Array 1 93228-93622 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGYN010000013.1 Klebsiella michiganensis strain 4928STDY7071682, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 93228 29 100.0 32 ............................. GCTATCAGCCTCGTTTTGTAATCCATGTTGCA 93289 29 100.0 32 ............................. AATCTTCTAAACGTGCTGGCTACGAACGTTTT 93350 29 100.0 32 ............................. TCGCGACAGATTGGGGCGACCTGGTATTTTGC 93411 29 100.0 32 ............................. TCTTCAGAGCGCACCCTTGCTGTTCAGGCTGC 93472 29 96.6 32 ............T................ CAATGGTAACAAGTGATCCGAGCGCAATCATC 93533 29 96.6 32 .............T............... GACTCACGAAACGCTTGGTTGATGTCTGAATG 93594 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 7 29 99.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGCATGCGCTGGTTAAAGCGAAAGTAGCCGTGACCGTTTTCCCGCCTTCCCCTGACGTTGCCTCTTTTAGCGGAATAACGGCGTTATTTCCCTTTATTCAACAGCCAACCCCATTACAGCAAAAAGCGCTTGAGCTGGATATTGATAAACAAGGTCCGCAATTATTTATTCTTGAAGATGTGACTGGTGCTGGAAAAACAGAGGCTGCGCTTATTTTGACACATCGCCTGATGGCTACGGGAAAGGCGCAGGGGCTCTATTTTGGTCTGCCGACGATGGCGACGGCGAATGCCATGTTCGATCGTATGTCGGAGAGCTGGCTGGCGTTGTATCAACCCAGTTCACGGCCAAGCCTGGTGCTGGCGCATAGCGCACGTGGATTAATGGATCGCTTCAATCAGTCTTTGTGGTCGGGAGATTTATCGGGTTCAGAAGAACCCGATGAGCTCCAGCCATCCAGCCAGGGATGCGCCGCCTGGTTTGCCGACAGTAATAAAAAA # Right flank : GCCCGGAGGAAACGTGGCAACAGTTCAATACACGTGTTCCCCGCGCCGCCATCCTTATTATCCTGTACTTTATTTTTTCCAGCATTCTTTAGTGTGGCAAAGTCCGCTTCCAGGTAATACTTGCCAAATTTTGGGCTCATGGGAACAGTGCGCCGTTTTTAACATAGCGCTTATACCGATGTTTTACCGATGCTGGGTTCCGAGCCCAAATCCAACCCGTCCTGCCAGACGCGCTGCCAGATATAAACCTGGCTGTCGGCGATGGATCGCGTGCTGGCAGCCAGTAGCAACAATGGTATTAAAAAATGAAAACGCATCATGGCGACAGGCCTTGTTGCCGGATTTTATCGTTAGTCTATTTTGAGGCGGGTCTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATACGCCCCGGCAGCGCTTTATCAATATACTGTAGGTTATCCAGCTGTACGTCATGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 358158-356749 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGYN010000002.1 Klebsiella michiganensis strain 4928STDY7071682, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 358157 28 100.0 32 ............................ TATAACTCGGCCACAGGTCGGCTTATCCTGAA 358097 28 100.0 32 ............................ ATCAGGCAAAACATTTCCTGCATGTTCGCGAT 358037 28 100.0 32 ............................ TGATCCGCAGATTGTACCGGCGTCGACCACAG 357977 28 100.0 32 ............................ AGACCGATTTTATCAGCCAGGGGGATGATCAC 357917 28 100.0 32 ............................ ATGTACTGTGCCAGCAGCTGAATGCGGAAGGG 357857 28 100.0 32 ............................ GCAGTGTCGCGTTCCAGAAACAGCCTGATTTT 357797 28 100.0 32 ............................ AATATAAATTGCCTGAATTTCTTGCGCGTACT 357737 28 96.4 32 ......................C..... ATTTGCCGAAAATGCTGCCGCAGTTGTATTTG 357677 28 100.0 32 ............................ AGTATCCTAAAGAACCGTTGCGGCGGCGGTTG 357617 28 100.0 33 ............................ TCTACGTACAGCAGAGTAAAGCATGAAGTCAGA 357556 28 100.0 32 ............................ TTCCTGGTTTCACCATCTACAGCTTTCACCTG 357496 28 100.0 32 ............................ TTCAGGGATATTCGCGATGTCCGCCTGAGCAG 357436 28 100.0 32 ............................ TTACAGGTGACATCGCACACCCCTGATACCTC 357376 28 100.0 32 ............................ TGTGGCAGCCGAACAAAAACGGCGACGGGATT 357316 28 100.0 32 ............................ AGTGCAGCAAACCAGAGAAGGGCGCGCCGGCT 357256 28 100.0 32 ............................ AGAAGAAAAGGCAGACCCGATCAACGAAGAGA 357196 28 100.0 32 ............................ GTATTCGGTCCAGTGCCTGATGGCGCGGATGC 357136 28 100.0 32 ............................ CGCCGCGAAACTGGGCCACGCCTTCAGCTGCT 357076 28 100.0 32 ............................ ACCAACAAACTGCAGGCAGAGCAGAAAGCCGC 357016 28 96.4 32 ............G............... AAACTTCGCGCGGATTTCAGCGATTTTGTTTA 356956 28 96.4 32 ............G............... CGCTACTCCGCAAAAATGAAATTCGTGTGCTG 356896 28 100.0 32 ............................ ATGTTGCGGAGAATCCACAGCCTGTTCTCAGT 356836 28 100.0 32 ............................ TGCACGAAATCAACGTTGCCCGCTCGGTTGCC 356776 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 24 28 99.6 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGGTTATCCATCAGGTGGTGGATAAATTTATCGTCGAGCTGCAGGTTCAGCTGGATCAGAAAGGCGTCTCTTTGGAAGTCAGCCAGGAAGCCCGCGATTGGCTGGCCGAGAAAGGCTACGACCGGGCCATGGGCGCGCGTCCAATGGCGCGGGTGATTCAGGACAACCTGAAAAAACCGCTGGCCAATGAGCTGCTGTTTGGCTCACTGGTTGACGGCGGACAGGTGACCGTTGAACTGGATAAAGAGAAAAATGCGCTGACCTACGACTTCCAGAGTGCGCAGAAGCACAAACCGGAAGCTGCGCATTAAGTTTCGGTACTCAGTGACAAAACCGGCCTCAGGGCCGGTTTTTTTATGCCTATGTCCTGGACCCTTTTTTATTCCACTTTTTAACTTGTTGATTTTAATAAAGAGAAAATATAGCGTAAAATTATGGTGGCAGAGAGGATGTGTTGATTAATTTCAATGATAACAATATGGTAGGGTGTTGTTCGTTCA # Right flank : AGAGCTTGCCCACACTGCTGTGCAAGCCAAACGAGTCTAAAGAAATTGCCAAAGTAATAGGTTATTTTGCAAGTTGCGATGAATGTCACCGTATTGCATCTAATATACTGTTTTTATAAACAGCTATCGACTTTGAGCCACAGGATGTGACTATGCCCGCGAAGTATATTGCCCCCTCGGATTTAAAAACGATACTCCATTCAAAACGCGCCAACATTTACTATCTGGAAAAGTGTCGTGTGCAGGTTAATGGGGGGAGAGTGGAGTATGTTACCAGTGAGGGGCATGAGTAATTCTACTGGAATATCCCAATAGCAAATACAACGGCCATTATGCTAGGAATGGGAACCTCTGTTAGCCAGGCAGCGATGCGTGAGTTCGCCCGCGCGGGTGTGATGGTAGGTTTTTGTGGTACGGATGGCACACCTTTATATGCCGCCAATGAAGTCGATATCGACGTTTCCTGGCTATCGCCACAAAGTGAATATCGACCAACGGAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //