Array 1 488449-487749 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018836.1 Vibrio gazogenes strain ATCC 43942 chromosome 2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 488448 29 100.0 32 ............................. CAAATTGACTTTCACGCGCCCATTCAATTTTG 488387 29 100.0 32 ............................. CCAATTATCACAGGGATATCCATTGACACCAG 488326 29 100.0 32 ............................. GTGGTGAGGCATATTAAGGGCAGTGATCGCAT 488265 29 100.0 32 ............................. CCAGCGGAAATGCTGGAACACATTCTTACTGC 488204 29 100.0 32 ............................. CCACACGGACTCAAGGCAATACTTATTCAAAA 488143 29 100.0 32 ............................. GGAGAGGCAAAAACATACGAGTCGTTTGTCAT 488082 29 100.0 32 ............................. ATTGAAAGCTGAAAACAGTGATCAGCCCATTG 488021 29 100.0 32 ............................. TAAATGATTAACAGCGAGCCATAAATGATGAC 487960 29 100.0 32 ............................. GATATGAAAAAACCCCATTTTCGTCTGCATCA 487899 29 100.0 32 ............................. GCTACAAAGGTGTATGGCAAATCTTTGGTAAA 487838 29 100.0 32 ............................. AATAAACGCAGATAGGAAGCACAGATAGATCA 487777 29 79.3 0 ......................CATGTG. | ========== ====== ====== ====== ============================= ================================ ================== 12 29 98.3 32 GTGTTCCCCGTATGCACGGGGATGAACCG # Left flank : CTGAACCTGAATCTTACGGTGATGCCGGACACAGGAGTAAATAATTGTGAGTATGTTGGTTGTTGTCACAGAGGCCGTACCACCCCGCTTACGTGGCCGGTTAGCCGTCTGGTTATTAGAAGTGCGTGCTGGGGTGTATGTCGGAGAGGTCTCTAAACGAGTTCGTGAGATGATTTGGGAGCAAGTGATGCAACTGGCGGAAACCGGCAATGTGGTCATGGCGTGGGCCACCAATACTGAATCTGGTTTTGATTTTCAGACATATGGCGAAAACCGCCGGGAGCCGATTGATTTTGAGGGGTTGAGGTTGGTGAAATTTAAGCCAATCGAGAGTGATATGTAAGTTGCTATAAAGACAAGGACAGGCACTCTGGCAGATCACCGGACACTAGATTGTGTGATGATTTTCGGTCAGATCGTTAAGCATCAAAATAGGGAAAAATGTTGGTAGATTGTTAACGTGGGGATTTATTTATATAAATCAAATGCCTACAATTAGA # Right flank : AGTGGCACGCAGTGCATACCGGTGCCACTCCGCTCGTTTTCAGCCTATCGCTGATTTACTCATCGAGCATCATTTCTTCTTTCTTCAGATTAATCTCATCAAAGGTGATCAGATTATTGAGGTACAGGAGTACCTCTCGCAGTTCATTTTGATCGACACTGGGGAGCGTATTGGTGATCAGACAATCAATCAGATAGCCGCGGGCGGTCAGATGTAGATCAGGATTCGGTTGTTTGTTTTGCATCATAAGTATTCTCTTTGAAAGTGAATGGATCGCCACCAGATAAGATGGCATTGATGTCCCTTTGAGAGTCATACAGGTTCCTAATCCTGACACCGGATTTTTCGGTGCCTGTGCAGAGTAAGCAGCATCGGGTTTGTTGACGAGAGGTCGCAGTGCAAAACGCGTGTGGTATCGTGAAATCCCATACTTTCCTAATACTTGGTTTGTCATTTTTTTGCGAGTGATTTCAAAGACATTAGTGCTCAGTGCGCCAGTC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTATGCACGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGTATGCACGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.70,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 497775-497563 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018836.1 Vibrio gazogenes strain ATCC 43942 chromosome 2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 497774 29 100.0 32 ............................. CTGAATTGGACAATGCTGGGGTGGATTATGTC 497713 29 100.0 32 ............................. CATAACAGTAAGACGATCCTTGCTCGCTTGTT 497652 29 100.0 32 ............................. AGCTCGCTAACCGTTGCCTCGGCGCTTTCTTG 497591 29 93.1 0 .........................G..A | ========== ====== ====== ====== ============================= ================================ ================== 4 29 98.3 32 GTGTTCCCCGTATGCACGGGGATGAACCG # Left flank : AAAAGGAACTGGGCAAATTTGCAGAATATGGTTGAAATCGGCAAAATTAATCGCGCATCAAATCACTGCACCACTGTTTTTATTCTCCTAGTCTCCAGCCCCGAACTTTGACGCACAATCGATTTCTCCGATTTCAGCGGCATTGGTGCTCTGTGCGTCAGTGACTCTTGCCAAGATGCAAGCGTAACCAGAAAATCTTTTTTGTTTGGCTTGGTCACGCGTTGTCCAGAACTGCCTTTACAGGCGTCCTGCCCGGAAAAGCCTAACCATTCTTCCATGAATGGTTTTCTTTGTTCAGAATTTTATTTGAATTCAGAGAAACATATACAAAGCCAATAGGATCGATGTACTCAGGGTAAAAATTCATGGATGAATTAATTGCACACTAAACCTACGATAGCTTCATAACCGACCATATTGATAACCTTTAAAACCACCTCCAAATGTTGGTAGATTGTGAATGTCGAAATTTGTATTTATAAATCAAATGACTACAATTA # Right flank : TAAATATCGTCGTTCCAGTCCTCATTTAGTTCGCATTCCCCGTACATTCGGGGATAAATTGAGTGCTGACAAACATGATTATTGACTGTGTTGTTATTAATTGTGTAAATAAGCTTGAACTTCTTCTTAGTCTGTTATTTTTCCCGTATTTAAAACAAGAGGTGTGTTATTTTTGATAACATTCAATTGATTACTGGAATCAACCTCTCATGGAAGAACCTGCCTACTTCTTGTACTGGGGCAAGGCGAGTCAAGCACTGACATATCATGGGGATGACTACCATCTTTTGCCTTATCATTGTCTTGATGTAGCTGCTGTCGGGCAACAACTATTACATCCTGAAAAACCACTCACCGGTGAGTTGGCTGCATTTCTGGGCATTTCACCAAGTCAGCTCAATCGTTGGTTTACTTTTGTGCTGACGTTACATGATTTAGGCAAGTTTGCCTCCGCTTTTCAGGCGCTACATCGGCCACCTGATGGTTCATGGTTACCACAT # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTATGCACGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGTATGCACGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.70,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 377317-377104 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018835.1 Vibrio gazogenes strain ATCC 43942 chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 377316 29 100.0 32 ............................. ATTGTCACTGGAGGATAGGGCTAACCTTATTA 377255 29 100.0 33 ............................. CGGCTTATGATTTGTTCATAACAGCATTCCCAA 377193 29 100.0 32 ............................. AATGTTTGAACGCCTTATGAATAGAATGAAAA 377132 29 93.1 0 ......C.....................T | ========== ====== ====== ====== ============================= ================================= ================== 4 29 98.3 33 GTGTTCTCCGTACACACGGGGATGAACCG # Left flank : GGGCGAATTGGTGATCGTAAGGGATGGTTTCGTACATTATTTGACTCCTGGATAGTGATCAAAATAATTTCACCACAGGAGTTCCTACGCTCGGGTGGTGAACTGGAACAAGGTGTAGGAATGCCGTAATCCAGGACACGGCCAGCCAAAGCTGCCTTGCCCAGCTCACCATAATTCAGATGTGCTGAGGCCGCATATAGTAAAAAACCAACGTAAAGTTAGCAACCTATAATGTCTGGATAGATATCAGCGGGTTCCTACGCCCGGCACCGGATTTTGCCAGTGCAGAGCGTAGGTTATCTGTTTTTGGGAAAATAAAAGTATGAAAAAAGTATGAGATTTTGGGTGTGGGTTCTCAAAATAATCAGCCGATGAGCGTCTGGAATTGATAAAATTCGACCCAGTTGCAGCGCTTTGAAAAGGTGGATTTTGCTCTTTAAAATGTTGGTAGATTGTTAATGATGAAATTTCTTTTTATTGATCAATGATCTATATTTAGA # Right flank : GACTGTTCCACTTTGTCAGTGCCATTACCAATGAGCGGGGCGAAACCCACAGTATCGGCTATTACCCGAATGGTTTGGTACAGACGGAAAACACCTTCGACGGTCGGATGTTCAGCTATGAATACGACCTGCTGGGACAACTGACCAAGAAGACCGAAACCGGCACCGAAGGCACTGAGCTGACGACAACGTTTGAGCGGGATGAGATGGGGCGTCTGGTTAAGAAGACGCTGGCCGATGGCAGCAGTATTGACTACCGCTACGATGAATACGGCAATCTGACCGAAGTGGATGACGGCGAGCGTCCGCTGGTCTGGCGTTATGACCTGATGGGCCGGGTGACTGAAGAGCATCAGGACTGGGCCTCGAACTATTTTAGCTATGATGCACTGGGGCAGGTTGAAAGCTGGCAGCTTCCCGATGCCAATGTGCTGAAGTATCAGCGTGGCAGAGGCGGTGTGCTAAAGCAGATTGACCTCAATGACTCAGTTTTGACACAG # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCTCCGTACACACGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGTGCCCACGGGGATGAACCG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.80,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 381948-381675 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018835.1 Vibrio gazogenes strain ATCC 43942 chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 381947 29 100.0 32 ............................. TCTAATTCGCTCGGCCTCTTCTGCTGCTTTGC 381886 29 100.0 32 ............................. TGCAAAACTATCACGGACAATACAGTTAGCCA 381825 29 100.0 32 ............................. CGGGATAAGCCGGATTTGGCCGGGCTTTGGCC 381764 29 100.0 32 ............................. TAGCCGGCACGGATTGGTCGAGGGTTATCACC 381703 29 96.6 0 ............................T | ========== ====== ====== ====== ============================= ================================ ================== 5 29 99.3 32 GTGTTCCCCGTACACACGGGGATGAACCG # Left flank : GGGCGAATTGGTGATCGTAAGGGATGGTTTCGTACATTATTTGACTCCTGGATAGTGATCAAAATAATTTCACCACAGGAGTTCCTACGCTCGGGTGGTGAACTGGAACAAGGTGTAGGAATGCCGTAATCCAGGACACGGCCAGCCAAAGCTGCCTTGCCCAGCTCACCATAATTCAGATGTGCTGAGGCCGCATATAGTAAAAAACCAACGTAAAGTTAGCAACCTATAATGTCTGGATAGATATCAGCGGGTTCCTACGCCCGGCACCGGATTTTGCCAGTGCAGAGCGTAGGTTATCTGTTTTTGGGAAAATAAAAGTATGAAAAAAGTATGAGATTTTGGGTGTGGGTTCTCAAAATAATCAGCCGATGAGCGTCTGGAATTGATAAAATTCGACCCAGTTGCAGCGCTTTGAAAAGGTGGATTTTACGCTTTAAAATGTTGGTAGATTGTTAATGATGAAATTTCTTTTTATTGATCAATGATCTATATTTAGA # Right flank : GACTGTTCCACTTTGTCAGTGCCATTACCAACGAGCGGGGCGAAACCCACAGTATCGGCTATTACCCGAATGGTCTGGTACAGACGGAAAACACCTTCGACGGTCGGATGTTCAGCTATGAATACGACCTGCTGGGGCAACTGACCAAGAAGACCGAAACCGGCACCGAAGGCACTGAGCTGACGACAACGTTTGAGCGGGATGAGATGGGGCGTCTGGTTAAGAAGACGCTGGCCGATGGCAGCAGTATTGACTACCGCTACGATGAATACGGCAATCTGACCGAAGTAGATGACGGCGAGCGTCCGCTGGTATGGCGTTATGACCTGATGGGCCGGGTGACTGAAGAGCATCAGGATTGGGCCTCGAACTATTTTAGCTATGATGCACTTGGGCAGGTTGAAAGCTGGCAGCTTCCCGATGCCAATGTGCTGAAGTATCAGCGTGGCAGAGGCGGTGTGCTAAAGCAGATTGACCTCAATGACTCAGTTTTGACACAG # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTACACACGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGTGCCCACGGGGATGAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.70,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 1878673-1879047 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018835.1 Vibrio gazogenes strain ATCC 43942 chromosome 1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================= ================== 1878673 36 97.2 32 ...................................C ATTCTGGCCACAATATTAAGCGTCCACGTAGA 1878741 36 100.0 33 .................................... AGTTTATTGTTGACAGTAAAAATTATTAACAAT 1878810 36 100.0 31 .................................... CAACAACAAAAATTCTTTGTTCTTTCATAAA 1878877 36 100.0 31 .................................... GTTCATAGTGACCTCTCATAAAACTTTTGGT 1878944 36 100.0 32 .................................... TTAAACATTTCTGTATGAAAAGGTTTCACTTT 1879012 36 88.9 0 ....................G............GGG | ========== ====== ====== ====== ==================================== ================================= ================== 6 36 97.7 32 ATCGGAAGACACTGGCCGAGACAGGCCGTTAGGACT # Left flank : CTGCAACCAGCAGTAAAAGCACCAACCCCCAACGAATCACTATTGTTTGATGATTAATCATGAATAATTTATCAGTACCCAGAGCCAAACTGCAGATAAAATACAACTTTATTGCAATAATCATTAGTACGCATATGCAAAAGGTTTGATTGGTTCACAAAAATATTGACTTCTATCCGATTAATGCGCTGAATGGGCAGTCTCCCGATATTGATGTTCAGCCCCCATAGAATAACGGTCCAAACTTTTGGTGTGCTCCCGCGAGCCCATCAGCAGATCGGTCAGAGTGCACAATTCAGTATGAAAACTCTGCACGCCTCGTTTAACGCTTTGAATCCAAACCAGAGCCGATGATATAATCAACACTTGTCTGACGAGATCGGCAATTGGCCGATCCCTCCCTGAAAAGGGCCAAAAATGAGGTTTTTCTATGTATATTTATACAGATCGGCCAAATTGCTTTGCTCAGCCCTTATATATCAAGGCTGCCAGAGGGCGCT # Right flank : GCTCAACAGATAATGATCGAATCCGGCCAGTCAGCAATGCGACCTTCTCCGAGAACGTGAGAATTCATCCGGCAATTGGCACACAAACGGTAAAACCGAACCTTGTCTGTCGCGTCAAGCTGCCGGTTGATTTTTTCTGTAATCTGTTTGAGCTGGCGAGGTGTCTTGACCGCAATTTCAAATACCGATTCCTGCACGCGGTCACCGTAACCGAGCAGCACTTTTCCGACGTTACGGCGCACCTTGTCGTCACTGATATCAAAACAAACGGCATAGATAATTAACGGCTGTGCCATGCTTCAAATGCCTCCCCGGTCCGGATACTGGTAATGTAACGGGTAATCTGCTGCTGAATATGATCGATGATCGAATACCCCGACAGCGTACCTGCCGTTTGTTGTGCGTTCAACGACTGCAATAAGGCAGTAAGATAGCGCTGACGTCCCTGACTTAACAACCAGAGACCCCCATCCCGGGATTCAAAGTCAGCTTCCGTCAGA # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGGAAGACACTGGCCGAGACAGGCCGTTAGGACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.60,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 4 1892280-1892521 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018835.1 Vibrio gazogenes strain ATCC 43942 chromosome 1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================= ================== 1892280 36 100.0 33 .................................... AGACCTCTTTAGGTTGATTGAACAAAACGTTAC 1892349 36 100.0 33 .................................... CTTATCCATTCCACAAACAGCAAAAGAACTCAT 1892418 36 100.0 32 .................................... TTTCTTACAAACATGTTTATGCATTCCTAGAT 1892486 36 86.1 0 G..............................C.TTG | ========== ====== ====== ====== ==================================== ================================= ================== 4 36 96.5 33 TATCGGAAGACACTGGCCGAGACAGGCCGTTAGGAC # Left flank : CGCCTCATTTCGGCAATTGGTATCAAGACGGGGCAACAAAAACGGGTCAGTTAAACACCACACCAAATGACTGGCATGACCCAGTCCCCATCCCATTTCTGGCGCTGGAAGACTTTGAACTGCAACTGGCGGTACTACCGCGTCCCGGTTCAACAGAAAAAGCCCCCACAGGAGAATTGGCTTTTATCACGGATATGCTCTGTAGTGCCTTATCTTATCAAGGTGCCGGTGCAAAAAGCGCGGTAGGTTATGGTTATTTTGAAGTATCACCCAGGGGATCGGGCAAAGAGCACAATTTAACATGAAACCTCTGCACGCCTCGTTTAACGCTTTGAATCCAAATCAGAGCCGATGATATAATCAACACTTGTCTGACGAGATCGGCAATTGGCCGATCCCCCCCTGAAAAGGGCCAAAAATGAGGTTTTTCTATGTATATTTATACAGATCGGCCAAATTGCTTTGCTCAGCCCTTATATATCAAGGCTGCCAGGGGGCGC # Right flank : GGGAGGATTGTACTTTTCTGAGGGAAAGAATAATGGCATCTGACATGCAGTCAGTATTGATGGCAGGACATGCAACAGACTGCCATCCCCAATTGACCTCGATATTGACTGCTATCGGGGGCTTCGATGGAATGGCGGAAACACGAGCGGCTCAAGACCCGCACTATGAGCGTCTGCGAATGATGTCGAAGCTAAAGATCTCATCGGAATAGTAGTCTTCGGTATAACAAAAAACTTCGCCTGAATCACTATAATAGGTTTCTTCTAGGAGAATGAAGGGTTCCAGCGCCACGTCCATTTCCGGGATATCTCGCTGTGTCAGGACAACGGATTTTATTTTGGTTTTCGCGTAAGAAATACTTTTACCGGTCTCTTCAAGATAATCGAACAGAGAGCCACAGAGTGCATCATCACTCGCATGTTCAATGGCATGCAGCCTAAAGTGATGAATATTAAACACCGCTATTTTGTCATTGGCATACCTCAATCTTTTGATCTCA # Questionable array : NO Score: 2.68 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TATCGGAAGACACTGGCCGAGACAGGCCGTTAGGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.60,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0.27 Confidence: MEDIUM] # Array family : NA //