Array 1 15729-15521 **** Predicted by CRISPRDetect 2.4 *** >NZ_LOMY01000067.1 Photorhabdus australis subsp. thailandensis strain PB68.1 Ppb6_contig000067, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 15728 28 100.0 32 ............................ AGTGCCGCCGCTGGAAAATCTGCAACTCACGC 15668 28 100.0 32 ............................ ATTGTTTGGCCACCCGTCAGGAAAAAGGGCAA 15608 28 100.0 32 ............................ TTTCGTATTCGTGATTCAATTTCTTTAGTTTT 15548 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 4 28 100.0 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TATTTGGGATACTCTCTTGGTGAAAAATGGCAGGGAAAAGGGCTGATGTATGAGGCTTTACAGCCAGCTATTCGTTATATGCAACGTCAGCAGGGAATGCATCGAATTATGGCTAATTACATGCCAGATAATCATCGTAGTGGTAAGTTGCTAGAACGATTGGGTTTTGAGCGAGAAGGTTATGCCAGGAAATACCTGATGATCAATGGAGTCTGGCAGGATCATGTATTAACGGCATTGACGGATGAAAAATGGAGTGGAAAAAGTTGATTATTAAGTTGTATTGTCACCAGATAAAATAAAGAGGATTAGTAATGATGAATTAAATCACTGTTGGAAATCTGCCAGGTTCCCCGCACCTTATTTTTGACCCTTTTTTAAGGAGCTATTTTAATTTATTGATTTTCAATGGAATATTATTTCTCTTGTAAAAAAGGGTTTTTTCGTTGTTTTATTAAAATATACTTTAATCGTCAGTAGGTTAAGGTTAATATGCAACA # Right flank : TTAGAAATTAGAAAATACATAGGAACTATCTGTACTGTATGGCAGATTTATCAACGGAGGCAAGCATGAGTTATACCCGTTACGAAACTGATGTGCTCGCTTGGGCGAATGAACAAGCGGCATTATTGCGCGCAGGTAAATTCTCTGAGATCGATGTAGCCAATATTGCTGAGGAGATTGAGGACGTGGGCAAGAGTGAAAAACGTGAACTGGCAAGTCGTATGGCGGTTTTGCTGGCCCATCTTCTGAAATGGCAATTCCAGCCTGGGCGTCGTGGTTCAAGTTGGCAACGAACTATCAAGGAACAGAGAAAAGCACTAGTATTGCATATAAAAGAGACACCCAGTCTGAAAAACACAATTGCTGATGAGGACTGGTTTGCTAAAGTTTGGGCTGATGCAGTTTCTTCCGCTATCGACGAAACTGGGTTGGATATGTTCCCAGATGAATGTATCTGGAATATAAATCAGATCTTTTCACAAGAGTTCTATCCTGACTAA # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 56059-55911 **** Predicted by CRISPRDetect 2.4 *** >NZ_LOMY01000180.1 Photorhabdus australis subsp. thailandensis strain PB68.1 Ppb6_contig000181, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 56058 28 100.0 32 ............................ TGTTCCTGATCATCTTTACCTTCATCCCTATC 55998 28 100.0 32 ............................ TGATTGCACCGAATGAGAATCCCGAATTTCAC 55938 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 3 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TGCTTGGTTTGATTTTTTTACTATTAATATGTGGGCGTATTCCTACACAAGAGAATAAGCAACCTGAAATTGGTGATCCGGAATATTGGGAATATGTTCCCAAACCAGATTCTGGATATTTAGTTCCTCTAATGACAGGTTATCAGGCAATATTGCCGTTATACTCTGCTGAGCAAGTGGAGAAAACTCGAGATCTCAATATCCCATATTGTTTTGTAGAAGCAATCTATGGGGTAGGTGAATGGAAAAGCCCGCACCGTATTAATGATATTCTATTGTTTGTCAAACAAGGGCTAATAGAAGACAACTCAACGTTAGACGTTTTCAGCTCTTATGGATTAAGTTCATCCGCTACCGTTCCTTTGGTTTTGACCCTTTTTTAGCGACTAATTATAACTGATTGATTTTATTAAGGGATTGGCCTCTGCTAATAAAAAGGGTTTTTTCCGCTTTTTATAACTATGTTTTTAATAATCAGGAGGTTATAATTGTTTCCTAAC # Right flank : GATCACCAGCATTGAGCGCTATTTGACACTCCCGACACCCCAGAAGCTACCGACTGATTTTACCGTCCCGAAACTGGCGTTTCCAGCCAGTCATTACGGTGATGAACAAATTGGATTTGGATTTTGATTGAAGACAGAAAATTGATTACTCAGGTAGCATGTCCGTTATCACGATAACCTGTCCTTCATCTGTTATGGTCACTTTCGGTAAGTAGGCTATAATTTTGCCCGTTTTTATATCTACTTTCGCTGTACGATAATCTTCTTCTATCTTTTCGAATATACTTCTACCTTTGAATACAGTGTGTACGACAGCGTAAGGTTGTTGTTGCTGGTTGAGGGCTAATCGGTAGGTTGTTTCAATATGTTGATAACTTGAAACATCAAACATATTGCGTTTAATGGCTTTTTCTAACGGTTTGTAGGCATTATTTGTGCGGCTAAAGTTTGAAATAAAGTTATCCAAATTGATTGAGTCATAAGGTGTACTTAAATATTTT # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.10,-8.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 58703-58435 **** Predicted by CRISPRDetect 2.4 *** >NZ_LOMY01000180.1 Photorhabdus australis subsp. thailandensis strain PB68.1 Ppb6_contig000181, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 58702 28 100.0 32 ............................ AGCCGCTCCTGAGAGAACTTTGCTTGTATTCT 58642 28 100.0 32 ............................ ACGTGGTAATGACCAGGATAAAACCCCATAAA 58582 28 100.0 32 ............................ CGTTAACCCTGTGGCTCCTAGTGCCTTACAGT 58522 28 96.4 32 ........................G... AGTTCGATGCAAGTATACGCCGGTTTGATGAG 58462 28 85.7 0 ...........T........T...G..G | ========== ====== ====== ====== ============================ ================================ ================== 5 28 96.4 32 GTTCACTGCCGCACAGGCAGCTTAAAAA # Left flank : AATTAATTTATTGTAAAAGTAAAATTTTATTACTATTTGGAAAATTGATTTTAAATATAAGTGAATGTAACTATGAGGTATTATTCATAGATGTAAACTATTTAATTTCATTCAGTATTGAGTAGAGAAATATAGAATATCTCTTAAATTGTAATCGTTAATTGATGGAACGATGTAAATAACTGGGGCCTAAATTAATAGCCTCTGGACGACTTAATATTTTCTTGTGTTCTGCCATTTATTTCCAATACTGGCGTTATGATGTTGGCAGAGTGTATTTGCATGTTGCTGTTTTTTGGGTCGGTACGAGCCTTATCAAATTGGGGAAATGTAACCCAAAGGATGGTGTTTCTTTGCACCTTAGTTTTGACCCTTTTTTAGCGGCTAATTATAACTGATTGATTTTATTAATAGATTGGTCGATGCTAATAAAAAGGGTTTTTTTCGCTTTTTATAACTATGTTTTTTAATAATCAGGAGGTTATAATTGCTTCCTAACT # Right flank : AAACTGTGCCGGCTGATATTATTTTGAGCCGAAGTTGGGGCGAAATACATAAACTCAGGGAAAAGCAAGAAGTGCTCTTTTTTTAAGATAAATTGAACATTTAAAGAAATAAACTATCTAATGAATATGCCATTGATGATGAGGTGTTTTATGAGCGTATTTGTTTATCGTGCATTGACAGAAACAAGTTTAATGCCATGACTTGATTAATACCCTATTTTTCATTACCACAGCAATAATTAGGAATGAAAATAGGGGAATTTTCAGGTATTTTGTTGTGAAATATACAGAGGAAAAATCTTGGTAAAGGGAATGAACAGAATAAACTAGAAACACTGGTTAGAGGTGATGAATGCAGGGCTGGAGTATTTATTGGTCAGTAGTGATGTGCCAAATTGTGTTTTCGTGTGCTAATTTAGCGAGTACCCAGATTATTATTTTGATAAGGTAGGTAAAAGCCTATGTATGAAAATAAATTGAGTCAATTTATTGTAGATTAT # Questionable array : NO Score: 5.88 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 49509-51338 **** Predicted by CRISPRDetect 2.4 *** >NZ_LOMY01000095.1 Photorhabdus australis subsp. thailandensis strain PB68.1 Ppb6_contig000096, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 49509 28 100.0 32 ............................ ACCGAAAAGTTCAATCATTGTTGAGATGAACT 49569 28 100.0 32 ............................ TGTTACAGATTACCTGTCAACTAGTAATTGAA 49629 28 100.0 32 ............................ ATAATTACCCCCTCGCTGTAATATTGCTACTT 49689 28 100.0 32 ............................ GTCTGTTTTGAAACCACTTGCTTGTTATTGAC 49749 28 100.0 32 ............................ AATAAAAGGGAGCGTGATCCTATCGAGACGAC 49809 28 96.4 32 ..................T......... TTATAGTTATTTAACGCCTTATCTCTCACATG 49869 28 100.0 32 ............................ TAAAGCGTCATATGTGGAATGCAGAAGTATTC 49929 28 100.0 32 ............................ AATTACTTTTAACTCAATTTTGTCTGGCTGGC 49989 28 100.0 32 ............................ AATAAAAGGGAGCGTGATCCTATCGAGACGAC 50049 28 96.4 32 ..................T......... TTATAGTTATTTAACGCCTTATCTCTCACATG 50109 28 100.0 32 ............................ TAAAGCGTCATATGTGGAATGCAGAAGTATTC 50169 28 100.0 32 ............................ AATTACTTTTAACTCAATTTTGTCTGGCTGGC 50229 28 100.0 32 ............................ AGGCGGTCAAAATCAACATCAGCATTGAAGTG 50289 28 100.0 32 ............................ GGGGGGCGCACGGTGGCAGGGGCAGCGCTAAA 50349 28 100.0 32 ............................ CACAATGCTCTTTCTAAAGCGGGCCTCTTCTA 50409 28 100.0 32 ............................ TGAGTAAAACCTTTGTTTGTCATAGCTAATTT 50469 28 100.0 32 ............................ TTGAAATGGCAACAGAAGAGGATGAAGCCGCG 50529 28 100.0 32 ............................ AGAGTGGTTGGCCACCGGAAATGGTGATATGC 50589 28 100.0 32 ............................ GACATTGACGATGATTTTTGTCGCCCCGCTCT 50649 28 100.0 32 ............................ ATTTTCAAGCCAGAATTTAACGATATTCCCCA 50709 28 100.0 32 ............................ TCACGTCACTGTCAAACCCGGCAACAAGCACG 50769 28 100.0 33 ............................ CAATCCACTGACGATACATGATGAAGGATTTTG 50830 28 100.0 33 ............................ CAATCCACTGACGATACATGATGAAGGATTTTG 50891 28 100.0 32 ............................ AATTACTTTTAACTCAATTTTGTCTGGCTGGC 50951 28 100.0 32 ............................ TTACCCGCTAAAGCTGCATCTACTAGCTCCGC 51011 28 100.0 32 ............................ TGATACCATTGCATTTACTTCATCTTGCGATT 51071 28 100.0 32 ............................ AATGTTTGTTATTTGCTATCATTTATCTTGCT 51131 28 100.0 32 ............................ TAAAGCGTCATATGTGGAATGCAGAAGTATTC 51191 28 100.0 32 ............................ AAGATGGTATTTTCGCTTATTGATTTTTTCTT 51251 28 100.0 32 ............................ CCTGAAAGATGGTTGACGCCAAAGTTAAACCT 51311 28 92.9 0 .....................C.....T | ========== ====== ====== ====== ============================ ================================= ================== 31 28 99.5 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AAGAATTGGCAGAAAAAGCAGGTGTGGAGGTTGTGATGGATCGCTGCCCTAAAATTGAAATTCCAAGATTGGGGCTGGAAAAGTAATATTTTCCAGCTTGCTATTTTGGTATTCCGTCAATGAATGAAAGGAGCTTGGCGTTAATATTTAAGTTACCAAACTAAATGGGTGGGAAACTGCGTCAGGCTCCGAATATGTAGATCATGTCTGAAATTAATGCTTAGCAGAATTCACTGCTCTAAAATCTAATTTATACATTTATTACAATATGTTAAAACGAATTTAGTTATTTCTGTGATTTCTAAATTCTGCCTAAATTTGTACTTACATTGACTAAGATATAGTGTTTCTGTCGTATCTTGGTTTTTGACCCTTTTTTAAGGGGCGATTTTAATTTATTGATTTTCAATGGAATATTATTTCTCTTGTAAAAAAGGGTTTTTTCGTTGTTTTATTAAAATATACTTTAACCGTCAGTAGGTTAAGGCTAATATGCAACA # Right flank : TATAATCACTCTCGTTCGGTAAAGGCCCATACTGTAAATTGGTAAAGAATTGTAAATTATTTCGATTTACATATATGATATTTCATCTTGTGTAAAATCTATGCATAATATTTATCATAAGTAAAATTAATTATTTGGGTGGTATTTATTATGGAAAACAGCTTTTCTCCAAGTGACCTCAAAACGATTTTGCATTCCAAACGCTCTAATACTTATTACCTGCAATATTGCAGAGTATTAATTAATGGTGGCTGTGTTGAATATATCACTGATGAGGGAAAACAATCACTGTATTGGAAATTTCGCCAACGCTGCATGAGTGGATTTCAAAAAGCAGATGCATTGGACACCATGATTGATGCTTTGCAAACAACCGCTCAACAACTGAGTCAGGAGGCACGATGAATATTCTCTTGGTATCTCAATGTAACAAACGCGCGCTAACAGAAACCCGCCGAATTCTGGATCAATTTGCTGAACGTAAAGGTGATAGAACCTGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 69582-70392 **** Predicted by CRISPRDetect 2.4 *** >NZ_LOMY01000095.1 Photorhabdus australis subsp. thailandensis strain PB68.1 Ppb6_contig000096, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 69582 28 100.0 32 ............................ ATGCAGGGCCTTGCTGCCGGTGTGGCTTTCTA 69642 28 100.0 32 ............................ CGTAATCAAACGTTTTAACTTCGGACTCCTCA 69702 28 100.0 32 ............................ ATCAACACAAGAAATTGACGAGATTCTGCAAC 69762 28 100.0 32 ............................ TTTGTAGCCAATTGCAACAGAAATCTCGACAC 69822 28 100.0 32 ............................ CACCACATTGCCGATACACCATGTCATAATAG 69882 28 100.0 32 ............................ GGTGACGTTATTGAGGCCGCCGTTAATCAATG 69942 28 100.0 32 ............................ ACGCCGACCAAACGAATGAAAGCGATATCAGT 70002 28 100.0 32 ............................ CAGACAAGCCACAATGAAAGGTATCGCTGATT 70062 28 100.0 32 ............................ AATAAACATCTTCTTTATTATCAGCTGTCCAA 70122 28 100.0 32 ............................ ATCAACACAAGAAATTGACGAGATTCTGCAAC 70182 28 100.0 32 ............................ TGTCATTAACGCCAGCATCCGATAATCGGGCT 70242 28 100.0 32 ............................ TTATCGTCATTCTCTTCGGCATCTGCATCATC 70302 28 92.9 35 ....................T......G CTTGGGATATGGCAAAATTGTATATAGAAGACTGC 70365 28 75.0 0 ..GT......A..T..AT.........T | ========== ====== ====== ====== ============================ =================================== ================== 14 28 97.7 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ATCTGTATCAACAAGACCTCTGTGTTCTCCATAATGTCCGGCAGTCATTAGTTCAAAAACGCGTTGCTCTCTCTAATCAAATCAGAGGACTGGCAGCAGAATATGGCATTATTTTTCCGCAACGCTCTGCGGCTCTTAGAGAGTCACTGTACGAGGCGCTTGAAGATGCCGATAGTGGATTAACGATGATTGCCGCAGGGTTCTGAAACAATTCTATGAAGAATGGCTGAAGCTGATCCAGCACAGAGGAAATAGAAGAAACCCTCAAGTCGCTATCATTGCAAACGGCTCAGTGGCAGCAACTCCAATCTATTCCCGGTAATCACACTAATACAAATTATATGATAGTATTTTGCTAAACCCTATTTTGACCCTTTTTTTGAGGTTGATTGTAACTAATTGATTTTATGGTGAAATTAATTGTCTCTTATAAAAAGGGTTTTTCACTTTTTAACAGTTATGCTATTTAAAAATCAGCAGGTTAAAGTTAATATGTAACA # Right flank : TATAATCACTCTCGTTCGGTAAAGGCTCTATACTGTAAATTAGTAAAGAATTGTAAATTATTTTGATTTACATGTGCGATATTTCACCTTATGTAAAATTTATGCATAATGTTTGCCATAAGTGAAATTAATTATTTAGGTAGTGCTTATTATGAATAACAGCTTTTCTCCAAGTGACCTGAAAACGATTTTGCATTCCAAACGCTCTAATATTTATTACCTGCAATATTGCAGAATATTAGTTAATGGTGGCCGTGTTGAATATGTCACTGATGAGGGAAGACAATCATTATATTGGAATATTCCAATTGCAAATACCACGGTAATTATGTTGGGAACGGGGACTTCTATTACTCAGGCAGCAATGCGTGAATTTGCTAAAGCAGGTGTTTTGGTCGGTTTTTGTGGTGGTGGCGGTACACCACTATTTACGGCTAATGAGGTTGAAGTTGATATATCTTGGCTGACACCACAAAGTGAATATCGACCTACTGAATATT # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //