195 29 100.0 32 ............................. GCGCGGTTTTAGGTGTCCAATTACGCACCGTA 1240256 29 100.0 33 ............................. GTTTGTAGAGTGTGACCCTTCAGCTACTAACGG 1240318 29 100.0 32 ............................. GGCGCTAAGTGCGCCCAGTTTAAAGGTATGTT 1240379 29 100.0 32 ............................. AGGATGTATCTCGCTTGGCGAAACAGGGAGGG 1240440 29 96.6 0 .........................G... | ========== ====== ====== ====== ============================= ================================= ================== 54 29 99.9 32 GTGTTCCCCGTGCCCACGGGGATGAACCG # Left flank : TAATTGAAGAAATCCTAAGTGCTGGAGAGATTACTCCTCCAGCGGCCCCTAAGGATAGCCAACCTCCCGCGATACCCGAACCTACGAATATCGGAAACGAAGGGCATAGAACAGGGTAAGTATTATGGCAATGTTAACTGTAGTGACTGAAGCTGTGCCTCATAGACTAAGAGGCCGGCTTGCCGTTTGGTTGTTAGAAGTTAGAGCTGGCGTATACGTTGGAAATGTTTCAAGGCGGGTTCGGGAAATGATTTGGTTTCATATAACCGAGTTGGCTGATGAAGGGAATGTAGTAATGGCATGGTCTACCAATAATGAGTCTGGCTTTGAATTTCAAACTTTTGGTGAGAATAGACGAGAACCAATTGACGTTGATGGACTAAGGCTAGTTCGATTTTTACCTCTTGATTCTAACCAAAATTCTTAACTTTGTTCTTTAAAAAGTTGGTGTATTTTTAATTTTCAATATTCCTTTTATAGATCAATTGTCTATCATTAGA # Right flank : GCGGAATATGGAGGACTTTAAATACGGTATTTAGGGAGTTAAGGGTCAGAGTACATTATCGCTCAGACTGGCAATGTCCACTTCCCCTAAACTAAGACTGATTAAACTAGTGATGCCAAAAGCTTTGTAAAAGGCACAATATCTTGTTTGGCGCTGGCTACTTCCAACGCTTGCATATATTCATCTCGCCGCGTAACCGGCACAATTGTCCAAGGGTAGCCACCAGATGCCATCATTAGATTCATGATAAATTTCCCCATTCTCCCGTTACCATCAAAGTAAGGGACAACAGCTTGTTGCCCCATTATGCAGCGATGTTTATGCTCACCTGCGATTATCGCTTTCATCTGTTATGAATGATGTGTCCTAAAGATCACATAAAGCCCCAAAATGGTTACTCTAATAGGTTAAAAGGCACTTAACGTAACCAAAAGTGCACTTTATAGTGAAAGGTGTGACAGCTGCAGCATTAGCAGAAGAGATCGGCGACAGATTGAAGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTGCCCACGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGTGCCCACGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.30,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 3609011-3608383 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP065233.1 Alteromonas sp. B31-7 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3609010 28 100.0 32 ............................ GCAAAGTATAGCGAGCCAAAAATTAAGGCTGC 3608950 28 100.0 32 ............................ CAAAACCGATGTTAGAACCGCAATCGATAAGT 3608890 28 100.0 32 ............................ TAGAGTTCACCGGATGGATCCAAGGCAAGCAA 3608830 28 100.0 32 ............................ CAAAACCGATGTTAGAACCGCAATCGATAAGT 3608770 28 100.0 32 ............................ TAGGTCGATATTCAGTTCCGTATCGTTAGCCA 3608710 28 100.0 32 ............................ ATCACCGGAGGTTGGCGCTAAAGTTGTTCAAC 3608650 28 100.0 32 ............................ CGTGACAGTGAGATGGCTATTCGGCGTGAAGT 3608590 28 100.0 32 ............................ GATGGGTGGACGGACGGCGAGCAGTGGGATGA 3608530 28 100.0 32 ............................ CTCCCAATCAACATAGCCCGACATGTGGCATC 3608470 28 100.0 32 ............................ AATAAGCAGTGGTATCGGTTAGAAATAACAGA 3608410 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 11 28 100.0 32 GTTCATGGCCGCACAGGCCACTTAGAAA # Left flank : ATATTATTAAGTGGCTTCGTCGCCTATCTGACTATGTTCATGTTAAAGAGATCGCGCTTGTTCCCGAAGCTGATAGCTATGAAAGCTTTTCTCGAGAGAATACAAAGGGCTCATTGGAGAAGCACATCCGAAGAAGGATGAAAAGGCACGAAGAGACCTATGAGCAAGCTTTATCGAACTATGAAGGCTATGAACAGGACGACGTTAAATCACGAGTCCCCTTTATCAAACTTAAAAGCTTGACCAGCGGGAATGAGTTCTGTTTAAACATTGATAGGAAGCGTGTTGTTGACAACACTGTTGAGCTGCAAGATCACCAGCGATTCAACACCTATGGATTAAACCGAACGGCTATTTTACCCAAATTTTGACTAATAAATTTCGCTCTTTAAAATTAAGTGAAAATAACAATGCGTTAGAGGTGCCAAGAAATAATTGGTATTTCCATTAGATTTACTCTAACGCATTTATACACATCATTTTTTTGAGCAAATTTTACG # Right flank : TACATGGAGGTAGCATCTCTTTAATGCTTTGTGCACCAATGATAATTTAAGTTAAGTGTATAGGCTCTTCATCATTAACGGGGGACATCCGCATTCATTAAACTGATTTTGCGAAGAATCATTTAATGGAGAGTACAGATGTCCCACGCAGGTACTATTTTAGGCATAAGTGAGTTAGAAATAGAACGTGTTCATCGACATGATTTTATTGAAGTGTGGGCGAAGCCTACTAAAAAGCCTCTATGCAAGCATTGTGAGAGTCGACATTTACGCATAAAAGCCACACATAAGCGCACTGTAAAGCACACGCGTCAAGGTAATCAGGTGCTAACGCTACATTTAAAGGTGCCTAAGTATCATTGTCGATGCTGTGGTCGTTATTTCAGGCATCCTTTTGTTGGGATTCGGCCTCGCTATCGGGCATCAGAGTGCTTTCGCTTGGAAGTCTTTGAGGCGCACCACGGCGGTGTTACGCAGCGTGGCATCTCACGCACACATCG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCCGCACAGGCCACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.90,-8.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.74 Confidence: HIGH] # Array family : NA //