Array 1 1816254-1816581 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018259.1 Acinetobacter bereziniae strain XH901 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1816254 28 100.0 32 ............................ TGTTTGACGGTTAATTCGAACACCACCCTCAA 1816314 28 100.0 32 ............................ TGTTTATGGGGACGTTACTTGGGATGGTGAGA 1816374 28 96.4 32 .........C.................. AAACCGCATCATCTTCTTGCTCAAAACGTAAA 1816434 28 92.9 32 .........CT................. ATCTAGAAATGAGTAATCAAGCTGGTCAGATT 1816494 28 92.9 32 .........C.C................ TGAATATAAAAATGAATTTGCGGCTGCTGTTG 1816554 28 89.3 0 ...C.....C...G.............. | ========== ====== ====== ====== ============================ ================================ ================== 6 28 95.2 32 GTTTACTACTGTATAGGTAGCTTAGAAA # Left flank : GCTTTAAATGATGCCAAGTTTAGTAAACGGATCTCAGATAGGCAATTTAATTTAATTCAAACAATTATGTTTGTAAGAGGACAGACGAAAAAGTTTTTTAACCAAGCTGAGTTATATCGAATACCACAAATCCAAGTTTTATATACAGGTAAAACAGAACGTACTTTTTATCGTGATATTGCTAGATTGGTTGAGCTAAACTTTTTAGATGATCAAGATGGATTGATTGTTGTTGGCGAGTCAGTTTAAATATGATGAGTTTATAAATTGCTTGGCAATATTTTATAAATCTTTTGCAACTGAGGCAAAAGTAGGAAAATTTGGATTGTATAGATTTTAGTGAAACAGAAGATAATTCTAAAATTTTACCCCAATATTTTTTAACTCTTTAACAACTGAATAAAATCAATAAATTATAATCGTAAATAGAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATTATTTTATTTTTTGTTTTAAAGTTATA # Right flank : AAAGATTTCTTCATTCGTAATTTGAATTGTTCAAAATTTGATTTATATTCATTTCTGTTTTATTATTTGCTTGGAGACGCCGAGTAGCGGTAACTACCCGACGCATTCTGTTAGTGAGCTGATTGAGAAATCAACAACAATAACAGAATGACAACGATGATTAGACAAAAGCGCATCGTAAACCTCCAAGGATTAATGTAACGAAACACCGTTACAGGTCACCCTAGCCCCAATGACTAGGGCACGTTACTGTAACACAACAAAAAGCGCCCATGGGCGCTTTTTGTTGTTTAAAGAGATGAGGTTAACTACATCCTATCCAGCGTTTGTCTTCTTCTTCAATTACCATATTCACTTTTTCACTTCAATTCAGCGCGATCATTTATTTTATCTGTTTGGTACACTGAGAGACGTCAAGAGAACACCTTCCGTATAACTTGATCATTCTCTAACAAGCATTCACTACCATATAGGTAGCTTAGAAACCTTACCAAAGCGAT # Questionable array : NO Score: 5.71 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTACTACTGTATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTTACTACCGTATAGGTAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [85.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1817038-1817545 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018259.1 Acinetobacter bereziniae strain XH901 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1817038 28 92.9 32 A.........A................. CCTTACCAAAGCGATATAAGCCATCGCACCGA 1817098 28 100.0 31 ............................ TTGTGGTAAAAATTAACTTAAATTTGATTTT A [1817123] 1817158 28 100.0 32 ............................ AGATTACGAGTTCTTGTTCTGATCGGGGCAGG 1817218 28 96.4 32 ...........C................ AATATGAAAGGTGGAGAATGTAGTCAGGGTGT 1817278 28 89.3 32 ...........C......C.....A... TTATGCGTTGTAACGCGCATTTTCATACGTTG 1817338 28 92.9 32 ...........C.....C.......... ATAAATTGCAATCGCAATTTCAAGCAGTAAAA 1817398 28 100.0 32 ............................ TTTATTTACAGCTTGATCAGCCTTTGTCGCAT 1817458 28 96.4 32 ...........C................ TTGCTAACATTTTGAATTGCCGAAAAGTCTGA 1817518 28 82.1 0 ...............AA.CC....A... | ========== ====== ====== ====== ============================ ================================ ================== 9 28 94.4 32 GTTCACTACCGTATAGGTAGCTTAGAAA # Left flank : TTTGCGGCTGCTGTTGGTTCACTACCGTAGAGGTAGCTTAGAAAAAGATTTCTTCATTCGTAATTTGAATTGTTCAAAATTTGATTTATATTCATTTCTGTTTTATTATTTGCTTGGAGACGCCGAGTAGCGGTAACTACCCGACGCATTCTGTTAGTGAGCTGATTGAGAAATCAACAACAATAACAGAATGACAACGATGATTAGACAAAAGCGCATCGTAAACCTCCAAGGATTAATGTAACGAAACACCGTTACAGGTCACCCTAGCCCCAATGACTAGGGCACGTTACTGTAACACAACAAAAAGCGCCCATGGGCGCTTTTTGTTGTTTAAAGAGATGAGGTTAACTACATCCTATCCAGCGTTTGTCTTCTTCTTCAATTACCATATTCACTTTTTCACTTCAATTCAGCGCGATCATTTATTTTATCTGTTTGGTACACTGAGAGACGTCAAGAGAACACCTTCCGTATAACTTGATCATTCTCTAACAAGC # Right flank : ATATAAACGCCTTAACATCTTAGCTAAATTTAGAAAATTACAAACGATATGGAATAATTTTTATAGTAAATAAAATATGATAATTTAAATGATAATTATTTGCATTATTAATTGCATTTGAATATTTGGTAAAATACAATGTGCAACAATTCTTACACAATCCCTCCGTAATTTAAGTTGCGTATTAACATGAATAAACAATTAACACTTCCAGCACTATCTCTCTCCATACTCTCAGCAATGTCAATTTCAACATATGCAAACGAGACTTCAGAAGACTCCTCCAAGCTTAAAACGATTGTCGTTACAGCAAGTAGTCAGGCGGTCGATGTTAAAGAGGCACCAGCTAGTATTAGTGTGATTACCAGTGAAGATATAGAAAAACAACCGGTGGGTAGTCTTGGCGAGTTATTAAGTAAAGTACCTGGGGTTACTGGTGGAATTAGTCCTACCAAAGAAGGATCTAAAATTAAACTACGCGGTTTACCTGACAATTACAC # Questionable array : NO Score: 5.57 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.59, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGTATAGGTAGCTTAGAAA # Alternate repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: F [matched GTTCACTACCGTATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 3182278-3181831 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018259.1 Acinetobacter bereziniae strain XH901 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3182277 28 100.0 32 ............................ ACAACTATTAAATCAATTGGTTAATCAGCAAT 3182217 28 100.0 32 ............................ ATAATTTGGTCGTCAATCAAAGCGTTGGGCGT 3182157 28 100.0 32 ............................ AGCTTAAAACAGGATAGCTAAACCAGTGAACA 3182097 28 100.0 32 ............................ TTAAAAATAAGATATGAGAAAAAAGACAGTGT 3182037 28 100.0 32 ............................ TAAAGTTTGACTTTTTTAATGCCATATTCTGA 3181977 28 100.0 31 ............................ AAAAAGTTAATTCAATTTACTGATATGGTTA 3181918 28 100.0 32 ............................ AATCATTTGCTTGAATAATTGCTCTGCAATTT 3181858 28 96.4 0 .....................C...... | ========== ====== ====== ====== ============================ ================================ ================== 8 28 99.5 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : TTTTCCAGAAACAGACTTGGAATCATACATAATTCAAAATTTTATTCTTATAAAAACAATAAGCACTATTTTTGATGAAATTTACGTTATAGCACTCGTTTTATTGAACTTAAATATCATATAAAAATGATCTTTTTTAGCAGTTTATTGAGTTGCAAAGCAAGTATGTATTCTCGTTTGCAAGATAAATTAAATTTTAAATATTTGATTAATAAATAAATTATTTTATATGAGGTATGTCATATGATTCTGAGGAGTAAATCTATTAGAGTTTGTATTATATACTGCTATAACTTGTTGCTGATGAGGCAAAAGGGAACAATTTTGGGAAATATGCTTTTAATAGAATTACGATTATTCAAATATTTTAACCCAATTTTTTTTACTCTTTAACAACTAAATAAAATCAATAAGTTATATTGGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTATTGTTATCACTTTATTTTTTGATCTAAAATTAT # Right flank : AATTGTTAAACCTCTCTGATGATTTTAAAAATTTATAGTTGTATAAATTGTTTATTTTATAGCAATAAAAAAAGCCCACTTGAATGAAGTGGGCTTTTAGAATTTGGCTCTCCAACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACCGACTGAGCTATTGGAGAATCTGCATGCGATTATAAGGATATATCACGAGTGGTCAAGCCTTTGATGTCATCTTTTCTTCATTTTTGACTTGTATGCTTTTTATTTAAACAAAAAAGATCAAAATTAAAAAAATGGGTTTGAGTGGTTGCAAAGCGAGAGCTGACTTGTTAGATTAAAAACATAAAGAGCGTTTAAGTTTGACTTAAACCGTGTGGATTTAACCAACTTGCCAGCACTAAAATGGCTAAATAGGAGACAGCGCGATGACGACGCTAACTATTTCTCAAATTTTTGAAAAATTTTCTTTTTATCAAGAAAACTACCTTTCTATCCTGCA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [83.3-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //