Array 1 325023-325930 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFUD010000002.1 Enterococcus sp. S22(2020) NODE_2_length_609715_cov_69.973999, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 325023 33 100.0 34 ................................. TAGCCGAACCATAACCAATAGTAATAACACCAAC 325090 33 100.0 34 ................................. ATAGGATTAGATGTTCCATTGTTATGCCAAAATC 325157 33 100.0 34 ................................. TTCAAAATCCACAATGCCAGCTCTACGCCGTTGA 325224 33 100.0 34 ................................. AATAGACATTGGTTCAATGAGGGATACGCTCGAT 325291 33 100.0 33 ................................. TCGTATAGGTTTAGCTACTCTAGTAAACACTTG 325357 33 100.0 37 ................................. ATTCAGATGGAACAGACGGAATCAGTCATACTTTAGC 325427 33 100.0 33 ................................. ATTTCTTTCTATTGATATAGTAGTATCTACGTC 325493 33 100.0 34 ................................. AACTAGTTAATGAAACGATGTCATTTAAAAGTAA 325560 33 100.0 35 ................................. ATTACAACAAAAATCATGTCGATTGCTCAAATTTT 325628 33 100.0 34 ................................. AAGACCAACACCACAATCACAAATCTTACAAACG 325695 33 100.0 36 ................................. AAATGATCGATGTTGTCAAAATTGATTCTACCGGTA 325764 33 100.0 36 ................................. CAATCAATTTCAGGAGATTCAAGATGCTGCTGTCGG 325833 33 100.0 33 ................................. AAGATGAGATAGAAGCAAAAAAAGAAAAGTATT 325899 32 78.8 0 ......................AC.-..C.TTC | ========== ====== ====== ====== ================================= ===================================== ================== 14 33 98.5 34 GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT # Left flank : CGCCATTTTTATGGAAGTAGGTGAAAAGAATGTTAGTATTGATCACTTATGATGTAGCTACAAGTTCAAAAAATGGTCCTAAACGGTTGCGTAAGGTAGCGAAAAAATGCCAAGATTATGGACAACGTGTACAAAACTCTGTTTTTGAATGTGTCGTTGATGCGACAGAGTTGACTAGGTTGAAAAAGGAATTGATTGATCTGATTGATGAGGAAGTAGATAGTTTACGGATTTATCGTTTAGGGAATAATTATCAGACCAAGGTAGAGCATGTTGGTGCAAAAGAAAGTTTTGATGTAGAAGCACCGCTGATTTTTTAATATAGAATTTCGGTGCGAATCCTAAGTGCACATAAAAATACTAGAGGACTCGCACCAAAATTTGGGTTATTTGAGTATGAAAAATGTAGTTTTTCTAATTGAATTTTAATTTTATTTTGAATTAGACGTTTTTTTAGTGGATTAGTTGAGAATAGTATACTTATTTTGACTAAATTCACA # Right flank : CCTAAATTCCTTTATAAAAACTCGAAGTCCAGTAGGTCATGATTGACCTTACTTTCACTCCATACTACAAATCTAAGAAGGGAAAATAATAGAGGGTAAAGTCATCGACGGAGGACTTTACCCTCTATTATTAGTATGTTGTATTGAATATTTCTAATCAAATTCATAGAAAAAATAGGAATAACTTGTTGTGGATAAGAACAATGGTATACTGCTAATGAGGTGAAATTCATGATCATCAGAGAAATTCTAGAAAAAGACGACAAAGCAATCGAACAAATCATAAAAGAAACACTTGAATCTTTTGACCTAGCTATCGAGGGAACGGCATACTTTGATCGTGAACTAAGACATTTAAGTCACTATTATGCGCGTCAGCCGCATGCTGCTTATTGGGTAGCCGAAAAAGATGGAAAAATATTGGGCGGCTGTGGTATCGCTCCTTTTAACGTTGATGAGAGGATCTGTGAGCTTCAAAAGCTTTATTTGATACCAGAAGC # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.61%AT] # Reference repeat match prediction: F [matched GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.70,-5.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 122817-122175 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFUD010000001.1 Enterococcus sp. S22(2020) NODE_1_length_647617_cov_61.514383, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 122816 33 100.0 36 ................................. ATTATTACCAGTAACGATCATATCAAAAAGATCATA 122747 33 100.0 33 ................................. TGACCCAATAAAACAGTTGGGATTCAGTAGAAA 122681 33 100.0 34 ................................. ATTTATTGAATTGCCGGAACAAATTGCTCTCGAT 122614 33 100.0 33 ................................. AAACGTGCTGCGCTGCTCCTCTTTTTCCTTCGT 122548 33 100.0 35 ................................. TCCTTCTTAGATTTGTCTGTTAAACGCTCTATAAC 122480 33 100.0 35 ................................. GTATAATAATGGTACATTAAAAGGACGGTGTTTAT 122412 33 100.0 36 ................................. TCTGCACCACTCATCACAATCAACATTGTTTTAAGA 122343 33 100.0 35 ................................. ATCATTACTGATCAGCTCCAATGATTCCACTTTTT 122275 33 100.0 35 ................................. AGTACTTTGTCCAATGATCGACTAGGGATCTTCAA 122207 33 78.8 0 ......................AC.T..CTCC. | ========== ====== ====== ====== ================================= ==================================== ================== 10 33 97.9 35 GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT # Left flank : ACACGAAATATGGTGATGGTGGAGCAGATATCTTACCATTGTTCCGTTTGAACAAGCGACAAGGCAAAGCTCTGTTGAAAGAATTAGGTGCGCCAGCAGAACTTTATTTAAAAATCCCAACTGCAGATCTAGAAGACGATAAGCCGTTAGTAGCGGATGAAGTCGCTTTAGGTGTGACTTACGATGACATTGATGATTATGTGGAAGGCAAAGAGGTTTCTGCAAAAGCTAAAGAGACGATCGAGAACTGGTATAAAAAAACGCAACACAAACGCCATATGCCAATTACGATTTTTGATGATTTTTGGAAATAATAGTACATTGTAGTTTGTTTCGTGTTTGGTGCGAATCATAAGTGCACATGAAATCACTGAGCGATTCGCACCAAAAAATCGAGATAAATGGGTTGTAATTGCTCTTTTTCTCATGGGAATTTAATGTGAGAGGAGAATTTAAGGTGAATAATAGCGGATATGTAATGTATTTCTGCTTTATTCACA # Right flank : TTATGTTTATATATTATCTCAATTTTTTGAGTAGAAACTTCTCATGCATTCTCCTTATTTTTATGTTAAAGATTCCGGGAAATGAGATCTTAGTACTCCAACGTTTTTCTCCATTGAAGGACATCTGATTTTACTTTTATCAAAAACTATAGAGAGAAAAACATTTACAGATATTTTAATCAAGGCATCTGAAGTAGATTAACCCTAAATCTCAAAAAGTAGCTATCTTATAACGTATTATGGCACTTTCTACAAAAGTGTCCCGCTGAAACGAGAAAAATAGAAAGCTCGATTTATCGAAGTTTCTATCTTGTTATGGCAATAGACCAATGATCATTAGTATTCTTGATTTCTGAAAGTATTTAGGTTCAGAATATTTATCACGATAGATAACCATGCGAATTAAGTAATCCGTAAAAAGTTTCACTGCCAATAGAGTGAGGCTTTTTTTAGTTTCTATTTATTAATAACAAGAAATGAGATAAATAGTGGGAGCTGGA # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.61%AT] # Reference repeat match prediction: R [matched GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.70,-5.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 457986-457407 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFUD010000001.1 Enterococcus sp. S22(2020) NODE_1_length_647617_cov_61.514383, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== =================================== ================== 457985 34 100.0 34 .................................. TGTTTCTAAAACATTACCTTGTGTAAATGTCATG 457917 34 94.1 32 ................................TC AAATATCCGATGATGTACCTACTCCATATAAG 457851 34 97.1 35 .................................T AGACAAAAATACCTACTTATGGAGAATGTTAAAAG 457782 34 97.1 34 .................................G TGAACCTTACTCGCTAGAAAAGCATATTGTGAGG 457714 34 97.1 33 .................................G ACAAAGCAATTGAGTATATAGCTTTTATCAACG 457647 34 97.1 33 ................................T. CTGCAGATACGACTGGCGATAGTATGGAAGGCG 457580 34 100.0 32 .................................. TAAATTAGAAGCGCAAGACATGAATAAATTAG 457514 34 97.1 34 .................................T AGAATCATTGTTCAACGGCTAATAAACGTTAATG 457446 34 85.3 0 .........A.........G..TT.........T | TA,TTTA [457414,457422] ========== ====== ====== ====== ================================== =================================== ================== 9 34 96.1 34 TCTAGCTCTGTTTAGAGCTAGTGGATTGAAATAA # Left flank : ACGATTTGATTTCCTGCAAAAATCACGGGTAAAAGAAGAACAACAGTTATCTCTTGAATTTGAAGAACCACTTTTGGTCGCAGAAGAAAATTCAGAGATTTTTGAAGAGTATCCCCAAGTTGTTTGGCAAAAGCGAAATTTGGGAGAAGTCGTTCATGTTTTTAGCCATTTAAAATGGCATATCTTGGTGTTTTATGGAAGACAAACAGGTCCAATTTCTATCAATGACAATCAGAATTGGACAACTCCAGAAGAATTTTCAAACTATGTATTTCCAAAGCCGCAGCAAAAAATGGTAGAACTTTATCAAAAAGAATTTAAAATAAAGAAATAATTAGTTGGTGCGAACCTTAAGTGCGCATGAAATAGCTAGGAGATTCGCACCAAAATTTTTTAAGATTTCAGCTGTAAAAGGCTATTTTCTCATTTATATTTAATGTTATAATAGTGTTAGTAGTGGAATAGCTGGAATATGTCTGATATTTCAGCCTATTTCACAG # Right flank : AATAAACTAAAAGTTATTTAAACGTACTTTATAGTATTTCATTTAAAACAGTCGTAAGAAATCAAACTCCTTAGTATGCAAAGTTGAAAATTATGATATAATTATAGTGATATCGGTGTAATGAACACCCAAACGAAGCGCAATCAGCTTTGATATGCGATTTTTCGTACGAGGGAAAGTTGGGGGACTATGGCAATTCCAAAAGAAGGTGAATTTGTAACGATCCAAAGTTACAAACACGATGGACATTTGCATCGAACATGGCGAGATACTATGGTATTGAAAACAAGCGAGTATTCTTTGATCGGCGTTAACGATCATACTTTGGTGACAGAGTCTGATGGGCGTCGATGGGTTACTCGGGAACCAGCGATTGTTTATTTTCATAAAAAATACTGGTTCAACATAATAGCGATGATCAGAGAAAAGGGGGTTTCTTATTACTGCAATCTTGCGTCACCATATCTTTTAGATGATGAAGCATTGAAGTATATCGATTA # Questionable array : NO Score: 5.61 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.47, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCTAGCTCTGTTTAGAGCTAGTGGATTGAAATAA # Alternate repeat : GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAATT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.76%AT] # Reference repeat match prediction: R [matched TCTAGCTCTGTTTAGAGCTAGTGGATTGAAATAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.70,-5.70] Score: 0/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //