Array 1 26802-28091 **** Predicted by CRISPRDetect 2.4 *** >NZ_VBSF01000037.1 Apilactobacillus kunkeei strain UASWS1870-NN20 Contig38, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 26802 36 100.0 30 .................................... GTTCGACTTCGTTTCTGGTTCTCACTCAGA 26868 36 100.0 30 .................................... TAGGAATTACTATCAACGATAGTGCTGGTA 26934 36 100.0 30 .................................... AAGTTCATTGAACATTTCTTTGGTAACTTG 27000 36 100.0 30 .................................... TGTCTAATTTGTTAATCTGAAAGATCTACC 27066 36 100.0 30 .................................... TAAATAAGATCCAAACCAAACAATAAACCA 27132 36 100.0 30 .................................... AAAAGCGAGCAATGAAAGATATCTTATCAA 27198 36 100.0 30 .................................... TAATGCTAAGTTCGCTAATCAAAAGGACTT 27264 36 100.0 30 .................................... GCTTTGATGATGACGACGACTTTCTAAGAT 27330 36 100.0 30 .................................... TATAATTATGTCATGCTATCATGCTAAATC 27396 36 100.0 30 .................................... GCACAAAAGAACCAAAAGTGTGATGATTAA 27462 36 100.0 30 .................................... TGTCTAATTTGTTAATCTGAAAGATCTACC 27528 36 100.0 30 .................................... TAAATAAGATCCAAACCAAACAATAAACCA 27594 36 100.0 30 .................................... AAAAGCGAGCAATGAAAGATATCTTATCAA 27660 36 100.0 30 .................................... TGTTATACGTTCCAGAAGGGACTACAACTC 27726 36 100.0 30 .................................... AGATTAAAAACATAGCCGTTTTGGTGGTAA 27792 36 100.0 30 .................................... TCTAGTTATCGTCATGCACTATTCAATTTT 27858 36 100.0 30 .................................... AGTCGCCAACTAGAATTGTTTCTTTTGATG 27924 36 100.0 30 .................................... AATGATTTAGACCAACAACAAAAAAACACT 27990 36 100.0 30 .................................... ATTTGTGGATTGTATGTAGGTAAATGTTTA 28056 36 94.4 0 ................................A..A | ========== ====== ====== ====== ==================================== ============================== ================== 20 36 99.7 30 GTTTTAGAAGTATGTCATATCAATGAGGTTTAGAAC # Left flank : ACGGTCTATCTACTAAACAAATTAGTTCTATTATAAAGAAGGTAGTTGGTTGTTTTGATAATGACGATATCGACTATATGCAAAGAAATATTTCATCGTTGAATAATTTTATTCAAGAAAAATTGTTTTTTTGGGATATACCATTATTAATTACTCAAGATATTGATATAGAAAAAACTATAAAAAAGCTGAATATTCATTTAAATCCAGACATTGAAGGAAATCCTTATGATATAATAGAATTATTGATAAGGTTAAAGATGGAAACTCAAGATAAGTCATTGATTGTTGTAAATAATTTAGCTAATTATTTGAACAGCGATCAGCTACAAAGCATTGAAAAATTATGTAAGGAGTTTGAAGTTCCATTATTAGATATTGAATTTGGTAAAAACAATGATATTAATAATACTGATTTTTCATTTTGTCAGTATTACTTTATAGATGATAACTTTGTTGACTGGCATTCTTAAAAATTAGATTTTGATTATAAAATATCG # Right flank : AGAGCTTGCTATATAAGCTCTTTTTTAGAAATAGATTTAAAATAAGATATATTCTATCTTATTAATTATGATTACGTTTCAGTTATCTATGATTGTAAAATGAAAATTTATAATAAAGATGTAGTGAATATTCAGATTATATGATTTTAACACTCACAATATAATCTTAATAAAAAATTAATAAACTTTACTTTTTCTTAATATTTTCGTATAATACAGAAGTAGGTAGTCATTCCAGATGATTTATCTTAATGTTTATTATTTACAACTCTCTATAAATCTAATTGTGCACCTCTCTATGTAATCACGCACAAATTAGGTTGGCCTGTCCGCTTGTTGGGCAGGCTTTTTATTTACTCTATTTTATTTATGAATAAAGATATACTTAATTTATTATAGATTTGGAAGATGCTATTAGAATTAAAGGAATTATATTAGAAATAATCGAATCAATATTTTGGGGTATGTCCAGAACTGTTGCAGAATATCTTTTTGAACAT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGTATGTCATATCAATGAGGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.60,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //