Array 1 2140831-2143112 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP028222.1 Lactiplantibacillus plantarum strain SRCM101105 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2140831 36 100.0 30 .................................... AAAATGGATTTCTGAGCATTACTGTCCGAC 2140897 36 100.0 30 .................................... GACTATACCAATGAGGTCGAAGCATGGTTA 2140963 36 100.0 30 .................................... CACAAGGCCACCGAGGAAGCCGGCGAGCTA 2141029 36 100.0 30 .................................... GTTTTTAGCAGATTTAATGAATTCGTCATC 2141095 36 100.0 30 .................................... TAGGTTTACTCATGGTAAATCCTCCTATGT 2141161 36 100.0 30 .................................... AAAATAAATTTAAGGTTGCGCAACACAATG 2141227 36 97.2 30 ...............................G.... AACTCATCATAAATGACGTCTTTTACCGAG 2141293 36 100.0 30 .................................... TTAGGTTGAGCTGGATCGGGATCAGGATCG 2141359 36 100.0 30 .................................... TCTGTTGTTTAATTTGTTTTAGATTGTTAC 2141425 36 100.0 30 .................................... ACTAAAGCCGGGGTATACAGCCCCGAAGAA 2141491 36 100.0 30 .................................... AAAATAGTTCGACGAAAAAGCCGAAAGAGA 2141557 36 100.0 30 .................................... GCGGCCACGACCGCCATGGGTGTCAGCGCC 2141623 36 100.0 30 .................................... TCGGATAACTTAGCGGCGGCGTATCCCTGC 2141689 36 100.0 30 .................................... TACCGGGTGTTAAATCTGAATTAGAAGCGC 2141755 36 100.0 30 .................................... TCATCAACATTTTCATCAACGCGACTAGTT 2141821 36 100.0 30 .................................... ATAGTGACAGCATCTGTTTTCGGACCAATC 2141887 36 100.0 30 .................................... TGTCCATACGAGCAGCGTTGGCACTTATTC 2141953 36 100.0 30 .................................... GTATTATTATCAACGTCCCGCATTGCGTTA 2142019 36 100.0 30 .................................... AGGATATATGAAATTAGTACATGTACTAGT 2142085 36 100.0 30 .................................... ACGTCTTTCAGCCCAGTAAACTGCTCAAGT 2142151 36 100.0 30 .................................... TTGAATACCATTCCTTGTTTATACTCCATC 2142217 36 100.0 30 .................................... AGTTCATAATCATATGATCTAAGTGACGGT 2142283 36 100.0 30 .................................... GGCCGGGTTAATCTTAATGTTTTATGTTCT 2142349 36 100.0 30 .................................... CAATCAGAAAGAAGATGACGACTATAATGC 2142415 36 100.0 30 .................................... GACTTATACCAGCAGTACCGAAGACGGTTA 2142481 36 100.0 30 .................................... AACTGGGAGCGGTCAACACCCCAGGCTGTG 2142547 36 97.2 30 .............T...................... ACGCAAAGCCAGCCCTAGTCATGAGGTCAT 2142613 36 100.0 30 .................................... GTTGCAACTTTATCCTTGTCACTTTCAACA 2142679 36 100.0 30 .................................... CAATACCATAGTAGTCAATTATTACACGTC 2142745 36 100.0 30 .................................... GCCAAACAACATTGCAGAGAGCTAGTGCTT 2142811 36 100.0 30 .................................... GTGACGTGCTCCCATGTGACCCGAATTGAC 2142877 36 100.0 30 .................................... CGACTCTAATGGATATTTTCAATCATAGCA 2142943 36 97.2 30 ........................T........... GATGGTGCTGTTGCACGTGATCCCGCGCTT 2143009 36 94.4 30 .......................G...........T AGCATAATGTATTATGTAACATATTATGTT 2143075 36 75.0 0 ..........ACG.C..C.........T..C.C..T | AA [2143096] ========== ====== ====== ====== ==================================== ============================== ================== 35 36 98.9 30 GTCTTGAATAGTAGTCATATCAAACAGGTTTAGAAC # Left flank : CAGTCGATTTGAACCGTCTTTTTCTAAAGAAAGTGCAGACCCAAATTATCAAGTTAATGGCTGATGATCGGCAAGTAGCGGTCTTAGATGAAAATCGTAAAGTAGTTTCGCAAGTAATGGAAGCCAGCTTCTTACTAGACTTACCGTTAGATGTTGACGAATCGCCTAGCCTAGAACAAATATTGAAGTTTACCGGTATTCACTTTCCGACGGAGCTTATGAATGACCCAAGGGCAATACTGGAGGCACTCGTTCAGACGCATGTTGAGCTGGGCTTGAAACAAAAACTGGTGTTGACTAATATCAGCCATTACTTAGATCAAAAACAATGGGCGAGCTTTGAGCAATTAGTGCATGATTTGGGCGCAACTGTCATTGTTATCGAATACTCAGAAATAAATCGAATGGAAAAGTTCAAAAATAGTTGTTATTATTATGTTGACGAGGATTTAGTAGACTGGCGTGATATGAATTAATGAGTAAATGATGTTAAAATGCTG # Right flank : TACTAAAAAAGGCTCACCAACTAAAACAGGTTGGTGAGCCTTTTCGATTTATTGACTAATTACTAATCAATCACGCCATCTTTTCCCATCCATCGGAACCGAATAAACTTCCCGACCTCGGTCACAATCAAGACGACGATCCCACAGATAATCGGGATGCCCCAACCATACCAGAAGTTGATGCTAGTCGTATGGAAGACGGATTGCATGAATGGTAGGTAAATGATTCCCAGTTGTAAGAGAATCAGAATACCAATGATGTAGAACGCCATCTTATTTTGGAAGAAGTACTTGGAAATGACGGGGTGGTCATTCCGCAAGTTGAAGAGGTAGAAAATCTTACCAAAGATGATGATGTTCAGTGACATGGTACTACCGACGACATTTGGTAATCCAAGTGCGGTCAAGTAGTTGTAGGCGAAGATCCCCAAGCCAGAAATTAGGAAGGAGACATAGCCGATTTCAAAGTAATCTAATTTTGACAACAACCCAGACTTAAC # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTGAATAGTAGTCATATCAAACAGGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //