Array 1 208995-201943 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUNK01000001.1 Schaalia hyovaginalis strain BSM-389-WT-23D seq1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 208994 28 100.0 33 ............................ CAGCGGGTCTAAGCCTGTGGATCTTGAGGTGCG 208933 28 100.0 33 ............................ GCCCTCAAGGACGCGGTGATCGAGGGGCACCTG 208872 28 100.0 33 ............................ GCGTGCGGGCTGGGATTCGCGGTCCTCAAGGAG 208811 28 100.0 33 ............................ CGTGATCGCCGATGAGGAGATGGGCTCGAAGAC 208750 28 100.0 33 ............................ GGCAGGGCCCAGATCAGCTCCGAATCAGTCCCA 208689 28 100.0 33 ............................ GGACCGGCAATCGTATGAGCATCACCGCGATGA 208628 28 100.0 33 ............................ TGGTCAAGGTTCCCTGGTGGTCGGTGGGGGCGC 208567 28 100.0 33 ............................ GAGCGGGCGGCCCGCGGTGTCCTTCTGTCCGAG 208506 28 100.0 33 ............................ GCGCTCGACCTCGAAATGATCCTCCAGGCCGTC 208445 28 100.0 33 ............................ GCTGAGATCCGCGCCGAAATGGCGAAGAGGAAC 208384 28 100.0 33 ............................ GGCGAGGATCGCGTCGAATCTGCATCGGTTGCA 208323 28 100.0 33 ............................ CTCGTCGGCAGGGCCCTCCCCGAGGGCGTGACC 208262 28 100.0 33 ............................ GATGGCGTTCGGGCCTGTCCAGTCGTATCTCAA 208201 28 100.0 33 ............................ CATGGCGAGCCTGGCCATCACGGCCACCGACTC 208140 28 100.0 33 ............................ GGCTGGGGTGTTCATCGGGGGCCTCCGATGGTG 208079 28 100.0 33 ............................ CCCTCCCATTTCGTCAACGACGCGGCGGAAGGC 208018 28 100.0 33 ............................ CCTGGCCAAGCGGCGCGCCCTGTACGCCCTGCG 207957 28 100.0 33 ............................ CGCGATGTGTTCAACGTCCTCGCGCCGATAGGC 207896 28 100.0 33 ............................ GCGTCAGAGTTGCGGTGGAGGGCTTGGGCTGGT 207835 28 100.0 33 ............................ GGCGTGGCAGGCGTGGTGGAACCGGTCGCGCAT 207774 28 100.0 33 ............................ CTCATGCGCGACGCCGCACGCCTCGGCGTCGCA 207713 28 100.0 33 ............................ GAACCTGATCTGATAGGAGAAGATCATGTCCGG 207652 28 100.0 33 ............................ GGGACCGTGACCTTCGGCGCCTGAGAGTTCGCC 207591 28 100.0 33 ............................ TCGTCCTCTCTGCACGGGACGCGCAACGGCAAT 207530 28 100.0 34 ............................ GGGGCAGCTCGATGCGGTCAAGCTCGCTGCCGAC 207468 28 100.0 33 ............................ TTCAAGGTCGCGGCGAAGAACGAGGCGATTCGC 207407 28 100.0 33 ............................ GGTTTTTCGTGACCTGATTCCGCGTCGCGCTCG 207346 28 100.0 33 ............................ CTTGTTCCCGAAAAACCGCTCGGCCTGCGCAGG 207285 28 100.0 33 ............................ GACCGGGAAGTTCACGAGCGAGGGCACGACGCG 207224 28 100.0 33 ............................ GCACTGAGGGTGGCGCGCTCCGCGTGGCGCACC 207163 28 100.0 33 ............................ CCCTCCCGGATCGATCGTCGGCGTCGGAAGCGG 207102 28 100.0 33 ............................ GATGTCTCGCAAATCACCGACGCCACCGTCAGG 207041 28 100.0 34 ............................ ATGGGACAAAATGAATGATCGGAGGCGCATTCGG 206979 28 100.0 33 ............................ GACGTTTCTCAAATCACCGACGCGACCGTCAGA 206918 28 100.0 34 ............................ GACGACAGCCTCGCCTTCTTCCCACCCGCTCGCC 206856 28 100.0 33 ............................ GCTCCTCGGAGCGTTCATGCGGTCTCCTCCTTC 206795 28 100.0 33 ............................ GTCGCTGACGGGCACGCCGCCGACGTATGCGGC 206734 28 100.0 33 ............................ GTCCAAGGGAAAGACCCTCGGCTTCATCCTGGC 206673 28 100.0 33 ............................ TCGCGGCCGCCCTCCTGCACGACTGGACGATCC 206612 28 100.0 33 ............................ CTGTCCTTGCGCGGACGCGGTCTGCTCGGTGAG 206551 28 100.0 33 ............................ GGGTCGTCTTGTTCCCTGCCACGGGGTTACCTC 206490 28 100.0 33 ............................ CGCGCTCGCCCCGATACTCACCACCACAACTCC 206429 28 100.0 33 ............................ TCCGTGACGAGCGACGACACTTCGACGCCAAAG 206368 28 100.0 33 ............................ TTGGGATGCCTGCGGCGCTGATTGCGCGGGCGA 206307 28 100.0 33 ............................ CCCTGAAAACATCGTGCTCAGACCTTGCCAGGC 206246 28 100.0 33 ............................ TGTGCTCAGGGAGTACACGGATTCCGAGGCACT 206185 28 100.0 33 ............................ CACCACGCACAATCCGAGAGATGGTGCATTGGT 206124 28 100.0 33 ............................ GTCAAGGCCATCATCTCGGCCGTAAAAGTCGCC 206063 28 100.0 33 ............................ TCCGACATCGCCCCCACCCTCGCAGCCGCCGCC 206002 28 100.0 33 ............................ GCCTCGGGTCTTTCGCGGCCTGGCGGGTCAGAG 205941 28 100.0 33 ............................ GGCCCTGGGCGCACAGAGCGCGGCGGACCAGGC 205880 28 100.0 33 ............................ TTCCGAGGTGCGTTCATGCACTCCCCTCCTTCG 205819 28 100.0 33 ............................ GCGCGCGAAAGAGACAACGACGCGCATCAAGCA 205758 28 100.0 33 ............................ CTCGGGGCGACTCATGATCCGCTCCGATCCCCG 205697 28 100.0 33 ............................ GATCCCCTACCCGCTGTCCACCGACAAGGTCGC 205636 28 100.0 33 ............................ CTTCGCGGCCTTGATGAGCTCGGGATGGGGCGC 205575 28 100.0 33 ............................ GCTTCTCGGAGCGTTCATGCGGTCTCCTCCTTC 205514 28 100.0 33 ............................ GTCCGGCGAGATGTTCTTCTCGTCGGCCATTCC 205453 28 100.0 33 ............................ GCGGCTGGCCGGGTCGGTGCAAACCGGTGGCGG 205392 28 100.0 33 ............................ GGCCGAGCGGAACCCATCGACGAGGCCCTGAAT 205331 28 100.0 33 ............................ GATCACTGGGCCCGTGGAGGCGTTGGCGCGTTG 205270 28 100.0 33 ............................ GACGACTCGCAAGCGAAAGTGAGGAGGTCGGCC 205209 28 100.0 33 ............................ CCCCATCGGCCCCATGTGGACCGCCCTCACGAC 205148 28 100.0 33 ............................ GGCGTCGGCGAGCTGATCCTGGTCCAGGCCCAT 205087 28 100.0 33 ............................ GCCGGGCCAAGACATGGGCTCTGCCCTGTTCGA 205026 28 100.0 33 ............................ CTCCTCGGCGCGGCGCAGATTCTCCTTCGACTG 204965 28 100.0 33 ............................ GCGTCGTCGTCATGATGCGCGCTCCATCACGTC 204904 28 100.0 33 ............................ CTCTCCCCCGCAAAGTCCGAAGCGATCGTCGCC 204843 28 100.0 33 ............................ CCGCGGTCCTCCTCCTGGACGCCACCACCCGGA 204782 28 100.0 33 ............................ GCTCGGTCCCGGCATCCTGAAGTTCGGCAAAGT 204721 28 100.0 33 ............................ CGCGTACGCCTGAGGAGTGTTCGCCGATCTCGC 204660 28 100.0 33 ............................ GGCCCCTCGGGTCGCCAAGCTCTCCGGCGCGCG 204599 27 96.4 33 .................-.......... TACCGCACAGTAGCCGCCAAACTCACCACGCGC 204539 28 100.0 33 ............................ CATGCTCGCCATTCGACAGACGAGCGACGATCG 204478 28 100.0 33 ............................ CCTGCAGTATGGGACGAGCCGGTCAGAGGCCAT 204417 28 100.0 33 ............................ GCGTCAATGCGGTCCTGCGACCAGCCGACCACG 204356 28 100.0 33 ............................ GGTCCTGAGCCAGGTCCTGGAGAGCTTGGATAA 204295 28 100.0 33 ............................ CGTCCCCTTCGGCGCAATCAACGTCCGTTGGCA 204234 28 100.0 33 ............................ GGACATCCAGGCGCTGACCCGCCAGGCCGTAGC 204173 28 100.0 33 ............................ GGTCATGCCTGAGGGGAGTTCACCGGTGCGCTT 204112 28 100.0 33 ............................ GGCCGACGCGCTGCAGAAGCTCGCTGGCGGCAA 204051 28 100.0 33 ............................ GGCGTTGGCTGTGCCCTGACCGGTGAAGGCGAG 203990 28 100.0 33 ............................ GCGGTTCGGTCACGCTGTCGCATCCTCTCCAGG 203929 28 100.0 33 ............................ GCTTGCACTGTCGGATGGGAACGGTTTGCGGAT 203868 28 100.0 34 ............................ ACTGGGGTCTTTGAGTCGTTTCTCTGCGGCTTCA 203806 28 100.0 33 ............................ GAAGCAGGAAGCCGAACGGATTGCCTCCGACGA 203745 28 100.0 34 ............................ TCCCAGCAGGGCGGGAAGGGGACAACGGCGCAGA 203683 28 100.0 33 ............................ GTTCCAGGGTTTGGACCAGTCGTCGGCGTATGC 203622 28 100.0 33 ............................ GGCCTGATCGACGACGCCCACAAAGTCGCCACC 203561 28 100.0 33 ............................ TCCCAGGCGCGGGGCGGTGGGGAGGCTGACGAG 203500 28 100.0 33 ............................ GCCGGTGGTGGTGTACTCGGCCAGGGATCTCCT 203439 28 100.0 33 ............................ GGCGGTCGTCACGGGTGCGATCGACATCGTGAG 203378 28 100.0 33 ............................ GATGCGGCAACTGCGCAGGCAGAGTCGCTAGAC 203317 28 100.0 33 ............................ GTCTCCATCACCGCCGACACGCGAAAAGCACAG 203256 28 100.0 33 ............................ TCGGTCCTCTGTGACTGGATCGAGGCCGCACGG 203195 28 100.0 33 ............................ GACGGCGAAACCCTGTACAGCCTCAACACGTGG 203134 28 100.0 33 ............................ GGTGTGGGAGAACGCAGGCAAGACCGTCGACTT 203073 28 96.4 33 ................C........... GGCGGCGTACTGGTAGACGCTGAACGCCTGGGT 203012 28 96.4 33 ................C........... GGCGTTGCCGAGGCTGCGGATTTCGTTGGCTTC 202951 28 96.4 33 ................C........... CACGATCCGCTGGTAGGGGCGCGGGTCCAGGGG 202890 28 96.4 33 ................C........... GATCGGCGAGCGTGAATTTGACGCGTACTGGGG 202829 28 96.4 34 ................C........... ACTGCGTCGGGTTGATCGCCGTCTCAAGGGCAAG 202767 28 92.9 33 ...T............C........... GCTCGTCTCTGCGGCAAAACCGCTCGCTGCGGG 202706 28 96.4 33 ................C........... GTCCACGAGGCCCGCACCGCTGGCCTCTTCGGC 202645 28 96.4 33 ................C........... GGTGTCGCCGGACAGGCCGAGGCGGGTATTGAG 202584 28 96.4 33 ................C........... GCCGGGGGAGTTGCGCCACGCGTCCCCGCGCGT 202523 28 96.4 33 ................C........... GTCCGTGGTGTTGGTTTTGCCGGGATCTCCGCC 202462 28 96.4 33 ................C........... GGAGGATGTATCTCAGCGTCGTCGAGGGCGACG 202401 28 96.4 33 ................C........... CGAGGTCGACACGATCCCCTCGGGCAGGATCAG 202340 28 96.4 33 ................C........... CGCGGGCGCTCGCCTGCACAGATCCACCCTGCG 202279 28 96.4 34 ................C........... ACTGCGTCGGGTTGATCGCCGTCTCAAGGGCAAG G [202257] 202216 28 96.4 33 ................C........... GGTGTCGCCGGACAGGCCGAGGCGGGTATTGAG 202155 28 96.4 33 ................C........... GCCGGGGGAGTTGCGCCACGCGTCCCCGCGCGT 202094 27 92.9 33 ................C....-...... CTGTCTCGATGTCGCCGCCGACCTGGTCACCCA 202034 28 78.6 35 ...........C..TAC....AC..... TCAGAGGGCACACATCCTGCGGAGCGCGTGTTCGT 201971 28 75.0 0 ........G..C..T....CTC.....G | C [201954] ========== ====== ====== ====== ============================ =================================== ================== 116 28 99.0 33 GTGCTCCCCGCGTAGGTGGGGGTGATCC # Left flank : ATGATTTGCGCCTATGGGACGAGGTCCAGGGGTTCGTCCCATCGGGAATCTCATATGCCGAACGGTGAATCGTGATGATCGTTCTCGTTCTGTCGGCGGTGCCAGAAGGTCTTCGTGGGCATGTCAGTCGCTGGCTTCTCGAGATATCGCCGGGGGTTTTCGTCGGTCGTGTGAACGCTCGGGTGCGAGAACGCTTGTGGGAATCGGTGAAAACCCATATTGGCGGCGGTCGAGCAGTTCTCGTCTTTCATGCGGCCAATGAACAGGGCCTCTCTTTCTTGACGCTTGGAGATGCGTGGGAGCCGGCAGATTTCGAGGGGCTGACCTTGATGGTCCGACCAAACACCGTGGATACGACAATCGCTCCTGAACTTCGACGGGATGCGATGAGTCAGGGAAAAGGGCGTCGTGCCATGAGTGACTTCGAAAGGCGAAGAAGGTCGCGGCTCGGCTTCCCAAGATCTGATCGAGCGATGGGGTAATGTCGCTGATCAGGAAGC # Right flank : AGCAGATGCCCCCGGCTCGGCAGTCGCGCTCCCCGTAACCGAGGGCTATTCACCTTGCTAAAAGGCTCGCATGAGGGTGATCGCATCGGAGTCTTCTATGTCTTAGAAAGCGGGCTGGAGAGAGGGAGTCACGTGACATCATGTGACCACTACGAAATCGATGAACCAGAGGACTGGGATCGTCCGACTCCTCCGCGTGTCCGCCAGGCGAGCCGCTATGTCGATGGGAGTGCGGTTATCGGCGAAATCAACGTCACCTTCGATCGCAAGACGTCCTACAACCTGTTCCCCGATTTTCTTCACGCCTTCACACAAGGGCAGATCGACTTCATTCGTGAGGAGCTGCCGTTCTGGTACGCCTTCTTCAAGTCCCGCATCACCTTGTGAATGCGAGCCCCGCGGGGCTTTCGGCCCTGTCGTCGGCGCTTCGGATCGGCCCTCCGACACGAGAGGATGAGAACGCCCCTCAACGAGTTCCAGAATGGCATTTCCATTCTCCG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTAGGTGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGTAGGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [19-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //