Array 1 6500-8358 **** Predicted by CRISPRDetect 2.4 *** >NZ_CYHE01000016.1 Pannonibacter indicus strain DSM 23407, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 6500 29 100.0 32 ............................. CCGAGAGGCTGTATCAGGGCGTCTATCACGAC 6561 29 100.0 32 ............................. AATGCTCATTCTGGATGGCCCCTATCTGTCGA 6622 29 100.0 32 ............................. GCCGTGCAGTCGCGCATCAGCCAGCTGGGCAA 6683 29 100.0 32 ............................. GCATGGCCAGAAGCTGCCAGCGCCTGCGAAAA 6744 29 100.0 32 ............................. GCGAGAAACTGCGGGCATCGGGCTTTCGGGTC 6805 29 100.0 32 ............................. CGCCCGCGCCGCATTTTCGTTTGCGCCCATGG 6866 29 100.0 32 ............................. GCGAGAAACTGCGGGCATCGGGCTTTCGGGTC 6927 29 100.0 32 ............................. CGCCCGCGCCGCATTTTCGTTTGCGCCCATGG 6988 29 100.0 32 ............................. GCCCAGAGGCGCCGGACCAAAACGGGTGCCGC 7049 29 100.0 32 ............................. GAAACGGATGACTGGTGCCGCCTCGTCAAGAA 7110 29 100.0 32 ............................. ACCGGTGCCGCGCTCACCGAACATCATCTTGC 7171 29 100.0 32 ............................. TGGGTGGCCATTGCCAGCCTTGTTGCCGCTGT 7232 29 100.0 32 ............................. GTAGGGGTTGCCCGGCAGCACCTCGCCGGGCA 7293 29 100.0 32 ............................. CCGGGAGGATATCCGCGCCTCCTGGCGGCAGG 7354 29 100.0 32 ............................. TGGACAGCATGTGGGCCGCCGCAGCGCAGCTC 7415 29 100.0 32 ............................. TTTGCGTGCCAGCCATTGCCGGCAGCACCTCT 7476 29 100.0 32 ............................. CCAGATTGATCACCCGGCGCTCGCCCTCCCGC 7537 29 100.0 32 ............................. CTTCCCGCCCGCCACCTGCGCTGACTGCCTCC 7598 29 100.0 32 ............................. CCGCAGCGCGACACCTGGATCCAGATGATGGC 7659 29 100.0 32 ............................. CTTCCCGCCCGCCACCTGCGCTGACTGCCTCC 7720 29 100.0 32 ............................. CCGCAGCGCGACACCTGGATCCAGATGATGGC 7781 29 100.0 32 ............................. CAGACGTTGAATGCGGCCAATTACGCTGCCGC 7842 29 100.0 32 ............................. GGGCAGGTCACCAACTCGCCGCATCTGACGCT 7903 29 100.0 32 ............................. GCGCGGGAGCAGGCAGAGGCCATGCTCGCTCT 7964 29 100.0 32 ............................. GTGCGCGGCACCTGGGCGGCGCGGTGCAATGT 8025 29 100.0 32 ............................. TCGGCATCCGTGGCGGCGAGTGGACGGCGCCC 8086 29 100.0 32 ............................. TTGCTCTAAATGCTCTGCCCCTGACATGGAGC 8147 29 100.0 32 ............................. CACCATCACAATCCCGCACCGGCAGGTTCTGC 8208 29 100.0 32 ............................. AGCGGAACGAGGAAAGTGTCTGGAGCGAGGCC 8269 29 100.0 32 ............................. ATCGCGCAGGCCGTCTCTCAGTACAAACAGCT 8330 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 31 29 100.0 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : CCCTGCGTATCGCCCGGATGCAGGGCGGCACACTGGTGCCATTGGCCGCGCCCGGCGGCCCCGGTCCTGAGGCCATGGCAGAGGCCTGGGCCCTGTCGGCCCTCAGCTGCCGCGCGGCGATCCTGACCCGGCAGGGCAGGGACGCGCCCCCGGCACCGGATGCGGCAGAAGAAAAGCGCCGCGCCGCCGCCCGAGAAACCCTGCGCCGCAGCTGGCCGGAGTTCGAGGCCTCCATCGTCATCGCCATTCTGGGGGAGGACGGTCATCTGGACGCGGGCCCGGACTACAGCCGCACGCTCTTCTACTGCCGCAGGCGCGGTCTGACGAACGGTGCCGCGCGGGAATGATCCCGCACTGCCGGGGCTGCAATCAAGCCGGGTTTTTCTTGCCTGCTGCAGCCCCTTGCGCCACTCTCCAATCCGCCCTCCGAAAGCCCCCGAATTTCCGGTAGCTTTCCGCTCTTTGAAATTCTATTTTCAGATCAATGCTCTCCAGCAAGA # Right flank : GGTATGAAGGAGCACGGCGAGCCAGTCCCCGAACCGCGCGAACTTCCGGCGTTTTTGGCGGATGACACATTGGCGGAATGGCGCAGCGGGGCAACCTTTACCTCCGTGCCACTCGCTCCGGAATCCTGACGTGCTGCGCTGCATTCTGCAATCGAAGATTGATCTTCCGTTACGTTTATCATAGGGTTGAAGCTGGCGAATGTTTGCATCCTTGAGTGGGGGAGGTGCGGCATGGGCAGGCTGGTTTGGTGGCTGGGTGTTCCCGCCGTTTTCGGTGCGGGCGTCTTTGCAGGCGTGCTGTTTTCGCCGCCACTGGGCACGGCGCTACTTGAGGCGGCCGGGCTTGATGGCGCTGGCCGGAAGTCATCGATCGATCGCATAACGACAGGTGCAGTTGAGCCCCCTCCGGGGGGCGGCGGACGTGCGCCTGCCAGCGATGAATCTGTCACTATTGCCCAACTGATGGCGGGCATTTCGCAAACGGCGTCTTACGCCTACCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [60.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 16573-16845 **** Predicted by CRISPRDetect 2.4 *** >NZ_CYHE01000016.1 Pannonibacter indicus strain DSM 23407, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 16573 29 96.6 32 ............................A AGGGCCGGAGCCAGATGGCCCAGCATCTGGCC 16634 29 100.0 32 ............................. GCGCGCTTGAGCGTGTGCACGAGGCAGGCGCC 16695 29 100.0 32 ............................. GCCTATCTGCCCGGTGGCGCCACCACGTCCAT 16756 29 100.0 32 ............................. GTCGCCGACCGCGCGCACGCTGTCGAAAGCCC 16817 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 99.3 32 GCGTTCCCCGCACACGCGGGGATGAACCG # Left flank : CGGACTATGCCATCGATCCGGCCTTCAAGGATCCCTCTCCCTCCGGCGATGCGGGGCACCGGTCATGATGATGGTCGTCACCACCAATGCTCCGCCCCGGCTGCGCGGGCGTCTCGCCGTCTGGCTGCTGGAGGTGCGGGCAGGCGTCTACATCGGCACTTACTCGGCCCGCACGCGCGAGATGATCGCCAGTCAGGTGGCGGCGATGATTGAGGATGGCGACGCCGTGATCGCCTGGACGGCCCCCACTGACGCGGGCTTCGACTTCCAGACCTATGGCCGCAACCGCCGCATGCCTGTTGATTTCGACGGCCTGCGCCTCGTCGCCTTCCATCCGCCGGATGCCGGAAATCCGGGGCCGGGCGGGCCCGGATCAGGCTGATAAAGGCCGGCCGGACCCGTCATTCTGCCCGTCTCCGGCCCCCCCTCAAAACCGCCCCAAAACCGGTAGCTTTCCGCTCTTTGAAATTCTACAATAAGATCAATGATCTCCAGCAAGA # Right flank : GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGTTCCCCGCACACGCGGGGATGAACCGTTGGGCCTTGGCCCATGCGGTGGCGGCGCCATGCGTTCCCCGCACACGCGGGGATGAACCGGCC # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-14.30,-14.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.41 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 17861-18683 **** Predicted by CRISPRDetect 2.4 *** >NZ_CYHE01000016.1 Pannonibacter indicus strain DSM 23407, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 17861 29 100.0 32 ............................. TGATCGTGCGGTTTGATCCCGACCGGCTGCAC 17922 29 100.0 33 ............................. GAGGGATACGGCCAGCTGCACAGGAGGATCGGT 17984 29 100.0 32 ............................. CGCGGCTGCAGCGAGTGACCGCAGATGCGGAC 18045 29 100.0 32 ............................. GCCAGGCGTGCCGGGGCGATCACCGAGGAGCT 18106 29 100.0 32 ............................. ACAAGATGCGGCGCACCAGCGCCGCCCCGACC 18167 29 100.0 32 ............................. AGTCCATCGCAGCTATCACGGATGACGCAGCC 18228 29 100.0 32 ............................. GCTGTCAGTTGCTGCATTGATTTTCCTCACTT 18289 29 100.0 32 ............................. CTGGCGCAGGGGGTCGGCAACGTCATGTGAAA 18350 29 100.0 32 ............................. CCGGGGGGGGGCACCCACGAGCGCGAGCGGGT 18411 29 100.0 32 ............................. GGCGCGGTCCAGATGGAAGAGCTTCGGCAACA 18472 29 100.0 32 ............................. TGGGACTTCGCGCGCAGCCTGACCTATCGGAT 18533 29 100.0 32 ............................. TCATCGTCAGATTTGATCCCGACCGGCTGCAC 18594 29 100.0 32 ............................. CCCCCGATTGGTCATGAGTATTTTCAGGGCCT 18655 29 93.1 0 ..............T...........A.. | ========== ====== ====== ====== ============================= ================================= ================== 14 29 99.5 32 GCGTTCCCCGCACACGCGGGGATGAACCG # Left flank : GTGCCGGTCCAATGCGTTCCCCGCACACGCGGGGATGAACCGTTTGTTCGGAGATATACACATCGAGAACCCCCGCGTTCCCCGCACACGCGGGGATGAACCGCCGCCCATTGGTCATGAGTATTTCCAGAACCTGCGTTCCCCGCACACGCGGGGATGAACCGGCGTATTTGGTGCCTTATCTGGCGTTTGAGCGGCGTTCCCCGCACACGCGGGGATGAACCGACGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : GAGAGGTTCTTGACTGGCGTAAATTCTGGCTTGAAGGCCGTTCTGGATTGCATTAAGCCTTAGATCAGGAATGGCCAGCTCAGCTCCACGGGCGGGTGCATTTATCATGTGTCTGCTCAATCCTGCTGGAATTAGCCCAGGTGGACGTGAGCCAGAGGGCCATTCCGTTCTTCTCTCCCAAAGCTTGCATTGCCCGAGGTTCGCCGCTGTGGGGTTCTGGTCTGTTGCTGTGACCGGAGCTGAGCGGTTGTTTCCGGCAAGTGCCGGGAGCCTTGCTGCGGGCTGAGGCTGGAAGCCAGGTTTTCCGGCTGCGCATCTGCCTGTTCCAGCGCCAAACTGCGCTCCTCAACAGGGGATGGGGCGTAATCCGGGCTCGACAGGGCGGGTGCGGCGCGGCAATGTCTGGCGCATGTGCCGGCGGGGTGATGCCTGATGCGGCGGTGATGACGTTGTTCCGGCGGAAAGTCCTGACTTGATTGCTCTGCGCCCAATCCTGAGTG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //