Array 1 187843-191431 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJMOW010000005.1 Chryseobacterium sp. LC2016-27 Chryseo_sp._LC2016-27_LCCC1652_contig_5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 187843 47 95.7 30 A........................................C..... ATGGGATATTATTTTTATTCCGCTGGCGGG 187920 47 97.9 30 .........................................C..... TACCTTTAGTTTCAGCAAACTTATATCAGT 187997 47 97.9 30 .........................................C..... AGGCGCAAAAGGGAAAATCTAAACAGTATG 188074 47 97.9 30 .........................................C..... TGCCAGAAGCAGAAGCACCATTATTTCCGC 188151 47 97.9 30 .........................................C..... TCTTCGAAGTAATCTTTCATTTTCAAATAA 188228 47 97.9 30 .........................................C..... GAAATCATTCATTGGACAGGTCACGAGAGT 188305 47 97.9 30 .........................................C..... TTTGCGCATTCGTTTCTACGAAGGAAAGAC 188382 47 100.0 30 ............................................... ATTTAGCGACTTGTAATCCTTCAAATCCTG 188459 47 100.0 30 ............................................... TCAAAAGGTAAAAATTGTATATCGTAATAA 188536 47 100.0 30 ............................................... CGAACGCATCACCGATTGTTCCAACTACTT 188613 47 100.0 30 ............................................... CTCTTAATCTCGTAAACTTGTTGTTTATTA 188690 47 100.0 30 ............................................... TATTGCTGTGGTGTATTAACACCTGCTGAA 188767 47 100.0 30 ............................................... ATGTTACCATTAGAAGCAAAAGACAGAGGA 188844 47 100.0 30 ............................................... CGATTGATTTAAGTATCATACCTAACGCCA 188921 47 100.0 30 ............................................... TTTCCTGTTGGTTTTGATGTTACTCAAACC 188998 47 100.0 30 ............................................... GGTTATGGAATGCGGCAATGACAGCAAATC 189075 47 100.0 30 ............................................... GGAATCATTACTGAATGATAATGATGTAGG 189152 47 100.0 30 ............................................... AAGCTCCTTGATTGGTATTCATTATTTAAA 189229 47 100.0 30 ............................................... TTATCCCAAAGAATTTCCGCTTCGGTTTGT 189306 47 100.0 30 ............................................... ACAATTTTCCAAATGCAGAATACATCGGTT 189383 47 100.0 30 ............................................... TAAACAAACTCTAGAATCTTTGAAATTATC 189460 47 100.0 30 ............................................... ACTCTACATCGAGATACTGACCTGCTGTGT 189537 47 100.0 30 ............................................... AAACGGTTTTATCCTCTGTAACCATATAGC 189614 47 100.0 30 ............................................... ACGCAGTTAACTCATCTATTTTTTTTTCAA 189691 47 100.0 30 ............................................... GCTCGGCAAAAATTATCAGCTTGCACTGGA 189768 47 100.0 30 ............................................... CTACTTTCGCTTTTTGTACAAGATTATAAA 189845 47 100.0 30 ............................................... TGGCAACTGGGATTTAACCATACTAAGAAA 189922 47 100.0 30 ............................................... TTTCGGCTTTTGGAACACCTAAACGACCTC 189999 47 100.0 30 ............................................... TTGAAATACGGATTTAAAGAGACTAATACA 190076 47 100.0 30 ............................................... TCGTTGATAAATCTTGATGTTATAGGCATA 190153 47 100.0 30 ............................................... TTCAAAAAGAAATATCCCTTTTTAACCGAT 190230 47 100.0 30 ............................................... GTCCTTTAAGTCTTTATAGTCTATTGGAAT 190307 47 100.0 30 ............................................... TCCCCGTTATAAAGGTTTTTAACGAAAGAT 190384 47 100.0 30 ............................................... TCATTATGATTTTTTCATACTTGATCTTGT 190461 47 100.0 30 ............................................... TGCCAAGCTTTTTCAATATTGTCAATATTA 190538 47 100.0 30 ............................................... TGCACATTAGCCCTAATGGCGAAGTAATCA 190615 47 100.0 30 ............................................... TAATAGAGTGAATTGGCGAACCATAACCAT 190692 47 100.0 30 ............................................... TCTTTCGACTACAGGCAGGAAAGAACAACT 190769 47 100.0 30 ............................................... AAAGCCGAAGTAAAACCAATTAACCAAAAT 190846 47 100.0 30 ............................................... TTCAGAAGCTGATGAAAGTGGTAAAGAAGT 190923 47 100.0 30 ............................................... GTTAATGGAATCTTCCATTTTGAAGGTTGT 191000 47 100.0 30 ............................................... GATTGGGAAATGTTTGCGTTTTCTCCAGCT 191077 47 100.0 30 ............................................... TTTTCCATGATTAGAACTTAAACGTATCTT 191154 47 100.0 30 ............................................... TGTCACCTTCAAATATTGTGAAGGTAAAAG 191231 47 100.0 30 ............................................... GAGTCCATTGGGTTGAGATCTACTTCTTTT 191308 47 100.0 30 ............................................... TTGAAAATTGCTGAAGAGTATTACATAGAA 191385 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 47 47 99.6 30 GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATAATACAAC # Left flank : GCAATAAAAGTCAGATAATAGAGCTTTGCGACTGGATGCAAACCCGTGGCTATTGTAGAAGCCCTTTTGATGGTGGTACAACCGTTACGGTGAATACTTCATTAACATATAATGCAAGTTATGAGGATATCATGATTTATCGAGTCTAATAATTTTACATTGTAGATAAATTATATGTTAACTAATTGATTAATTGCTAAATATTTCGTAAATTGACTTATAATTTATAAAATATGGCAAAATCGAAAATTGTATTTAAAAGTAATGGCAAGAAAGTTTCACAAAATACTTTCTTACAAAATTTGGAAAAAGCAGTAGTTAGCAAAGCTAATGAAAAGTTAGGAAATAAAGGTGATGAACAATCAGACGACAAGCCCTAATTCAATCTAACTATAGATAAAAAAATACGCTCAATCTGAGCGTATTTTTTTATGTTTCTAACATTGTATTTTTTTTGACGTTTTAATTAAAATTTCTTGACCTTTTAATTTGCCGTTTAT # Right flank : CCTCAAAATTTAACCCATTGTTTTTCAATGGGTTTTGTTTGTTTTTGGGATTCTAAATTTAGAATAATTCGAGCTGTTGGAAGGTTGGTGGTGGCTCTTCTCGATTTCTGGCAAAAAAGATCTCTATGTCTCCGAATTGTTTATCAGTGATGCACATGATGGCTACTTTTCCTGCTTTGGGAAGCATAAATTTCACTCTTTTAATGTGTACTTCGGCGTTTTCTCGACTCGGGCAATGGCGGACGTACATCGAAAATTGGAACAATGTAAAGCCATCATCAATGAGGCCTTTGCGAAATTTGTTGGCATCCCGCATATTGGTTTTGGTCTCGGTTGGCAAATCGTATAGTACTAAAACCCACATAATTCGGTAAGCGTTAAATCTTTCAGCATTCATTCGTTTTTTTGAAATGGTTGTTTCTTGACTTTCTTTTGTTTTTATCTGTGAGTTGCAGCCCGACCTGAGTGGAGCTCTTTTATATTTTTTTCTCAGAAAAAAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATAATACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.34%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATAACACAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.50,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //