Array 1 49529-54463 **** Predicted by CRISPRDetect 2.4 *** >NZ_WIXN01000019.1 Virgibacillus sp. YIM 98842 Scaffold19, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 49529 32 100.0 34 ................................ AAAATTGTAGTACAACAAAATCACAAAACGAAAG 49595 32 100.0 33 ................................ AAAAATACACCTTTAATTGATTTTCAGAATACG 49660 32 100.0 35 ................................ ACTAACAGCCCAATTCCAATACTTAGAACGTGGTG 49727 32 100.0 34 ................................ CCAAGACAAACTATTATAAGCTAGGTTAGCAAAT 49793 32 100.0 34 ................................ GATTAGAGCTACGTCTACATTAGGTAAAGACCAT 49859 32 100.0 34 ................................ AGAAAAGATTTTACAATACAAAATTACCATTTTT 49925 32 100.0 34 ................................ TTTTTAGGTGATTTCTTTTCCTCTTTTGGTTTCT 49991 32 100.0 34 ................................ ATCAATGCTTACATTAAAAATGTCTGACAGCTGA 50057 32 100.0 35 ................................ CGTTAAAACAACCATTTTGGAACAGGAGTTTTCAG 50124 32 100.0 35 ................................ ATATCTAAAAATGAGTACAGGAATTTCAATGCAAC 50191 32 100.0 34 ................................ GGCAACTTCAAGGAATGGGTGAAAAACACGCCAT 50257 32 100.0 34 ................................ AAAACGAAACTTTTTTGCAGCACTTTGCGATATT 50323 32 100.0 35 ................................ GAGTAGTTGCTGTTCCACCGTTTGAGTGGCGGTTA 50390 32 100.0 35 ................................ CCCGCTTGGTTGCCCTCGGCCTTGCTTGTGCTATT 50457 32 100.0 33 ................................ TATCCGAATATTGGGACGTTTGCGGAAATCAGA 50522 32 100.0 35 ................................ TTCTAAACACATTTTCAACCAATCCCTGCTTTCGA 50589 32 100.0 33 ................................ GATCGCCCCCGTATCTCTAGCGGATTGTAAGGA 50654 32 100.0 33 ................................ ACCCGCGCTGTGGATAGCTAACTCTTCACCGGA 50719 32 100.0 36 ................................ ATCCATGCGCGCAAATTGCATATCTTTGGCCACGTT 50787 32 100.0 35 ................................ CACATCGTCGGGTGGTGGTACATCGAGAAGTACAA 50854 32 100.0 34 ................................ CAAACTATCGCCCAAAGCATCAAATGCAGGTATT 50920 32 100.0 34 ................................ CCCGATCTCTTACATGTAACATAGGTTAAGTTAT 50986 32 100.0 34 ................................ GGAAAGCTGATAGAGCCGCCACCACTACCACCCA 51052 32 100.0 34 ................................ AATTACGGTACCGAACGACATGGATGGCGGACAT 51118 32 100.0 35 ................................ CTCGACAATAGTCACGACCGGATGTCGTTGCTGTT 51185 32 100.0 36 ................................ TATCCGAATATTGGGACGTTTGCGGAAATCAGAAAC 51253 32 100.0 34 ................................ TTCTTCCTCCCTGCCACCGTACTCTAGGAAAGAG 51319 32 100.0 34 ................................ CATCAAATGCACCTGTTGATACAAAAAGAAAAAT 51385 32 100.0 35 ................................ AAGGATTGAGAACTCACCCGAGAAGCAGTGACCAT 51452 32 100.0 33 ................................ TTGCATAAGTCTGTACCAAGCTGTTATATTTTT 51517 32 100.0 33 ................................ TCGGATAACCGTGTTTACGTATTTTCGATATAT 51582 32 100.0 34 ................................ AGTTTGAAAAAGAAAAAGGAAGGCAAACCACCGG 51648 32 100.0 33 ................................ TATTTTGAAAAATGCAGACAACATTACTTATGT 51713 32 100.0 33 ................................ CAAAATATCGGCCAATCTGTCTACTGCTTCATC 51778 32 100.0 34 ................................ CACAATGAGGGTTACAGGGGGCAAACTATTAAGG 51844 32 100.0 35 ................................ TGCTGCCTCAGCATCTGCCCCGATAGAATACCAGG 51911 32 100.0 35 ................................ CATGGCGTTGACGATCCGCAAAAACTAAAATCTAT 51978 32 100.0 37 ................................ ACCTACTATCATAATAACATCAAGAGTCGGCTTAAAA 52047 32 100.0 34 ................................ TAAACGGGTTGCTATTGTATTAATGGCTGTTAAA 52113 32 100.0 33 ................................ TACATTAAATATAGATGCCCAACGGTAATTTGA 52178 32 100.0 34 ................................ TGGAAGCTGTGAAGCCCTTAAATGCTGAACAAGG 52244 32 100.0 33 ................................ AAATAGGAACCGGGGCGACTGGTGAGAGTTTAG 52309 32 100.0 34 ................................ AGCCTGGAATCCTTCTTGCTTGTGTTTGTCGTAT 52375 32 100.0 35 ................................ CATCTGGCGAATAGTAATAAGTGTCCAGCAGGATC 52442 32 100.0 34 ................................ TTTGAAAAAGCTGAAATCGGCAATAACTCTGTTG 52508 32 100.0 34 ................................ TCAAATGGCTCAAGAGGTGATAGATGGCAAACAC 52574 32 100.0 34 ................................ CAAATTAGGGTAAAGCACATCCAATGGCACTTGT 52640 32 100.0 35 ................................ TCTAATGACATCCCAATATTGTTTGTTTAATTTAT 52707 32 100.0 34 ................................ TACAAGGTGGTGACTGCATGAATTTAGACAGGGC 52773 32 100.0 35 ................................ CACCCCTTTATCGTTCATTTACACCGCCTCCTAAG 52840 32 100.0 34 ................................ CTGCCACAACCAAAGCAATGAAATGTCTGCTGCT 52906 32 100.0 34 ................................ ACAAAACAAAAGATGCCGGATGCACAGTTACAGG 52972 32 100.0 34 ................................ TGTGAGGATAGAAAATAAAATAAACGGGAACTAC 53038 32 100.0 35 ................................ GACTGGTTTAATACCATAAGGGATGAATATGCAAA 53105 32 100.0 35 ................................ TTAAAAAAGGGCGTTTGGAGTATGGACAAACAATA 53172 32 100.0 33 ................................ TGATTGCCTGTGGTGCATTGAGGACTGCCTCAC 53237 32 100.0 35 ................................ AAAATATCCCTTTGCCCTTATATCAGCAAATAAAT 53304 32 100.0 34 ................................ TGGTTCTGCGACATATATGTGTCATAAGGATCAC 53370 32 100.0 35 ................................ TTAAAACAAATACAGGAGGTAATTTAAATGTCCAT 53437 32 100.0 35 ................................ ACACCATCAGTCATTTATATAGGCACGTATAACGA 53504 32 100.0 34 ................................ GCCCCGGTCCAAACTTCCGCATGACTGAATTAAA 53570 32 100.0 33 ................................ CACAATGAATTTAACTGTATTGCACAAGCCTCA 53635 32 100.0 35 ................................ ATGATAGTGACTATATCTCCCAGATCGTAGTCAAT 53702 32 100.0 34 ................................ TTTTCAAGTACGCGGGAACCAGAGCGTGTGGAAA 53768 32 100.0 34 ................................ GTCACGAAACCAACAGAATACGTGGTTTCAGTCA 53834 32 100.0 34 ................................ CTTTAGCATAAGCAATACCAGCAGAACCAGTAGT 53900 32 100.0 36 ................................ TCGATGTACTGAACTTCGGTCATTACTTTTGCTAGC 53968 32 100.0 34 ................................ GATTTGGTAGGCTTCCTCAACCCATACAAACGCC 54034 32 100.0 35 ................................ CAAAATCGAATGTCATCATCAAATTGGGTACGGTC 54101 32 100.0 33 ................................ GCTTCTATCGCTTATGAAATGTCAAAAAGTGAG 54166 32 100.0 35 ................................ TAGAATATATCTCACAGGTGATGAAGGATTTCCAA 54233 32 100.0 34 ................................ CTCTTGGATGGGGAGATGGGGTGAGGCGAGAATC 54299 32 100.0 34 ................................ ACGCGGTCATGGTATGGAGTAGGAGATTTTCAGA 54365 32 100.0 34 ................................ AGTCTACATATACACAAGATCAGTTGGATCAAGT 54431 32 87.5 0 ...........T.........C..T.....T. | A [54458] ========== ====== ====== ====== ================================ ===================================== ================== 75 32 99.8 34 ATCGCACTCCTCGTGAGTGCGTGGATTGAAAT # Left flank : AATATCCGCCTTTTTTATGGAAGTAGGTGAATTGATGCTTATTTTAATCACATATGATGTCAGTACATCGAGTGAAGGAGGAACAAAAAGGCTAAGAAAAGTTGCTAAAGCATGTCAAAATTATGGTCAACGGGTACAGAATTCTGTTTTTGAATGTATAGTAGATGCTACTCAATATGCAATATTAAAAATAGAATTAGAACAGCTTATTGATCAAAAAAAAGATAGCCTTCGCTTTTACAATTTAGGTAATAATCATAAAACGAAAGTAGAACATTTTGGGGTAAAAGGTTCATTGGACCTAGAAGATCCGTTGTTTTTTTAGATATTGGTGCTAACCTCAAGCAAACATGAAATTAGTAGGGGGTTAGCACTGAAAATAGCCTTTTATTTAGGTGAATAGTTGTATTTCAATATCCTTTAACCCCAGAAAGTGGTAATAATAAATCGGTTTTTAGATCTATTAAGTACAAGTGTTCCTGTTTTTTGCGAAATTCGCT # Right flank : TTAAAACGGTCCAACTATTAAATAATTGGATAGCTGCACCCTCATTATTTCATTATGCCCGTTTTTGTTTAGCTCTTTGAATTTTCAGTATTATTAAGTGATTTTAATTTTGAAGACACATTCATAGTATCAAATTTTGCAATATCTTTTTTTTTCATCATCTGTAGAAAAAGATTGTTAGACACCATATTTTCGATCTGCTATTCTACAACTAAACCATATGTATAAATCACCCATACCCCCAAATATACATAAACTACACTAAAAAGAAAAAAGGATGTGTCTGCAATTAAAAAGTATTATGTCTCTGCAAACACGGCGGAAGGCTTTATCAATTTGCTGCCTTCCAATGTAAAAGACCTTAAATATGTCATTATCCTTAAACATCCATCGTATAAGTTAAAAACTGCTGTCATCAAAAAAGTAATAGAAAGGCATAAAGACAATGAGTTGGAAATACTTTTAAGTCCTAAACAAAAGGCGTACTTGGATGGGGTTAT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCACTCCTCGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTTCGTGAGTGCGTGGGTTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.70,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //