Array 1 1722450-1724133 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP076000.1 Clostridium perfringens strain AAD 1527a chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1722450 36 86.1 30 A...C.TA..A......................... TTATCATCTGAAGGTAAGGGATTGGTATTT A,A [1722452,1722462] 1722518 36 100.0 30 .................................... GCATGGATTAGATTATCCAAACTTTTATGA 1722584 36 100.0 30 .................................... AAAAATCCGTAGTTATAGTCATGTTTATCT 1722650 36 100.0 30 .................................... CAGAAATGTTAAAGCATGATGTGACTGAAA 1722716 36 100.0 30 .................................... TTAGCCAAATAAGGCATTTTAGCTATGTTA 1722782 36 100.0 29 .................................... TTTGTCTGATTATCGTATTAAACCTTATG 1722847 36 100.0 29 .................................... TTTGTCTGATTATCGTATTAAACCTTATG 1722912 36 100.0 30 .................................... TACTGTAGATTCTTTGAAAAATACTGTTGG 1722978 36 100.0 30 .................................... TTGGACACCATTTTAGATATTAAATCATAT 1723044 36 100.0 30 .................................... GGAATATTAAAAGGAGCATTTCAAAGGAAC 1723110 36 100.0 30 .................................... TTCAACAGTATTTTCTGCAATAGTTAAGGC 1723176 36 100.0 30 .................................... TCTATAGTATCTTTATAACTATCCTCTATA 1723242 36 100.0 30 .................................... ACAAATAACGTAATTATATTCATTGAAGAG 1723308 36 100.0 30 .................................... AAGAATTGAATTCTAAATTCAATCTTCAAA 1723374 36 100.0 29 .................................... TATTACTTTGTGTATCAGAATAAAGTCCA 1723439 36 100.0 30 .................................... TAAAACTGAGGTATATTCTTTACTGCAATT 1723505 36 100.0 30 .................................... ATATGGAAGTGCATTAGATCAGTTGAAGGC 1723571 36 100.0 29 .................................... ATAGAATAATGAAGTGAACTCAAAGAAAT 1723636 36 100.0 30 .................................... CACTATAGCAACAAGTGCTATCAAGCAATT 1723702 36 100.0 30 .................................... AAAATCAAATGATTAGAGTTATTTCTACTG 1723768 36 100.0 30 .................................... AAAGCATTGTAACAGCATATACGGCGAAGC 1723834 36 100.0 30 .................................... TCATAAGGTAGTATAGTATAATATTAAATT 1723900 36 100.0 30 .................................... AACCTCATAATATATTTCTTAAACATTTTA 1723966 36 100.0 30 .................................... GTTTATGTAGGTGATTAGATGCTGGATAGA 1724032 36 100.0 30 .................................... TACGGAGCTCAAGTGAGCTATAAGCTAAAG 1724098 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 26 36 99.5 30 GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT # Left flank : AGTTTCTAAAAGCAGCAAGTCTATCCTTATTTTTAAAGAAAGTATTGTAAAAAGTAAATGCTTCCTTAAGATAAGGATTATTAACTTTCAATTCTCTCATAATAACAGTAGCCCTATCTGTAGAAAATTCCTCACTATAAGATAAAATATCATAAAGCCAATCTTCCTGTGGTTTAGGTTTTTTCATATTAGAATAAACTAGAATATTTCCATCTACATTTTCTTTTTCTATATAATATTTAGTATAAAAAGCATTGTTCTCATTTAACTTAATAAGCTCAACACCATCTAAATCAAATTCATCTATCTCTTCAGTAAAATCCTCATTCTCATCATACCAAAAAACAATATGACGTACTTTTCCATCACTTAATGGCTTTGAAAAAATATCATTAAGGAAATTCTTAATTTCTTTTAAGTTCATTTGTCACCTCTAAATAAAAATTTATAAATATTTTTTAAATTAATATATAATAATATAATAACTTAAAAGTAATAAA # Right flank : TAGGAACTAATGAACCCCTTGAAACAACTAATTTCAAGGGGTTTTTACTTTCTAAAAAACATTCAATTGTCGTGAATTTATCTTCTTTTCCTGCTTTTTTGGTGATCCTACTAAGAATTTCATTTCTGTATATTGCTTTTCTGTAATCTGAAGATATCTTACTGATCCTTTTGGTGGTAAATTTTCTTTTAGTCTTGCTACATGTTTATTTACTCCATCAATACCATTACATATTCTTGAGTAAACAGAAAACTGAATCATTAAGTACCCATCATTTAATAAAAATCTTCTAAAATTTTGATATTCTCTTCTATCTTCTTTTTCAACAACTGGCAAATCAAAAAATACAAGTATTCTCATAAACTTTTTACTCATAATAATGATATTCCAAAGGTTTTATCTCTGGCAATTTTAATAATCTAAAATCTTTTTTACTACAAGCTGTTGTATAAGAAGATATCATTTTATCAATTCCATTTAAAACAGAATGATTTTTTCCA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [96.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //