Array 1 566831-566497 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI515728.1 Corynebacterium sp. KPL1859 addTU-supercont1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 566830 29 96.6 32 ............................C TAATGCGTGAATTTAAGACCCGTAAGCCCTCC 566769 29 96.6 32 .....T....................... ATGCGTGAGGTTCGCTTCCCACGGCCCATACA 566708 29 100.0 32 ............................. AGAGCAACACCAGAAAAGGAAACAACAATGAC 566647 29 100.0 32 ............................. TAGCCAGCATGTTGGTTAAGCCACTACAGGCA 566586 29 96.6 32 ............................C GGGCTAGGAATCTCGCTTTTTCTCAATAACAC 566525 29 79.3 0 .......T...............A.ATTT | ========== ====== ====== ====== ============================= ================================ ================== 6 29 94.8 32 GTGCTCCCCGCGTGAGCGGGGATGAGCCG # Left flank : AACTCATATCTGCCGTCGTGTATGAGTGCTCCCCGCGTGAGCGGGGATGAGCCGGCAGCAGGGCAGAATTATCTGCCTTATTCACAGTGCTCCCCGCGTGAGCGGGGATGAGCCCCCCAACTGGCGGTTTAGCTCAATATTCTCACTGTGCTCCCCGCGTGAGCGGGGATGAGCCCTACATGGCTCACGAAATCACCCTGCCCGAAGCGTGCTCCCCGCGTGAGCGGGGATGAGCCCACCATAAATGTGGGGGATCCGCACCAGTCAGAGTGCTCCCCGTGTGAGCGGGGATGAGCCCAAACCACCCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTTC # Right flank : TTTTGATTTAATGCCTAAAATTTCCTGCTAACCCAATAATCAACAAATCGAAAGGAGATCTAGCAACGACGATCAGCACTTCGGTTATGAGGGCAGAATTCAACTTCACTGAGGCTCTAACGTGGGATCCAGTCGCAGCACGGACATCCACGGTTGGGCGTCGCGCACTCAACTGGGGTTATTTTATGAGGGGCCGTGAATTGGTCTTTCGTGAGCTATTGACTAATCTTTTGGGAGCGGAGTGTCGTATTTTGCGACATGACTTCCGTGTGGGGCTATAGCTCAGTCGGTTAGAGCTCCGGACTCATAATCCGTCGGTCCCGGGTTCGAGCCCCGGTGGCCCCACGGTAGAAGGAGGCGTCGGCAAGCAATGCTGGCGCCTCCTTTTTAGTATTCGGTGTGCACGCGCTCGGAGAAAATCGGCCTGGCGGTCAGCTCGATGCGGGTGCCGATATTTGCGTCGTCTGGGTTTCTGCAGTGGACGGATTTTTGATTCGTGG # Questionable array : NO Score: 5.70 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-5.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 568160-567033 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI515728.1 Corynebacterium sp. KPL1859 addTU-supercont1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 568159 29 96.6 32 ............................T AGACGCTGCGATATGGAAGAAATTATGACGTA 568098 29 100.0 32 ............................. GCCCGCCACCTCATCGAAAACAAGTACTTCAC 568037 29 100.0 32 ............................. ATTCTTCCCCTCCTCCGTGGTGTACGGGTTCA 567976 29 100.0 32 ............................. GGGTTCGGCCCAGCCCAATCGTCCACATCGTC 567915 29 96.6 32 ............................T TGTCAACATGTTTAGATTTATTTTGATAATTC 567854 29 100.0 32 ............................. TCGTCCAAATTCTGGGGGGCCGATGGGGCGGT 567793 29 96.6 32 ............................G AAGGCGGAGACAAACGAATCTGCTGGTATCCG 567732 29 96.6 32 ............................A CCGGCGTGTAGCCGTATCCGAATACAGCGGCG 567671 29 100.0 32 ............................. AGGAATATTACAAGGAAGTGATTACAACCATG 567610 29 100.0 32 ............................. CGCGAGCAGGCAATGTTCGCCATGACCTTATT 567549 29 100.0 32 ............................. TGGGGTTCGGGTTGCCGTTTCCGTCGTGGCCG 567488 29 96.6 32 ............................T ATTACCGTCCTGATGCAGGGTTAGCAACTTTG 567427 29 100.0 32 ............................. TATGCGCATCGGTGGCAGATATCGAGGCCCCC 567366 29 93.1 32 .......T....................G GAATACAAACTCATATCTGCCGTCGTGTATGA 567305 29 96.6 32 ............................G GCAGCAGGGCAGAATTATCTGCCTTATTCACA 567244 29 100.0 32 ............................. CCCAACTGGCGGTTTAGCTCAATATTCTCACT 567183 29 100.0 32 ............................. TACATGGCTCACGAAATCACCCTGCCCGAAGC 567122 29 100.0 32 ............................. ACCATAAATGTGGGGGATCCGCACCAGTCAGA 567061 29 96.6 0 ..........T.................. | ========== ====== ====== ====== ============================= ================================ ================== 19 29 98.4 32 GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Left flank : TGAACTTGAAGTCATTGCTTCGGGTCTTAACTGGGCAGAAGAGGAAACGCTGTCATGATGGTGCTGGTTATTACTGCTTGTCCCGCTGGACTACGCGGCGATCTGTCTAAGTGGCTCATCGAGCTGACTCCCGGTGTGTTCGTCGGACGTCCCTCTGCTCGTATACGAGATTTGCTCTGGGATCGTACAACCGAGCTTTGCAAAGATGGCCGCGCACTTTTGGTGTATTCAGCCGCGAATGAGCAGGGAATGGAGTTCAAGACTCACAGACATCATTGGGAACCTACGGATTTCGACGGGATTACCTTGATGACGCGACCGACTAAGTCTAAGCAACCACAGCGAAGGACTGGATGGTCTCAAGCCCGACGCAACCGTATTTCTTATAAGAAACAGAAGGGAGGATATTAGGCCGCGTGGAGCTTCGAGAGTAGCTTTCCCCAAAATACAAGTCGTATGTAAAATACGGTTAAGGCTCGAATTTCTGCTGTTCAGCAAGT # Right flank : AAACCACCCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTTCGTGCTCCCCGCGTGAGCGGGGATGAGCCCTAATGCGTGAATTTAAGACCCGTAAGCCCTCCGTGCTTCCCGCGTGAGCGGGGATGAGCCGATGCGTGAGGTTCGCTTCCCACGGCCCATACAGTGCTCCCCGCGTGAGCGGGGATGAGCCGAGAGCAACACCAGAAAAGGAAACAACAATGACGTGCTCCCCGCGTGAGCGGGGATGAGCCGTAGCCAGCATGTTGGTTAAGCCACTACAGGCAGTGCTCCCCGCGTGAGCGGGGATGAGCCCGGGCTAGGAATCTCGCTTTTTCTCA # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [8.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //