Array 1 8122-8945 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTXA01000046.1 Bacillus cereus strain AFS008423 AFS008423_110_B9_Contig46_140523, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 8122 32 96.9 33 .........T...................... CTATATATAGCCAGCGTCCTCTTTTTTATATAA 8187 32 96.9 35 .........T...................... TTTTGTTGCGCCTAAGTCTTTCCAAGGTCCTTTTA 8254 32 93.8 33 .........T.A.................... CTTAGAACCTATAAAAGAACAACCTTCTACCAA 8319 32 96.9 34 .............A.................. TCAGAACCTTTTTTAATAATGTAAATAAAGATCA 8385 32 96.9 34 .............A.................. ATTTGGTAGCGCATTGTTTATGGATGCACGATTT 8451 32 90.6 36 .......T.T.....A................ ACAATTCCTCGTGGTATGAACCCTGAAGATGTTAAA 8519 32 96.9 33 ...................T............ ATGCCAATCGGTGTCCAAGCCGACTTCATTAAC 8584 32 90.6 34 A........T.A.................... CCCTGCTGATGCAACATCGCTACCTGCATTTTGT 8650 32 96.9 34 ....................A........... GATGATACAGAAAAAATAGTACCAACAATCCGAC 8716 32 100.0 34 ................................ TCCAAGGGGGAACTGGGAGAAAGTAACTTAATGG 8782 32 100.0 34 ................................ GAATACGATTATCAAGATGAAAGCACAAAAAAAG 8848 32 96.9 34 ...................T............ TACCTCGGGTTTATATTTATCTGGAACGCTCATA 8914 32 93.8 0 .........T....G................. | ========== ====== ====== ====== ================================ ==================================== ================== 13 32 95.9 34 GTCGCACCTCATATAGGTGCGTGGATTGAAAT # Left flank : TATCTAGTTATATATTAAAAGTTGAACACAAATAAAGAGAAGAATAATTAAAGTATTTTTGAGTTAGCAAAATAAAGGAATTTTTAGTATTCAATATTCTTAAGAATGTTATATCATAAAAAAAGATCAAACGATGATATAAAGAATAAACTTGATAGGTAGATAGAGAGACAATATATAGTGAATTTTATTGTAAATTACGACTCAATATATTAAGGGTATTATGAAGCTATACATTTTTGTTAATTAGTTAGTTAATAACTATGAAAATAAGGTCGAATATATTGATATAAAAGAATGAGTTGATTTAGAAAACCTTTAATTTTTTAGGTGCGAATGTATAGCAAACATAAAATTCCTAATACATTCGCACCTAGAATTCTCATGCTTTATGATGGGAATTTATGATTTTTTATACAAATTAGTTTATTAAATAAAAACATTTTTATATTTTTGGATAAAACTAACGTATTTGTGGTTGATTTCGAACACAAATCGGT # Right flank : TAGTTTAGTAGATACTCAACTGGAAGTATCTACATCTGCAGTATCTAACAAACATGTAAAAAATATAAAATGGAGGGAGATTGAATGACCTACATTGCTCATATACGCGAGAGTGACAGTCAAGTACAAACAGTCGAAGAGCATTTATTAGGAGTAAAAGAACTAGCTGAAACCTATGGAGAAAAAATTGGTATAAAACATTTAGCTGGTTTAGCAGGTATGCTCCATGATATGGGTAAATACACCAATGAGTTTAAAGAATATATATTGGAAGCAGTAAATAATCCTAATTCTCCACCTAAAAGGGGGAGTGTTGACCATTCAACTGCAGGGGGGAAATTGTTATATCAATTATTCCATACAGAAAATATGATTCCTTACAAAGGGATAATATCTGAGATAGTGGGAAATGCCATTATATCTCACCACGGATACCTTCAAGATTTTTTAAATCCAGATTTAGAATCGCCCTATTTAAATAGAGTACGAGATAAGCAATT # Questionable array : NO Score: 8.32 # Score Detail : 1:0, 2:3, 3:3, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.26, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTCATATAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACCTCATATAGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.20,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 17276-18033 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTXA01000046.1 Bacillus cereus strain AFS008423 AFS008423_110_B9_Contig46_140523, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 17276 32 100.0 33 ................................ GAAAGAAGATGTTAATTCTGTAACCGCTTCTTG 17341 32 100.0 34 ................................ AAAAGATGCAACAACAATTGAATATGATTTGAAA 17407 32 100.0 35 ................................ TACAGTTACGTTGCAAAATGAAGAAGGAAAGGCAG 17474 32 100.0 34 ................................ TCCCTCTCGATCCATAGGCTTATCAGGAGTCATT 17540 32 100.0 35 ................................ TCGATACACAAATCTAAAAAGCTAACAATCGGGTC 17607 32 100.0 34 ................................ AAAAATGTCTTTTATCGTCAATATTCTGCTCCTC 17673 32 100.0 34 ................................ TTTAGTAGGTTTGTAAGGCATTTCCAAGAATAAC 17739 32 100.0 34 ................................ TTTTGGCGTTGTTATCAACGTTTGGTACATAACT 17805 32 100.0 33 ................................ TATAAAAAAGAAGTATGTTGATTTAGTTAAGCA 17870 32 90.6 34 ......T..C...A.................. ATTGGACGTAAGCGTGCTGCCACGAAAAATGATA 17936 32 96.9 33 .......................A........ CCATTAACGAAAATATAAAAAGCATACGTGCCG 18001 32 71.9 0 ....T.T..C.......A.T....T.A.G.C. | A [18024] ========== ====== ====== ====== ================================ =================================== ================== 12 32 96.6 34 GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Left flank : AGATGAATATCCACCATTTTTATGGAAGTAGGTGTAACAGTTGCTAGTATTAATAACATATGATGTAAGTACAGCTAACAGTATTGGACAAAAAAGACTGCGAAAAGTTTCGAAAACATGTCAAAATTATGGCCAACGAGTCCAAAATTCAGTGTTTGAATGTGTTGTGGACGCAGCTCAATTTGCTACTTTAAAAATGGAATTAATTAAAATTATTGATGAGGATGAGGATAGTCTCAGATTTTATCAGTTAGGTAACAACTATAAAAAAAAGGTTGAACATATCGGTATAAAGGAATCCGTTGATTTAGAAAGTCCTTTGATTTTTTAGGTGCGAATGTATAGCACACATGAAATTCCTCGTACATTCGCACCTGAATTTTCATAATTTATGAGTGAATTTTAATATTTTTCATACAGGTTCTCTTATTAAATAAAGAAATATGTATATTTTTGAACAGAATTAATGTATTTTTGTATGATTTTAAACAAAAATCGCT # Right flank : TGGTAAGATGCTTGATAGTAATTTAGTGTCTCTGCTGGAATAAGAGGACCTGTTTCAATACATACGGAAACAAGTGTTGATCCGATTGATATTACTAGTATGCAGATTACGAAAAGTGTAAATTCTGAGCTGGGGAAGGATAAAGGATCAGATACAATGGGGATGAAGCATCGTGTTGATTTTGGAGTCTATGTTTTTTATGGAAGTATCAACACACAGTTAGCAGAAATGACAGGTTTTACTAACGAAGATACGGAGAAAATTAAAAATGCACTGGTTACATTGTTTGAAAATGATGTATCAGCAGCACGCCCTGAAGGAAGTATAGAAGTACATAAAGCTTGTTGGTGGAAGCATAATTCAAAACTTGGCCAGTACCATTCCGCAAAAGTACACCGTTTACTGGATATTAAGCGGAACATTGACGAACCAAAATAATTGATGACTATAACATTTTGGTAAAAGAATTAGATAGTTTAAAAGTGACGATTATTGATGGA # Questionable array : NO Score: 9.09 # Score Detail : 1:0, 2:3, 3:3, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //