Array 1 1017175-1016480 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIFR01000001.1 Tengunoibacter tsumagoiensis strain Uno3 sequence1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 1017174 37 78.4 36 A..G.TCC.........A.....TC............ ATCACGAAAGCCGGTGAGAGTACCACTAGAACAGGT T [1017164] 1017100 37 94.6 37 .......................TC............ GACCTCAGCCAGCTCTCTGTTGACGACCTCCAATTCA 1017026 37 94.6 35 .......................TC............ TGGCGGATTTTAGTCACCGAGGATGGGGCCGTAAT 1016954 37 94.6 36 .......................TC............ ACCGTAGTTACTGCTAACGCTTCAGAGATGCATGTG 1016881 37 94.6 35 .......................TC............ AGCGTAGAACATTACAAGCTTCGGGTTCGCGACAA 1016809 37 100.0 37 ..................................... CCAATTATAGTCGGGATCGATCACTTTTCCTTGTGAA 1016735 37 100.0 36 ..................................... GTGGGCGGTAGAGCCCGTGGATTATGACCAATCGAT 1016662 37 100.0 37 ..................................... GTGATGGGAAAAAAACGGGTGGAATTCGGGTGTGGTT 1016588 37 100.0 35 ..................................... GGACATAACCCTGTAGAATTGTCTCTGATTAAGGG 1016516 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 10 37 95.7 36 GTTTCAAGCCCTTCTGGGTTCTCCTCTACATTGCTAC # Left flank : AAAGCAGCGCTGCACGGCGGTATCGCCGCTATTCCGAAGATGAAACATGGTGATACCGTCTTCGTCCCTGGAACTGCTGGCGTTCCCCTGTGTCCAAAAGGGTTGCAAATGCATCCAACCTATCAGTATGCTCATACCTACGGCTATCGAGCGCAATTGTATCGTTGTCCGCTCTCTTTTCCTTCTGTTGTAGAGAGAGCAACCTGCGATCATGCACAGTTTCCTGTTGCAAAAGGGTGTAAAAAAAGCGTCAATATCGAGCCTGGCGGGCTCATGCGCATCACACTCGATCGTACAACACCTCTGTATCGTGCTATTCACAACCAGCGGACCAGCTGCGAACGCATCAATAGTCAAGCGAAAGAGCTGGGAATTGAGCGACCAAAAGTGCGAAACGCACAATCCGTGAAAAATCTCAATACCCTGACCTATATAGTTATAAATGTACGTACTCTGAGTCGAGCTAAATCAACTAACAAGGGAATTCTACAAATGAATTA # Right flank : GGCAACTCTTCTAGTTTAGCATGAGAAGCCCCTTCAGTCAATCAAAAACGCGAATCTCTCAAAAACGGCAGTCAGGAGGTTCAATACTAAAATACTAAACTATGCTCCACTGGCCTCTCAAGCCGTGCGCGAACCTCGTGCTTAGCAGGCCAGAGCTACAGGTTCGCGCAATCCTTCTTTAGTGCTTGCGGTTCAGTCTGCATACAAGAAACCCTTTCAATTTTGAGCATCTAAGCAGGGTATTTATGAAGGATTTTGTATATAGCTGAATGTTAATACCAAGGGAGAAACAACGAGGGTGCTTCCAATTCTCGTAGAAGCAGAAGAGGGCATGAGCCAGGAAAGGGAAAAGAGGCGGGTGGGCAAGCTCAACGGACGCGACTGCGGTCGGGTCCATGTCTGGGGGGACAATAAATTGAGAAGAGGTCACTGATCAATTCATTGTGGTTGATGACACGGGCCCGACCGCAGTCGCGCCCGATAAATGATCTCATATCATT # Questionable array : NO Score: 2.97 # Score Detail : 1:0, 2:0, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAAGCCCTTCTGGGTTCTCCTCTACATTGCTAC # Alternate repeat : GTTTCAAGCCCTTCTGGGTTCTCTCCTACATTGCTAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.60,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 2 1018836-1019520 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIFR01000001.1 Tengunoibacter tsumagoiensis strain Uno3 sequence1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 1018836 37 94.6 36 .......A...........G................. ACAGGCTCGTGGTGGGATGTGAACGCTTCCGAGTTT 1018909 37 94.6 33 .......A...........G................. CTTGTCTCGCATGAAAGTGTGAGGCAGCCTCGT 1018979 37 97.3 35 ...........A......................... CGCTCTCGGGCCTCACCAAGAGCTGGATGATCCTC 1019051 37 94.6 34 .......A...........G................. TAAATGCTCGCTGAGCACTGTCGCATTCACCGTC 1019122 37 100.0 35 ..................................... TTCAGGGAAAAGCTTACTGGCATTAAATAGTGAAA 1019194 37 100.0 35 ..................................... TCTCTTTTGATCTTTAGAAGAGATACCATTCTACG 1019266 37 100.0 35 ..................................... ATATCTCCTACAATCACACGATAAGCATTTAAGGT 1019338 37 97.3 36 ...........A......................... CTTGCCCTTGCGAAGATACCAGCAGGCCGTTATGCC 1019411 37 94.6 36 ...........A........................T AATAGTAGGGGGTTGTTGGGTGCGGCTCGCTACTTC 1019484 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 10 37 97.3 35 GTAGCAATGTAGAGGAGAACCCAGAAGGGCTTGAAAC # Left flank : ATCATAGGTTGTTCTACCGGTCTTCCACGATGGGAGCATCGTTGAAGCCAACGATCAATGATGGACCAATCAAGCAAGGAAAAGAATGCTCGGTAGCGTTGGACAAGCGGGTCGGCCTGAAGGATGGAAATCAGAGTAGACTGGCCAAAAAGGGAAGATGCGGGTATCATAGAAAGAGACTCCTTTGCTGAGTTTGTTTTGGTTATGAATACTCTGCACAAGGAGCTCCCCTTTTGTCAAGCAAAAAGGACATTTGCAAAAAAAACGGAAGGTATTCAACTGCTGAATGAATTGCTCTCGTTTTTATGGAAACTGGTCTGGAACTGTGAATCGCAGGAACGCCAAAATTCTTGAAATGAATGAATTGCTCTCGTTTTTAGAGAATGGCTATCGATCAGAAATCGGGAAAAATGGCGTTTTCTACAAATGAATTAGCTTCCCCCCTCCCAGAAGGGCTTGAAACTTAAACATGGCAGTGCTGATATGTAGATACTCTGCTG # Right flank : CTCACTAAGAGCCTGTTCTGGAATGTGCGGCGGTAACTCTGCGTGGCAAGAAGAGTGAGATAGGAGAAGCTTTTGCGAGGTCTGACGGTAGAATGTTTTGTCTGCAATGAGGGAACGGAAGACCCTGGTGCGTGTGCGCAAGACTGGCAACGAGAGCTGCGCTATGAGAAACGCAGTCGTTGCGTCCCAGGGGAGTTCTGCTTCAGTCTCTCGCGAGAGGAGCCTGATCTGTTCCCATGAAATCGGTAAGGAGAACCACGTATGAAATTTCTGCTCACTTCTGCTGGCATCAAAAACGACAGCATTCGTAACGCTCTGGTTGATCTGCTGGGCAAACCCATTGCCGAGTCCAGCGCCCTCTGCATTCCTACTGCGGGGTACGGGCACCCCATGGGCAGTCCTGGTGGGGCATGGCGTTTCATCACTGGTCAGTCCTCCACACCCATGTGCGAGCTGGGTTGGAAGTCCCTGGGCGTGCTGGAACTTACCGCGCTGCCCAG # Questionable array : NO Score: 2.81 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGCAATGTAGAGGAGAACCCAGAAGGGCTTGAAAC # Alternate repeat : GTAGCAAAGTAGAGGAGAAGCCAGAAGGGCTTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.60,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 3 2692443-2693736 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIFR01000001.1 Tengunoibacter tsumagoiensis strain Uno3 sequence1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 2692443 37 91.9 38 ....................GGT.............. ATGCATTGCTTGTAGATGCATATGGCTCTAATGAACAA 2692518 37 91.9 37 ....................GGT.............. CATGGGGAACACAGATAGCGGGTGGAAACCAATAGTG 2692592 37 100.0 37 ..................................... TTTGTCGATCATCAACACCATACGGTTTATAAACCTA 2692666 37 100.0 39 ..................................... ACGAACCCGGACAAGCGGAAATAGCACGTCTTGTAGGGT 2692742 37 100.0 38 ..................................... AATAGTTGGCACTGGATTGAGGCATAATCATGCTTCCT 2692817 37 100.0 36 ..................................... ACGCGAATCTTCCACCTCAACGGGAGCAGGGAACAG 2692890 37 100.0 34 ..................................... TTGTCGTAAATGGCGTTCAGGCGAGCCTTGCGGT 2692961 37 100.0 35 ..................................... TACCGTATGAATCAATGATGGAGCATTCATGATGA 2693033 37 94.6 35 ......................T.....A........ AATGGCATCATTGATCTGCTGCATATGCTGGAGCA 2693105 37 94.6 37 ......................T.....A........ CAGCGATGCGTCAACATCCTGCGGTCTGATGAGAAGA 2693179 37 94.6 37 ......................T.....A........ AATATGTGCAGAATACGTACATAAAGCCAGTAGAGAA 2693253 37 94.6 37 ..........GG......................... TCCGTCTTTGAACCAGGACCGAAAGCTGTGCGGCGGT 2693327 37 94.6 39 ..........GG......................... GCTTCGTCCGGGTGTAACACCACGCATTCGCCGGCCAGA 2693403 37 100.0 38 ..................................... ACTGACCGCTGAGATGGTTCTTTTGCGCGATTACGAGT 2693478 37 97.3 37 .............................G....... GTGCCACTCGCAAACAGAAGCGATAACTCATCTCCAG 2693552 37 97.3 37 ......A.............................. ATAAGCCATTCTGCGAAATCATACGCATTTCCACTTC 2693626 37 89.2 37 .....................GC.........A...G ACGTGATCAGATGAGTGATATGCCAACGTGGCATCTA 2693700 37 73.0 0 ...CT..GT..T.........GT......G..A...G | ========== ====== ====== ====== ===================================== ======================================= ================== 18 37 95.2 37 GTTGCAGAGGAATCGATCCGAAAGAGGATACTGTAAT # Left flank : CATTGTGATAAAAGGCTGAGATCCTATTCATACTCTTACTTTACAATCCAAGCATTAAAATGAGAATAATAGGAAATATGAAAAAAATCCTTTGTGGAATATACTACATGAATATCAGATTTTCACCAGAAAGAATTAACTGTTTTTGATGGCATGCAGTGCAGTATAGAGTCGATGGTGTTATTGACAATCCCCCTGTTGAACGCCCTGAATTACTGACCCTCCGAAAACCTCTCTAGAGCTGGTTAGAAAAGGGGCTAATGGTATCCTGATTAGCATAAATCAACGCTGCATAAAATATGAATAAGAGTAGAAGCTAAGAGAACAGATCTGAAAATCCCCCCTTGTTTTGCTACAAAAAGAGGTTTTCGGATGGATGGGTTTATGGTATACTTATGAAGGACGAAGTGCAGAAAAACGTCGCACTGAGAGGCCAAAAAAAGGGCCTGTCAGACCAAAAAGGTCAAAAATGTCCACCCCACCTCTGCCAAACGCCCGCG # Right flank : GTTTGAAATGAGTATTTGGGTTCATCAACGTGCAGGAAGCGTTTTAGGATAGTTGATCCAATTGAGTATATCGTAAACGTAGGTTCGGCAGAGTCGATGTTCGAGATTGGTAGTTTCATGGGTGGGGTTTCGACCCGGGCGAGGTTATGATAATCAACGATGTGAAAAAGCACGGTATGGTCGTCGTGCGGAAAAAGATGGATCATATGGTTACTTGCTATAAAGCAACCATATAATCCTGCTGCCCAGAGATACATGGCATCGCAGGCAAAAATTATGAAATGATGCGATACCAGCCGTTACCTTTAACTACATTCTTGCCAACATGAATAAGTTCCCCAACCACCAGCAGCCCCAGTAGCCCGGTGAGCATGCCTGTAAAGGTAGCCTGCCCCACCAGGCCACCAATAGGCGTACTGCGTTTCTGACGATTCGAGTAACTTGTTAACTCCTCCCACTGAGTACTATCATCGCTACAGAGAACGCCATCGGCCTGTTGC # Questionable array : NO Score: 2.61 # Score Detail : 1:0, 2:0, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.59, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGAGGAATCGATCCGAAAGAGGATACTGTAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.30,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 4 2696798-2695875 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIFR01000001.1 Tengunoibacter tsumagoiensis strain Uno3 sequence1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 2696797 37 97.3 37 C.................................... GCGGTGGTACAGATCGTTTTATCACGCGCCCCGAAAC 2696723 37 97.3 37 .......G............................. CAAGTAGTCGGCGTCTCTTTTAAGCAGACGATAGATG 2696649 37 100.0 35 ..................................... GAGCCCGATCATCTCATCATTGACGAACAGGAATA 2696577 37 100.0 36 ..................................... AGAGGTGCAGGTTACTATGGGTTTTACGTCGCCATA 2696504 37 100.0 38 ..................................... CAATGACGTGACGACGTGTGACCGGCTATACATATGTG 2696429 37 100.0 36 ..................................... GAGCAATGGATTGATGCCCTGTATGTCATTATGCCA 2696356 37 97.3 38 ................A.................... TGGAATGGACACATCGAACCTCCTACCAGCCCCGAACG 2696281 37 100.0 37 ..................................... GCCCTCCGTTGATTACGCCAGAATTGTGCGCCGAGAT 2696207 37 100.0 38 ..................................... ATTGCCCAGGCTTTAGACAATAACTTTACTGTTTTCTG 2696132 37 100.0 37 ..................................... GTTTCCCGTTACTGCTGCGTGCGCTTGCGTGCGCAAC 2696058 37 97.3 37 ................A.................... TTGTGTTAGCAGGTGCACCACCTGCACTTGTTTGACG 2695984 37 94.6 36 ................A...............A.... ATAGGTGACATCAAAGCCGCGTGCCATGCTGATAAT 2695911 37 91.9 0 T...............A.A.................. | ========== ====== ====== ====== ===================================== ====================================== ================== 13 37 98.1 37 ATTACAGTATCCTCTTTCGGATCGATTCCTCTGCAAC # Left flank : TCGTTTCTCACCCAGGTAGCGGCAATGCTCAGCCCGTGGTTATTGCCGCAGTCACTGCCGCACAAACCGTATGATCCCGTGCAAGACCAGGACGCATTGGATCTGTATGTGCGCTACAACACAACCGAAAAGGGCATTCGCGTCCTTCGACAACGCAAAATCTTTGTGCTCAGGCGAACAGAAATCACCTCTTAATGAGCATGAGCCACAGAGGCAATTGCTACGACAATGCGGTGATGTAGCGGTTTTGGGTCACACTCAAAGGTGAGTGAACCTCTCGCTACGTCTTCCTCGCCCACGATCATGCACGTTCCATGATTTTTGAATACCTTCCGTGTTTTTATAACCGAGTTCGTCGGCATTCGACGTTAGCCTACCTCAGCCCTTTGCATGAGGTTTTACAGTCGTAGACTTTCAATTCTCTGCTTCTACTAAACCGGGTCAATGACACGATTTCTCTGCAACTGTGGGGGTGTGGTCTATGCCTCAACTCATCCATT # Right flank : CGCAGGCGTTTGGCAGAGGTGGGGTGGACATTTTTGACCTTCTTGGTCTGACAGGCCCTTTTTTTGGCCTCTCAACGCGACGTTTTTCTCTATCTTATCCTCCATAAGTATACCATAGACTCATCCATTCGAAAACCTCTTTTTGCGCCAAAAACAGGGAGGATTTTCGGGTCAGTTCTATCTACTCATACACTTTATCTATTCTTTTGAAGAACGCATTTTTGTTAATCAGAACAGGTTTGGCCCTGATTTTATTGCGGCGAGTATAGGTTTTCGGAGAGGGTCGTTTTTGGGCACACATAAGGAGCGTTTCGGCTGGCCTGCCAGGTCCCGGACGAGAGCCCGTTGCAGACGCTTCTGCCCACGCTCTTGCTGCAGATAAACTATCTCGGCAAGCGTGGAGGCTTTCTACAGATCATGGGTCAGCCCCAGAGCAGTCGCGAGCTTCCCGCTGGACACTTTATCCAGCTCACTGCCACCGCCCTGCAGGACTTTGAAAC # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.96, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTACAGTATCCTCTTTCGGATCGATTCCTCTGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.30,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 1 214000-212932 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIFR01000002.1 Tengunoibacter tsumagoiensis strain Uno3 sequence2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 213999 37 100.0 35 ..................................... AATTGCAGTGGGGATTGTTATCTATTATATCGTAA 213927 37 100.0 37 ..................................... CGCGCGTGTCACACACGAACAAAACAGATACACTGTC 213853 37 100.0 36 ..................................... ATGGCTCTGTGGCCAGACGGAGTTCTCCAACTTCAT 213780 37 97.3 37 .................................C... CAGCGCACGTAATGACTCAGCATGCCAGAGCCTGTAC 213706 37 97.3 37 .................................C... CAGCGCACGTAATGACTCAGCATGCCAGAGCCTGTAC 213632 37 97.3 35 .................................C... CGGTTGGTATCTCGAAACTTGGACAAATGGGCACA 213560 37 97.3 35 .................................C... TTATGATTGGTTAATGCTGATGTGCAGACACACAG 213488 37 100.0 40 ..................................... TATGGGATCGCAGAAATCACTCATCAGATCAAGATTGTTC 213411 37 100.0 38 ..................................... ACGAATACACCGTGCCAGCGGCAAGAGAGAAGGGTCTT 213336 37 100.0 37 ..................................... GACTCCGCAGCGCTATATTCTATGATCTGTTTTCCAT 213262 37 94.6 36 ..............................T..C... TGGTCCGCTGGATTGAACGCGCAGCCTGGATAGCGT 213189 37 97.3 37 ..........C.......................... ACTGTTGAAGCCGCGCCGTAGCGATGCCGAGAATGAA 213115 37 94.6 37 T...................G................ TGGCACAAGTGATGATAGGGTGAGTCAGTATCGGGGC 213041 37 94.6 36 A...................G................ CGAAAACAGGCGTAACATCCACAGACGAGAATACTT 212968 36 89.2 0 ..........A.......T......A-.......... | C [212946] ========== ====== ====== ====== ===================================== ======================================== ================== 15 37 97.3 37 GTTGGAGAGGTTTCGATCCGTTTTAGGATACTGTAAG # Left flank : ACATATCATAATTAAAGAGGATAGTCAATGGAAAAATTCAGTATCGGTATGTTTTGCTAGAAAAGTATTCTACCCTTTAGTATGAATTTTGTAGGAAGCAATACATAGTTTTACTGATTAAGCATGAAAAAATTCTCAGACAGACACATTGACCAGAGCATAGATAACTTTTCAGGTGGGCGATCCTCTTTCCTGCCTTCTCTCTGCCTGAAAATGACCATTCTCCGAAAACCTCTCTCAGCAGTACAAGAAAACAGGGCGAATGTATCCTGATAAGCGCATAATAAGCATGCAAAAGATTTGTATAGGAGTAAATAAGGACAAAACAGATCCGAAAATCCCCCCCGTTTTGGCGCAAAAAACGGTTTTCGAATGGCTGTGGTTGTGGTATACTTATAAAGAGAGAAACAACAAAAAACGTCGCGCTGAGAGCCCAAAACAAGGGCCTGTAAGCGCAAAAAGGTCAAAATAGTCACCCTATCCCCTCTCTAATGCTCTCG # Right flank : ATCAAGCTCATCAATGAGTTGTTTTGAGTCCAACTTTCCTAGAGATGTCTCCATGGTTAGAAGGACAATAGCCCATGAGTGAGCTATCAGACCGTCCGTTACAGGTGTTTTATTTATATGCGCAGGAAGATGAAGAGTTGTGTGAGGCTCTTGAAAAGCACCTTAGCCAGCTGGTTCAGCAAGGGCTGATAGCAGGCTGGCATCAGCAGAAGGTCGTGCGAGGGACGCACCGAGCCCAGCAGATTGATGCCCATCTTAGCACGGCTCAGATTATCCTGCTGCTGGTGAGTTCAGATTTCCTGGCCAGCAATTACTGTTACCACACGGAGATGATGCATGCGCTCGCACGTCATAAGGTGCAGCGGGCCACTGTGATTCCTATTCTTCTGCGCCCAGTCGATTGGCAAAGCGCACCCTTTGCCGAACTTGAGCCACTACCAGCCAACAGGAAACCGATTACCAGCTGGCGTAATCGAGATGAAGCTTTGCTCGATGTGGCA # Questionable array : NO Score: 2.75 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.63, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGGAGAGGTTTCGATCCGTTTTAGGATACTGTAAG # Alternate repeat : GTTGGAGAGGTTTCGATCCGTTTTAGGATACTGCAAG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.80,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 225766-224915 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIFR01000002.1 Tengunoibacter tsumagoiensis strain Uno3 sequence2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 225765 37 100.0 36 ..................................... TCTAATAAGATGTGGCTGGCTCGCTTATCCTCAAAC 225692 37 100.0 38 ..................................... AATCACGGGCGCGTAGTTCGTGAGTAAGATAGGCGTAA 225617 37 100.0 35 ..................................... TTTGCAAGTATATACTTCAACAAAGGGGTAGTAAC 225545 37 100.0 38 ..................................... ATTCTTGCCCTTCCCAGTGGCCCATCATCTCATAATGA 225470 37 100.0 35 ..................................... TTTGCAAGTATATACTTCAACAAAGGGGTAGTAAC 225398 37 100.0 38 ..................................... ATTCTTGCCCTTCCCAGTGGCCCATCATCTCATAATGA 225323 37 100.0 37 ..................................... GTCATGGGTGTCTACCTCAATTTTGCTCCAGCGCTCG 225249 37 100.0 36 ..................................... GTATTGCTCATGAATTGGATAGCTACCAGGTGCGAA 225176 37 94.6 39 ..........T......................T... TCATTGCGACATTCGCCCACTCTCTGTTAGCTTGCTGAT 225100 37 94.6 39 ..........T......................T... TCATTGCGACATTCGCCCACTCTCTGTTAGCTTGCTGAT 225024 37 97.3 36 ........................T............ ACTCATTTTGAGAACGACACAATTCTCGCTGATATT 224951 37 89.2 0 ...A......T...................C..T... | ========== ====== ====== ====== ===================================== ======================================= ================== 12 37 98.0 37 GTTGGAGAGGCTTCGATCCGTTTTAGGATATTGCAAG # Left flank : ATAGTTACGTCCATCAAAAGACGTGGCGGCCCAGGCTCAATCCAGGAGCATCTCAATCTGATAGTCTGCTAGAGGCTTATCTATCGCTGGTAAATTGTCGAACATCTTGGCTGCTTATCCTTATGAAAAAATTCTCAGACAGACACATTGGCCTGAGCATAGATACACTTTTCAGGTGAGCGATCCTCTTTCCTGCCTTCTCTCTGCCTGAAAATGACCATTCTCCGAAAACCTCTCTCAGCAGTACAAGAAAACAGGGCGAATGTATCCTGATAAGCGCATAATAAGCATGCAAAAGATTTGTATAGGAGTAAATAATAACAAAACAGATCCGAAAATCCCCCCCGTTTTGGCGCAAAAAACGGTTTTCGAACGGCTGTGTTTGTGGTATACTTATAAAGAGAGAAACAACAAAAAACATCGCGCTGAGAGCCCAAAATAAGGGCCTGTAAGCGCGAAAAGGTCAAAATAGTCACCCTATCCTCCCCCCAAGGCTCTCG # Right flank : CGCTGTTCTTCCACCAGGCTGCAAAATGCCAGGTCCGTTGGAGAGGATTCAATCCGTTTCTACACATGTTCCTGCTCCAATGCATGTAGACTAGCCTGCTCCTGCTCTGATATAATCAACCTCATCAATCCACTACGAGACATCATTACGAAAAGAAGGTTTGATCATGTCCTCACTGCAAGAGCAATTGAACCAGATTCCCTGGAAATCGCTCCGACATGCCTATGGACCTGCAATTGACACCCCTATACACCTGCTCGCACTACTCTCGGAAGATCAAAGGGAACGGGAGAAAGCACTAGAACATCTTTGGGCTTCCATTTGCCACCAGGGCAGTGTCTATGAAGCCTCGGCTGCGGCGGCCCCTTTCTTGACCCAGATTCTTGCACAAGTGCCAGATGAACAGAAGCTGCCTTTACTTGACCTGCTTGATAGCTTGTCTGGACGGTACTGGGCTGCTGGACGTGATCTGGTGAGGCTAAGCATGTTTGATACAGCCC # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGGAGAGGCTTCGATCCGTTTTAGGATATTGCAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.80,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 3 1146570-1145791 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIFR01000002.1 Tengunoibacter tsumagoiensis strain Uno3 sequence2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ============================================= ================== 1146569 32 100.0 42 ................................ CGGACTCCTTTTGATGTGATTGGTATCCATGATCATCCACAG 1146495 32 100.0 44 ................................ CCAACCTTATACTATAATTTGCAGTCAATTGCAGGTATCTTGAA 1146419 31 90.6 43 ...........-..A.............T... CAGACAAAATTGATGGTGTTGACGCTTGTCATGATTGTGAGAT C [1146405] 1146344 32 87.5 42 ...................A.....CA....C CAGACCACCGGAAGGCGTGGCAGAAACACTGATAGATCCTGC 1146270 32 100.0 42 ................................ CAAACAGATAATAAGGATGAGGGCATGAGCGAGTACATTGAA 1146196 32 96.9 42 ...........................T.... TGGACTCAGGATGTTGCCGCGCCTGGCTGACAAGCTTGCCTG 1146122 32 96.9 45 ..................A............. TGGAATCCAACCAGTTTATGGAACTGGGCCCAGAATGATCAATCA 1146045 31 87.5 42 ...........-..A...A.........T... CAGACAATCATGAGTAAAAATCCACAATGGCGGTAAGCGGCA C [1146031] 1145971 32 100.0 42 ................................ TGGACTAGAGGGCCGCATCATTGGAAGCGCTGTTTTTGAGGT 1145897 32 93.8 43 ........................A...T... CAGACAATACTTCTGGTGTATTCAGTCACTACTGCCAAAGGCA 1145822 31 93.8 0 ...........-................T... | A [1145809] ========== ====== ====== ====== ================================ ============================================= ================== 11 32 95.2 43 GTTATAATCCCTCTTTCGGGCTTTCTCCCATT # Left flank : TCCAGTTACCATCTCTCTTTTGGGCTTTCCGCTCTTCCGACTGTCGTTTCATTCGCCCAGGAGAGACAAGCAACCTTCCCTCCTTGTAGTATTCGATATAAGAAAAATTACACTTATTGTAATGTAAAGTAGGGAAAGCCGCTTGTCTCTTTCCTCTGCTGGGGATCTCCGATGGTCGCTCCTCCATTGCTCAATGGGAAAGGATATTATGGAGGGGCTACCATGGTGGAGCTTCACGATTGAGGAAGGAGACGCCCTACTTGTATTATCTATTTTTGTCAAAAATACTAATTTATGCTTGTTAAATCGTTTCGTGATGAGGTTTCTTTCTCTGGTTCCGATGCTATTCGGTCCACCTTCACTATGTTGACCTGGTTCATTAGAAATGATACGCATGCTCAGTCAAGCCAGGTTGATCAACAAAGGAATTATCAGCACCTTCGTGTTCGGGCTTTCTGCCACATTAAGCAATCGACAGTATCCATCGCCATCGCTCGACG # Right flank : CAGACCCCTGCCCTTCTAGTATAGCATAGAAAGCGGGTTGATGGGGCATTTTGCAGTAGGCTCTATTTTAAAGCACTTGTTCAGGACCAAAAAGCGCCTTTTTTTGAAGGTGAATTCCCATCAAGCCTCCTCCAGAGCGATGCGGGAGGCTGAGCTCAGCACCGAGGCCGCAACTCCCTCCCGCAAAAGGGGTCCGGAGATTTCTTGTCGCGCTGTGTATGGTACAATACAAGTCGTGAGGCTTCATTTCAGGGCGGTAAGCTACTGGAGGCCCGGTGTATTGTCTGCGTCATAAAGTGAGAAATTCATGGATCTTCATCGGTATATTCTGTTGATTTATCAGGTACCCAGCCAACCTTCCGGTATCCGTGTCAGTGTCTGGCGTGAGTTGAAGAAAATAGGCGCACTCTATCTCCAACAAAGTGTCTGTATTTTACCCGAGCTCGATTCATTGGTCGTGACTCTGCAAAAAATTACTGAGCGTATTACTGAGCAAGGCG # Questionable array : NO Score: 2.63 # Score Detail : 1:0, 2:0, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.61, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATAATCCCTCTTTCGGGCTTTCTCCCATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.80,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 4 1147342-1147969 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIFR01000002.1 Tengunoibacter tsumagoiensis strain Uno3 sequence2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 1147342 37 100.0 38 ..................................... CATCCGTTGACGCACTCAATCATCTCAAGTAACATCGT 1147417 37 100.0 39 ..................................... TCTTTGCAGTTTTGTCCACTCGTCATAAACGAGGACTAT 1147493 37 100.0 35 ..................................... CGTCGGCTAAAAATTTCTTAGGGACCAGATAGACC 1147565 37 97.3 39 ............A........................ GGCCGTGTCTCGAACGAGAAGTTGAACTCTATCGTATTA 1147641 37 97.3 37 ....................A................ CTGCAAATCCTCCATCGGTTCGACCTGGTTAGCAGGC 1147715 37 91.9 35 ......................G.AG........... TTCCAATATACCGTGATAGGACTCTTTTTCCCTCG 1147787 37 83.8 36 ...G....G.G...........G.AG........... TATGTAGCACAGGAGTGGGCAATTGTGCAGAAAGGC 1147860 37 86.5 36 ...GG.................G.AG........... CGGCGATTATTGACTGGTATCAAAGTGGATGCAGTT 1147933 37 81.1 0 ...GG...G.G...........G.A..A......... | ========== ====== ====== ====== ===================================== ======================================= ================== 9 37 93.1 37 GTCTAAATAGAGGAAAGCCCGAATGAGGGATTATAAC # Left flank : CACCATGGTAGCCCCTCCATAATATCCTTTCCCATTGAGCAATGGAGGAGCGACCATCGGAGATCCCCAGCAGAGGAAAGAGACAAGCGGCTTTCCCTACTTTACATTACAATAAGTGTAATTTTTCTTATATCGAATACTACAAGGAGGGAAGGTTGCTTGTCTCTCCTGGGCGAATGAAACGACAGTCGGAAGAGCGGAAAGCCCAAAAGAGAGATGGTAACTGGAGACAATACAAAAGGCCCTGCTCTCTTTTATGAATGTGAGATAAAGGAAAACCCGAAAGAAGATACGACCTTTCTGTCAGATGAAAGACCAATTTTGCGGGAGGTGGTCGTGCCCTCGGTGCTGAGCTCAGCCTCCCGCATCGCTCTGGAGGCGGCTTGATGGGAATTCACCCCAAAAGAGCCTCTTTTTGACACCGAAACAGCGCTTTAAAAAAGAGCCTCACGCAAAATGCCCCCTCAAGCCGCTTTCTATGCTATACTAGAAGGACAGGG # Right flank : CCTTCAAAATGGTGAAGAGATGCATCAGGCATTTGCTTTTTAGTCCAGACTTGCATAGGATGGTGAGCAAGCAGATGAGGAGCAAACCCTATGAAGATTGAACCTGTCGAGTTAAAAGGCATGCGAGCCCGGCTTGTCCCTTTGGAAGAGGCCCATATACCAGCTCTCTATGCAACGGGACATGATGAAGAACTCTGGACGTATTCGGCTCTGAAGGCAACGACGCTTGAAGAGATGTCTCATCTCGTTCACACCTTTCTGCAAGATCAACGACGAGGCGAAGCGCTTCCATTTGCCATTATTGATCTGGCAGATCAGCAGATTGTTGGATGCACTCAACTCCACTCGATTTCCCAGGAGCATCGGCATGGGGAGATCGGGAAAACCTGGCTTTCTCCTCATACCTGGGGGACCCACCTCAATACTGAATGTAAGTATTTGTTGCTGCGCCATTGTTTTGAAACCCTTGCAATGCTTCGTGTTCAATTTCGGACAGATGG # Questionable array : NO Score: 2.50 # Score Detail : 1:0, 2:0, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.59, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAAATAGAGGAAAGCCCGAATGAGGGATTATAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.80,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 5 1166125-1166676 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIFR01000002.1 Tengunoibacter tsumagoiensis strain Uno3 sequence2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 1166125 37 100.0 37 ..................................... CTTAGCACTTTACAAACACCATCTATTGACTCACTTT 1166199 37 100.0 36 ..................................... ATTGGAATTAAAGAATTCAACTGTTCAAGAGTGTTT 1166272 37 100.0 36 ..................................... ATTGGAATTAAAGAATTCAACTGTTCAAGAGTGTTT 1166345 37 100.0 35 ..................................... AGGCTCGCATACACACGCAGCCCAGGATATGCGGC 1166417 37 100.0 35 ..................................... CAGTATCCGTATGCCTGGGAATAGTGCAGAGATAG 1166489 37 100.0 38 ..................................... TGTATCCCAAACATGACGTTATATCCGAGGATCATCCA 1166564 36 81.1 39 .......T..AG..........AG.-.A......... TATTTCACGAGCGCATTTGCGGCCAGTTCACTGGCTTCC 1166639 37 78.4 0 .......T..CTA.........CA...A...G..... | A [1166660] ========== ====== ====== ====== ===================================== ======================================= ================== 8 37 94.9 37 GTCCAAAGAGGAGAAAGCCCGAGTAGGGGATTATAAC # Left flank : GATGCCCTTTTCAATCTGTGTGATGCATTGTTGTCGGAAGATCGTGCTCGCAGCTTACCATAATTGTCGCAATTACCAAGTCTGTATCAAGCTTTGAGTCGGGTTGCATTGAGATAGCTGCCTATTTGTCTAAACGTCAACTCACAAAGAAAGAGTTGATTTTGCTGAGAGCGAAGCTTGCCAGGCACCTAGATGAGGAAAATGATAGTGTTCGTTTTTATCCTCTTTGTTCAAACTGCCTGGATAAAGTTGAGACCGTAGGCGGACCTTTACCAAAAGAGGAGAATATCTTTCTTGTCTGAGAAAGAGTAGGACCATTTTAGCGGGAGGTAGTCGTGGTCTTGGTACTGAGCTCAGCCTCCCGCGTCGCTCTGGAGGCGGCTTGAGCAGACTTCACTCCCAAAAGAGCCTTTTTTTGACCCCGAATCAGCGCTCCAAAAAAGAGCCTCCCGCAAAATGCCCCCTCAACCCGCTTTCTATGTTATACTAGAAGGGCAGGG # Right flank : CCTCAAGCAGCCATCATCGTGTATTGATCTCAGGGCGTGGCGTCCGCATAGCGTCATGTCCAAAAGGTGCTACTATAAACTGGAGACTGGGGGGACTTCACCTCCAAAAAAGGCTATCAAGCTGACATGCAAACAAGTTGGCATAGCGAGAAGCCAGGGAGAACTGATCCTCCCTGGCTTCTCTGTTCTGCTGGTAAGGGGTTTATTGTTATGTCCAGTATTTAGCGACGAATAGGCTCGCCGGTGGTTGGATCGAGGTAGAGTGAGCGGGTATCGTCGTTATGGAAGTCGAACAGATTGTTTAAGGTTCCGGCAAGGGCATCAAAGGACTGATTGCCAATGCGTCCAAGCTTCCAGTTATCTTCAATGAAGCGTAAGATGGAGCTCTGGTCGGTGACGGTATGATCGACGGAGTTCTCTTTGGCAAAGGGCGAAATCACCATTAAGGGTAAGCGAGGACCATAGCCACAGCGGCCCTGATAGGCGCCAGCTTTCGCGGC # Questionable array : NO Score: 3.01 # Score Detail : 1:0, 2:0, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCAAAGAGGAGAAAGCCCGAGTAGGGGATTATAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.90,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 6 1173434-1174132 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIFR01000002.1 Tengunoibacter tsumagoiensis strain Uno3 sequence2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 1173434 37 100.0 36 ..................................... ATCCTTACCTCACATATCTAGGACCTGTTTCACAAG 1173507 37 100.0 35 ..................................... TGGTAAGCTTCCAGAGACAATCCATAGGTATATTT 1173579 37 100.0 37 ..................................... ATGCCCGCGTCGTCGAGAATCTGACGCACAATTTTGT 1173653 37 100.0 37 ..................................... CTACAGTTGATATCGTTCGTGAAATGTACGAATCTGT 1173727 37 100.0 38 ..................................... GGCCATTGCCTGTACAATGTCTCGGCGTTTGGGCATAT 1173802 37 100.0 36 ..................................... ACAACCAACAATATGCCTATAACGCCCTTCATACCT 1173875 37 100.0 38 ..................................... TCGTGCTCGATACGGTGACTCCATTCGAATTCCTTATC 1173950 37 83.8 36 ...CA..GA.GA......................... CTGAAAAAATTAGGACAATACTGCTATGACTCTAAC 1174023 37 83.8 36 ...CA..GA.GA......................... TGCTCAGAATAGAGACGGGGGGATATTTCTTTTTGC 1174096 37 91.9 0 ........A.C................A......... | Deletion [1174165] ========== ====== ====== ====== ===================================== ====================================== ================== 10 37 95.9 37 GTCGGAATGGTGGAAAGCCCGAAAGAGGGATTATAAC # Left flank : CTTCATAAAGCGTTGCGATCGTTCCGGCCAGCAGTCCATAAAATGTCAGGCTGCAGAGACCCAGGACCGCAAACAGGCTTCCAAAGAGGAGAAACTGCAGTAGACCAACAATAAACGTCATTAGTTTTACATCGAACAAGAAAAGCATGAAAGGTTACTTGTCTTTCCTGGGCGAATGAAATGATGGTGGGAAGAGGGGAAAGCCTCAAAGAGAGATGGTAACTAGACGCAATAAAAAAGGCCTTGCTCGCTTTTATGAATGTGCGATGGGGAAACCTGAAAGAAGATACGACCTTTTCTGTCTCATGAAAGACCAATTTCGCGGGAGGTGGTCGTAGTCTCGGTGCTGAGCTCAGCCTCCCGCGTCCCTCTAGAGGCGGCTTGAGTGGACTTGACCCCCAAAACAGCCTCTTTTTGACCTCAAATCAGTGCTCCAAAAAAAGAGCCTCCCGCAAAATGCCCCCTGAACCCGCTTTCTATGCTATACTAGAAGGGCAGGG # Right flank : CCCCACTCGGGGAGCAATGCAGCGTAATAATCAGAACTGTACGAAGAAAGGATTATAACGCAATAGTTATCTCCCCATTGAAGTGATAGATGAGAGTCCTAATGGGAGAAAACCCGAAAGAGAATAGGACCCTTCTTACGTTGATGAAAGACCAGTTTAGCGGGAGGTGGTCGTGGTCTCGGTGCTGAGCTCAGCCTCCCGCGTCTCTCTGGAGGCGGCTTGAGGGGACTTCATCCCAAAAACAGCCTCTTTTTGACCCCAAATAAGCGCTCCAAAAAAGAGCCTCCCGCAAAATGCCCCCTCAAGCCGCTTTCTATGCTATACTAGAAGGGCAGGGGTCTGAATGGTGGAAAGCCCGAAAGAGGGATTATAACAAAAGATCTTCAGAATGAAGAGAGTTGAAGCTACTGTCTGAATGGTGGAAAGCCCGAAAGAGGGATTATAACTACCACGCAATAAAACATTTGTCAAGCATTAAAATAGTGTCTGAATGGTGGAAA # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGAATGGTGGAAAGCCCGAAAGAGGGATTATAAC # Alternate repeat : GTCCAAAGAGGAGAAAGCCCGAAAGAGGGATTATAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.80,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 7 1174469-1176206 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIFR01000002.1 Tengunoibacter tsumagoiensis strain Uno3 sequence2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 1174469 37 100.0 35 ..................................... AAAAGATCTTCAGAATGAAGAGAGTTGAAGCTACT 1174541 37 100.0 38 ..................................... TACCACGCAATAAAACATTTGTCAAGCATTAAAATAGT 1174616 37 100.0 37 ..................................... TTATAGTGAGATACCTCATAAATTCATTGAAGATATA 1174690 37 100.0 38 ..................................... TCAAACGGTGGAAACGCATTCTCTATGATGCGTCCAGA 1174765 37 100.0 37 ..................................... GTTCATCGATCATTTTTGAGAGATATTCCTGTTGCTG 1174839 37 100.0 36 ..................................... CGTCATATACTGCTTTGGTAAGTATGCGCTTCGGTA 1174912 37 100.0 36 ..................................... CGGACGGATTGACATTGCTCGACATCGTCGCATAGC 1174985 37 100.0 37 ..................................... ATGTCGATAAAGGATCTGCGCGACGCCGCCATCTTTG 1175059 37 100.0 38 ..................................... GAGAGATATTCGATAATAGCGTCTCTGTTTGTTTTTAT 1175134 37 100.0 36 ..................................... GGTTAGAATCTGCTATAGAGCTTCTTAAAAGCGAAA 1175207 37 100.0 35 ..................................... AGCTGGTCCATAGCCATTTCAAAGCTATTTTTGGT 1175279 37 100.0 38 ..................................... TTGTGCGGAGAAGTGTCACGATCTCCGATGCAACCTCG 1175354 37 100.0 37 ..................................... TACTGCTTCCACTGGCCCCTGTCCCTGCAGGGAGGAC 1175428 37 100.0 38 ..................................... GCCGGGACTGCCGGTCTGACGGGCATTGCCTCCAGCAC 1175503 37 100.0 39 ..................................... TCTCAGTAGCCTGAGCAACAGAACGAACATTGTCGAAAA 1175579 37 97.3 39 .........................G........... AAGAGTGTATACCGACATACGGTAGACGAAGTGTTTGAT 1175655 37 97.3 35 .......................T............. GCCACACAGCAAAATCAAAGAATAGCCTTTTTCCA 1175727 37 86.5 35 ......................GTAG........G.. TTGTACAGGCAGTAACAGATAGTAATAGATATGAA 1175799 36 91.9 37 ...G..................T..-........... TGTTCAATTTTCACTGGACGATAGCATCCATCTTCAT G [1175821] 1175873 36 91.9 36 ...G..................T..-........... TGCCGCTCGTTCGGTCACATGATCAGGAAGCGCAGG G [1175895] 1175946 36 94.6 38 ......................T..-........... GATGTTCATATTGCGATGCCAGAAATTGCAAATGAATT G [1175968] 1176021 36 86.5 38 ...G....A.GA.............-........... GTTCAGTATCTAATTCTTGCTCTTTCTCCATGCTCTGC T [1176044] 1176096 37 97.3 37 T.................................... TGGAATAAAAAATTCTGATTGTCAAGCCATCCAATGG 1176170 36 81.1 0 ..TC....A.CA.........-...........C... | C [1176197] ========== ====== ====== ====== ===================================== ======================================= ================== 24 37 96.9 37 GTCTGAATGGTGGAAAGCCCGAAAGAGGGATTATAAC # Left flank : CGAAAGAGGGATTATAACCTGAAAAAATTAGGACAATACTGCTATGACTCTAACGTCCAAAGAGGAGAAAGCCCGAAAGAGGGATTATAACTGCTCAGAATAGAGACGGGGGGATATTTCTTTTTGCGTCGGAATAGCGGAAAGCCCGAAAGAGAGATTATAACCCCACTCGGGGAGCAATGCAGCGTAATAATCAGAACTGTACGAAGAAAGGATTATAACGCAATAGTTATCTCCCCATTGAAGTGATAGATGAGAGTCCTAATGGGAGAAAACCCGAAAGAGAATAGGACCCTTCTTACGTTGATGAAAGACCAGTTTAGCGGGAGGTGGTCGTGGTCTCGGTGCTGAGCTCAGCCTCCCGCGTCTCTCTGGAGGCGGCTTGAGGGGACTTCATCCCAAAAACAGCCTCTTTTTGACCCCAAATAAGCGCTCCAAAAAAGAGCCTCCCGCAAAATGCCCCCTCAAGCCGCTTTCTATGCTATACTAGAAGGGCAGGG # Right flank : CCAGCATCGAGCCCGCTATCACTAAACATCTCCATGAAGCCCAAATAGAGGAAAGCCCGAATAGGTGTTTGAGGCATCATAAAATGTATCCATCAGCAATGTGCTTTGAGAGGTATTTTTCAGTTAGCGTGAGATAGAGTGCAATTGTGGTGCCCATTCTTTTTCAGCAACGGCATGCGATAATGTCTATGAGTGGTTCTTTCTTTTTTGTCGCAATTGGCTCTTTTCTTGCAGACACTTTAGCGGTACTATAGCGTGAAGGAGCGAGCTTTGCTACAGAAAGAAAGGGACTAAAAAAATGTTGGCATATGTGTTCTGGCATCAACGAGCGATGAATGGAGCCAGAGAGGATTATCAGGAGAAGCTGCTTGCCTTTCATGAGATATTGCAAGAGCGGCAGTCACAGGGGTTTATCGGTTCAATAGTCCTGGAGATGGCTCAGGTGCCCTGGATGCCTGAGGGGAGTGAGGTCTACGAGGATTGGTACCTGGTAGAGAATT # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAATGGTGGAAAGCCCGAAAGAGGGATTATAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.80,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-27] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 8 1233857-1234189 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIFR01000002.1 Tengunoibacter tsumagoiensis strain Uno3 sequence2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 1233857 37 100.0 37 ..................................... GATCACAGTAGCGTGCAACCCTGCTGCCACCTGGATA 1233931 37 100.0 37 ..................................... TCGACGGCTGCCACCTCCACAACCTGAAACCCTGGCT 1234005 37 91.9 37 ........A...........C.C.............. GGAGGTTGTCGTCTCATTGACGCCGGTGCCCTTTTTT 1234079 37 94.6 37 ....................C.C.............. CGCATGGTTCGGACGGCTGCCGCCTGCTCTACTGGCA 1234153 37 86.5 0 ...A.......C........C.C......G....... | ========== ====== ====== ====== ===================================== ===================================== ================== 5 37 94.6 37 GTCGAAAAGGGTTCTGGATCTCGGTTGGGATTGTAAC # Left flank : AGCGTTCAGCGTGCCTTTCCTGCTGTTTGAGTGCCTCCGGAAAGCTCAGACGCTGACCTGGTCCGTCGGAGAAGGCTCCACTATCCTGAATAACCTGAGTGTGGGGGGCAACTTCGACCGAGGTGGTCGTTTTGCTAGTTGTAGTATTGCCTGTAACTGGAGAGATACAGGCAAAGGGCCCCGTGGCTGGTGCGTGATAGTTCCATCGTTTCTCACACTGACCACAGTAGAGCCGAATAGCTTCGTTTTCCATAATGGCCTTTCCTCAATGCGCTGCTGTTTGCACCTTGATTATGAAACCGGCAACAGAAGGCCTGTGTTTGCGGGAGGTGGGTGTGGTATTAGTCGTGAGCTGAACCTCCCGCAAGGCTCTAGAAGCCGTTTGAGAGGAGGATTCCTTAAGAAAGGTTCGAAATTTGACCTCTTCTGTGGGCAAAAAAAGCAGCCTCCCGCAAAAGCTGGCTTTTAGTGGCTTCTCATGCTACACTAGAGGGAGAGCC # Right flank : CGTATGTTTGACATATATCCGCACATTGTTAATAGGCTAAAGCCGAAAGAGGCTTGCCATCTGGTCTCAAATTGAACTGATCTTATAGAGATAAGCTCTGTACTGAAAAACCCGCCTAAAAGTTCTTTTCAAGCATTTCCTTTTATTTATTCCATTCTTCTACCTCCACAATATTTCTCTCTTTTAAACGCAAACCATAGATGAGCAAAGCTCATAAGCTATGCTCGATATCCCATAAGTGGTGTTGATGTGGCACTGACATATGAGTGTCTTGTTGGTACCTCTTTTTTCCTTGATTGAGCTCTAGCAGCTCTTGATAACGAGCAATAATGGCCTCTGGGTCTCTGTATTGGATGGTGATCTGCATAAGATCTGCGACTGCATTTCGGACATCGCTCAGCAGGTGGGCTTCTTGTCTATTTGGGATCATGGTAGGCCAGCCCTTCGTATATAGAAGGTGTCTGGGTATTCTAGACTCAAGCTGCTCTCTTTGTGCTGCA # Questionable array : NO Score: 2.71 # Score Detail : 1:0, 2:0, 3:0, 4:0.73, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAAAGGGTTCTGGATCTCGGTTGGGATTGTAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 9 1236187-1236665 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIFR01000002.1 Tengunoibacter tsumagoiensis strain Uno3 sequence2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 1236187 37 100.0 36 ..................................... ACAAACCCTTGCCGCGCTGCTTCTCTTGATTTGGTG 1236260 37 100.0 37 ..................................... ACCGAATCAGCAACGCGCTTAACAAACTCTGGGGTAA 1236334 37 100.0 36 ..................................... AGGCATCTTGCTTCAATAAGATCTACATAATCCTCA 1236407 37 100.0 38 ..................................... TCTACTGCAATCATATTAATTTACTCTTTCTTAATCGG 1236482 37 100.0 36 ..................................... CGCATTTAACGCGCTTGCGGACAACCCCGTCTGTTC 1236555 37 97.3 36 ......................G.............. CGCATTTAACGCGCTTGCGGACAACCCCGTCTGTTC 1236628 37 94.6 0 ......................G..........G... | A [1236661] ========== ====== ====== ====== ===================================== ====================================== ================== 7 37 98.8 37 GTCAAAAAGGGCTCTGGATCCCAGTTGGGATTGTAAC # Left flank : GATTTGATACTGAATATGCTTTGCCACCCCTTGCGTTTCTAATACGATAGCCTCTGCTACAATGTAAGAGCCATCTGCCCGGCAATGACGATACAAGGCTTGTGGGGCTAGGCGAAGCCGCTCCTTCTCATAATATTGCGCCTCTTGCTCTAATCGAGCTATTACTTGCGTATGTTCTGCGATAGTTTGTCGCAGTTCTTTGAGGCGTTGAGAAACCTGCTCTAAGGAATGATGAGTTAAGGGGTCAATGATCTCTGACATGGCTCTGCCTTTCTCGTTAAAATCTTTTTGATTGAAGAACAGAACATAAGAAAGTGTTTTTGCGGGAGGTAGGTGCGGTGGTGGTCGTGAGCTGAGCCTCCCGCAAGGCTCTAGAAGCAGCTTGAGAGGAGGATTCCTTAAGAAATGCCCGAAATTTGACCTCTTATGGGGGCAAAAAAAGCAGCCTCCCGCAAAAGCTGGCTTTTAGTGGCTTCTCATGCTACACTAGAGGAAGAGCC # Right flank : CTCTGACCATAAACAAACCTTCTCCAGGGCTTAGGGTCCTGGAAGGGATTGAATAACAGCTACTCCTTCCGCCAATATTCATCTATGAGCACTTCAGCCTCAGGGATATGAACGACTTTGAGGAAGTCTCGGCAGGCTTGCTCCATGGCTTGCTTGAGAATCTGTTCGGCAGGCTCCAAGAGGTGGTCTGGGCACTCCAGGACGACCTCGTCATGAACGGCTAAGACGAGGGTCACTTCTGAGGGCAGGTTCTTCTGAAGAAGGTGGAGCATGCGCTTCATGATATCTGCATTGGTTCCCTGAATCGGATGGTTTTTGGCGGATCTCTCCATGCTTGCCCTGGTAGCCCTGTCTGTTTTCTCATTGACAATAAAGGGGCGTCTACGACCAGCCAGGGTGACACCATAGCCTCGCCTGAGCGTCTGCTGAGCCGTGATACGAAGCCACCGAGCTATCCCAGAATAGGTCTGGAAGTAGGTCTCCATAAGCTGTTTCGCGAC # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAAAAAGGGCTCTGGATCCCAGTTGGGATTGTAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 10 1722558-1722156 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIFR01000002.1 Tengunoibacter tsumagoiensis strain Uno3 sequence2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 1722557 37 100.0 35 ..................................... CCATCCGGATCTTCCGTGTCTACCACGGTTTCGAG 1722485 37 100.0 36 ..................................... ACCATTAGGAAGGAATAAATTCCTCCCACCATCGCC 1722412 37 100.0 37 ..................................... CCATGATTATCATGCACTTAGCAAACCGGCTTTGGAA 1722338 37 100.0 36 ..................................... GCCACTGTTAGCGTGCAGGCCGAGAGTAAGATCGCG 1722265 37 100.0 35 ..................................... TACCAATCGTCCTCATCATTGTGCCCCGCCACCTC 1722193 37 91.9 0 .............................GG..C... | A [1722166] ========== ====== ====== ====== ===================================== ===================================== ================== 6 37 98.6 36 GGCTAAATACCTTGTGGAGCCCAGTCGGGCTTGAAAC # Left flank : CGTTGTAGCCGCAGAAGTCCAGGGCTAAATACCTTGTGGAGTCCAGTCGGGCTTGAAACCCAAAAAATAGTTTGACGTAGAAGGTCACTAATTGGACGGGCTAAATACCCTGTGGAGCCCAGGCGAGGGGAGCAATTCATTCATGCCCAGGAAACAGATAATTCTCCTGCATTTCCGATTGACAGAACAGCAGCTCCCTAAAGAAGATAGCGTTCGCTCCTCTTCTATCCACTGTGTGCCATCGTGTGGACAAGGGAGAAACAGTTGGAGGGCCATCAACCAGCCGACGATGAGTTCTTTCTGGTGGAAAGCAAGCTATTTTCCGAGCATCTCGGAACTGGTATGGCTGAGCTGAGACTCTCGGAGCACTCCACAGGCGGCTGGAAAGGCAATGAGGACAGGAAATGACCGCATGTTTCCCCCCAAAATACCCCCAAAAAATGAGATGCTCGGAAACCCTTGCATCGAACGGCTTCCTGTGCTATTCTAGAAGAGGAGCA # Right flank : TAATTCATTTGTAGAAGTCTCCTATTAATCGATTTGGCTCGATTGAGAGCACGTACGTTTATAACTATATAGGTGAGCGTATTCAGGTTTTTCACTGATTGAGCATTGCGTACTTTGGGTCGTTCAATTCCCAATTCTTTTGCTTGACTATTGATGCGTTCGCAGCTGGTTCGCTGGTTGGCAAGAGCGCGATACAGCGGGGTTGTGCGATCAAGCAGGACGCGTTGGAGCCCTCCCAGTTCCCAGTTGAGGTCTTTGACACACCCTTTTCCTTTGACAAACTGAGGATGCTCGCAGGTTTGCCCATCGGGCTGAGGATGTAAGAGCGGACAACGGAAGCGTTGAGCTTGATAGCCATTGGTATGAGCAAATTGAAACGTTGGCACCATCCGAAGCCCTTTTTCACAAAGAGGAACGCCATCAGTAGCACGTGAACTGGCATGAGTGGTATGAGCATTGAGAGGAATAGCCGCAATACCGCCATGCAGAGCCGCTTTTTG # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTAAATACCTTGTGGAGCCCAGTCGGGCTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.20,-9.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,1.15 Confidence: MEDIUM] # Array family : NA //