Array 1 522224-527991 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP024185.2 Moraxella osloensis strain TT16 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================================== ================== 522224 36 100.0 33 .................................... GTAGAAAGCAAACTCACCAGTGTTGCCACCGAT 522293 36 100.0 33 .................................... ACAAATGGCTCTGAGAGCTTGTATTTGGCTTTC 522362 36 100.0 34 .................................... TCATATTTAACCTCTACCTTAGCCATATCGCCGA 522432 36 100.0 34 .................................... ACTTATTTCATAATCCCCATCGCGGTTGGTAAAG 522502 36 100.0 34 .................................... TGTAGCAGTTGTTACTTTTACATTATTTGCTTTT 522572 36 100.0 33 .................................... AAGTACACACGACCGTAAATCTCAGGGTCATGG 522641 36 100.0 32 .................................... GAATGACTCACATTTTGTATAAGCGTCTTGGA 522709 36 100.0 33 .................................... GTACGGTTGTTTCAGTATTTTTAACACGGTAAA 522778 35 86.1 54 .........................T..-G.G...G CGGATTAGCAAAGCACCGCTTTGCCCGCTCGCAAGATTGAAACTCACTTAACGT 522867 36 83.3 35 .AAG.C.A.T.......................... GCACCAGCATTTAAATCATCCGGCAAGGTGGTAAC A [522877] 522939 36 100.0 34 .................................... GCCCAATTGTCAAACCAACCTGCATTAAAATCTA 523009 36 100.0 35 .................................... CATCACTGTACAATTTTTAAATCCAAACTTTTCGA 523080 36 100.0 34 .................................... TGAAAGAGTACAGTTTTAAAAACACCTACGTTCG 523150 36 100.0 32 .................................... GTACGTATTGTTGATAAGAATTCCCCGGGTCG 523218 36 100.0 33 .................................... GTACGGTTGTTTCAGTATTTTTAACACGGTAAA 523287 36 100.0 33 .................................... AAGTACACACGACCGTAAATCTCAGGGTCATGG 523356 36 100.0 34 .................................... TCCTTATACAATGAAAGAGAAAAAGAAGTTCAAA 523426 36 100.0 33 .................................... ACTTCCTTGCAAGCTTCTGTTAAAGAGTCTGCA 523495 36 100.0 35 .................................... TTAGAGCAACCCACTTGGGCTGCTACTAATAAAAT 523566 36 100.0 34 .................................... ATAAGGACAGTATATTTATAGACCCCTGTCCAGG 523636 36 100.0 33 .................................... CCTTAACTCATCAGGTGTCTGTTCTTTTCTGTG 523705 36 100.0 34 .................................... GAAATGTCTGTACCTCCACCGCCTTTCATCTTAA 523775 36 100.0 34 .................................... GTCTTCCACTGATACAAGTCCAGACGCGATTAAA 523845 36 100.0 34 .................................... GTACGAGGCATTGTGCCTCGAGAAATGATGCACA 523915 36 100.0 34 .................................... TTATTGCTGTCTGACGCATACAAGCCAAGTTGCA 523985 36 100.0 35 .................................... GTTGTGCATGTGCTTCTAATGTCCATAGAGGTGTT 524056 36 100.0 34 .................................... CCATCAGAACCACCTTGAGCATAAACGATAGAGT 524126 36 100.0 34 .................................... GTGATGACGTAGTTGATTGCAATTAACTGGTGAG 524196 36 100.0 36 .................................... ATACTGAATGCTACAGGATTTTCTACAACATCTGTA 524268 36 100.0 35 .................................... ACAGCCTGCAGCTGCTGCAATTAAAAGAATGTCAA 524339 36 100.0 34 .................................... GTAATATCGGTTACGTGACCCCAATTACCTTGCC 524409 36 100.0 36 .................................... AATTGTACGAGTACCAAGCTTCTGAAGATACATCTA 524481 36 100.0 34 .................................... AGCCAGTGTCAACAAATCTAACTAAAACCTTTGA 524551 36 100.0 34 .................................... GGTATCACTTGCAGTTCCGAGTGACATTTGTACA 524621 36 100.0 34 .................................... GAATTTAGCGGTAAATTTTAACATGGTATATGCT 524691 36 100.0 34 .................................... CGTGAGTAGGTTTGTCTTTACCGTTTGCAGATGA 524761 36 100.0 34 .................................... TGCATGACAGGAATTTGAACATAATGTCCATCAG 524831 36 100.0 32 .................................... TTATTAGTATCGTTATCCCCGTACTCTTCTTT 524899 36 100.0 35 .................................... TCCTGAGTTTCCTCCAAGTGTACATTTTCCTTGGC 524970 36 100.0 34 .................................... GGTCCAGACCCGCTTTTTGTGCAGTGTTGATGAT 525040 36 100.0 33 .................................... CCGTCACCACTTAAATACTTATCGGTTCTTTTA 525109 36 100.0 34 .................................... TGCTGCTCAATGTATTGTAGGAATTCGTCTGCTG 525179 36 100.0 35 .................................... TGCCGTTTCTGCTGGAGCAGCAGCGGAGGTGTTAT 525250 36 100.0 32 .................................... GTGTAAAAGATAAGTAGTGCTATCTCTGTGCG 525318 36 100.0 34 .................................... GTCCACCACCCAGCTTCCTTAACTAAACGTTCAT 525388 36 100.0 33 .................................... GTTAGACTCTACTCCATATGCTTGCGCAAATAG 525457 35 86.1 54 .........................T..-G.G...G CGGATTAGCAAAGCACCGCTTTGCCCGCTCGCAAGATTGAAACTCACTTAACGT 525546 36 83.3 33 .AAG.C.A.T.......................... TTGCTCATGCAAGAACGTATGTTGTTATTTTCA A [525556] 525616 36 100.0 34 .................................... TGGTGAAAGATGACGAAAAGCGTCTTCCAACAAA 525686 35 83.3 54 ...G.....................T..-G.G...G CGGATTAGCAAAGCACCGCTTTGCCCGCTCGCAAGATTGAAACTCACTTAACGT 525775 36 83.3 34 .AAG.C.A.T.......................... GGTTGGTTTGATTTCTTCTTCACGCATATAGTCA A [525785] 525846 36 100.0 33 .................................... CATCACGAGTAACAGTCATACCTTCTTTTAGTT 525915 35 86.1 54 .........................T..-G.G...G CGGATTAGCAAAGCACTGCTTTGCCCGCTCGCAAGATTGAAACTCACTTAACGT 526004 36 83.3 35 .AAG.C.A.T.......................... AACACATCAGCCGTCTGAGTAGCTGTACCAAAGAT A [526014] 526076 35 86.1 54 .........................T..-G.G...G CGGATTAGCAAAGCACTGCTTTGCCCGCTCGCAAGATTGAAACTCACTTAACGT 526165 36 83.3 35 .AAG.C.A.T.......................... AACACATCAGCCGTCTGAGTAGCTGTACCAAAGAT A [526175] 526237 35 86.1 54 .........................T..-G.G...G CGGATTAGCAAAGCACCGCTTTGCCCGCTCGCAAGATTGAAATTCACTTAACGT 526326 36 83.3 34 .AAG.C.A.T.......................... TCACTAAATGCTAATGATGTATATTTCTCACTAT A [526336] 526397 36 100.0 33 .................................... TTACTACCCTAACTTGAGGAGTACCTTCATAGT 526466 36 100.0 36 .................................... TGCGTTAGATTCACCAGCACGTGTGATGTACTGATA 526538 36 83.3 53 .........................T..G.G.GAG. GGATTAGCAAAGCACCGCTTTGCCCGCTCGCAAGATTGAAACTCACTTAACGT 526627 36 83.3 32 .AAG.C.A.T.......................... GCGAACACGGGTAGCCTTAGCTTGGTCAAGAC A [526637] 526696 36 97.2 35 ...........C........................ TCAGTTGCGTTACCAGCTTTGATGACTCGGATAGG 526767 35 86.1 54 .........................T..-G.G...G CGGGTTAGCAAAGCACCGCTTTGCCCGCTCGCAAGATTGAAACTCACTTAACGT 526856 36 83.3 32 .AAG.C.A.T.......................... CATTGGGCTGGATTTTGTTTACGGCTGTTTTC A [526866] 526925 36 100.0 34 .................................... AATAGTTTTGAGTAGTTTTTAATGAGCAGTACCG 526995 36 100.0 34 .................................... CCAGGTTTAGCATCCATATACCCATATTGGAAAT 527065 35 86.1 54 .........................T..-G.G...G CGTATTAGCAAAGCACCGCTTTGCCCGCTCGCAAGATTGAAACTCACTTAACGT 527154 36 77.8 32 .AAG.C.A.T....T..........C.......... TGTTTTTTAAGCTCGCAGATATGTGCGCCCAA A [527164] 527223 36 97.2 33 ............T....................... CTTAGCATGTCCCTCTGCCTTCCACTTAGAGAC 527292 36 100.0 34 .................................... CCACCTAGGACAGTGAAACCAGCCTCACGAACTT 527362 35 86.1 54 .........................T..-G.G...G CGGATTAGCAAAGCACCGCTTTGCCCGCTCGCAAGATTGAAACTCACTTAACGT 527451 36 83.3 34 .AAG.C.A.T.......................... TCTGTCAGCAGGTTTTCTTTTAGGTCTTGTTTGA A [527461] 527522 36 100.0 33 .................................... TCATCTAACATATTCCAAGCGGTTTTTGTTTTG 527591 36 100.0 33 .................................... CGTAGCAAATTGATTGGTTTATAGTCATCATTG 527660 36 100.0 32 .................................... CGCATTTTACTAGCAGCATCAGAATAAACTTC 527728 36 100.0 33 .................................... GTTTATGGGTAGAAGTGGTTTTTACAGTTTTCA 527797 35 86.1 54 .........................T..-G.G...G CGGATTAGCAAAGCACCGCTTTGCCCGCTCGCAAGATTGAAACTCACTTAACGT 527886 36 83.3 33 .AAG.C.A.T.......................... ATAATCTTGAGGTACTTTGTAATCATGGTTTTC A [527896] 527956 36 77.8 0 ...............T..C.T....T..G.G.G.G. | ========== ====== ====== ====== ==================================== ====================================================== ================== 80 36 95.3 37 GTTCAAAGCCTTCCCCGATTCCTAGGGGATTAAGAC # Left flank : CAAGTTTATTCAAGTTGTCGAATCGGTCAAAGATACGTCTGCAGACCGATTTAACGATAAGGTCGATTCGGCATTGGCGATATTTATGGGCGTTTAGTAGACAAAATTTCTTATTCTTTGTTAACCTTTTGGAGATGTTGCGATGTATATGGATCCTGTCAAACCATTTGCTTTTATGATTATTTCTTTTTTTTTGGGGGCGTTGCCATTTACGGCTTTGTTTTTTATTTGGTGGATAGTGGTGTTAGTTAATAACGTAAGTGTTGGAAAATAGGGAGGTTTTTGCTATAATAGGACTCGCTATTTTTTATATTGGCAGTCTTTAGAGACAGATTGTTAAAAGTTTTGAGCTTACTTGATGAAAGTGGTTGCGATTATATTCGCCTTGTACTGTATAAAAACAAAAATTGGTCAAAAAATCACCAACTTTTTAGTTGAATTTTGTTTGTCAAAATAAGTTTTTAACTGGTTGTTTTTATTGATAAATAAAAATAAGTGCA # Right flank : CTATTTCCATTTGTCCAAAATTCACCAAAACACCCTAAAATCCCCATTCATCTAATGAAAATCCCGCCAAATTCTGCTACTGTGTTGAGTAATTATCCCATCACTTTCAACCATTAGCATCTTGCCATGACCACCAATAACGCAGCCTACCAGTCCAATCAAACGACCAACACCGCCAATCAGCACCCCGAACAGCGAGCAAGGGACAATATCGACCGCTTGCTTGAGCAATCTGGCTGGATTGTCCAAGACATGAAGGCTTTTAACCCAACGGCAGGGCTGGCAAGTTTTCGAGCGGTGTTAAGTGAGTTAGAAAATTAAAATACATACCTATTGAAATATAAGGAAATTAGCATGACCATTATGCAACACTCAAGTAAAGCCCAAGACCGTACATTGGGCGTTTGGTATCAAAATATTGAGCAAGGCTCAGTAAAGTTACCAAGATTTCAGCGTTTTGAAGCGTGGGATAGAAGTCGTATTACCAGTTTTTTAAATAC # Questionable array : NO Score: 2.94 # Score Detail : 1:0, 2:0, 3:0, 4:0.76, 5:0, 6:0.25, 7:-0.07, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAAAGCCTTCCCCGATTCCTAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.40,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [13-117] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 2 2084811-2089461 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP024185.2 Moraxella osloensis strain TT16 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2084811 28 100.0 32 ............................ ATAATGGGGCATATAGCGGAACCCGATACGCT 2084871 28 100.0 32 ............................ GTGAAAAGTACGTTACCGAGGATGACGGCTTT 2084931 28 100.0 32 ............................ AATGACGAACATTGACTATCACTTGCAACAAG 2084991 28 100.0 32 ............................ ATAAGCGCGATACAACTTGGCACGTACAGGGT 2085051 28 100.0 32 ............................ CTGCTTTGATTAGCCACCATCACCGATTATCA 2085111 28 100.0 32 ............................ TTGTAGCGACTGCCAGTCATTAAAAAACTTGA 2085171 28 100.0 32 ............................ TGGAGCATGCGCTAGCAGGAGCAACCGCCAAG 2085231 28 100.0 32 ............................ CCTATCGTTGCCGCCAGTGTCCCTGCTTCAAC 2085291 28 100.0 32 ............................ CAAAGCACCAACAGCAGCAAGACCATAACCGA 2085351 28 100.0 32 ............................ GACAGATAAAGACGTTGAGGGAGTTGCAGGAC 2085411 28 100.0 32 ............................ TTTAGGTGTAAGTTTATCTTTATCTAAATTGA 2085471 28 100.0 32 ............................ ATAACGAGTAGCGGTCTCAACGTAGCTGCCAA 2085531 28 100.0 32 ............................ AATACACGGTAACAGTTTTTTTCTTTCGAGGG 2085591 28 100.0 32 ............................ AATCAAGAGCAGTTAAACCAATACCAGTAATT 2085651 28 100.0 32 ............................ GTCAAGATTAAAGCCCGCGGTAGTAATGGCAA 2085711 28 100.0 32 ............................ AAATTCATGGTCAATCGCTTGACCCTGTTTGT 2085771 28 100.0 33 ............................ AGATAATACTTTGATTACAAGCGTCCGCTGCTG 2085832 28 100.0 32 ............................ CAAGTCTGCGCGCTGACGACATCATCTATGAT 2085892 28 100.0 32 ............................ ATAAGCGGCGACCGTAGTTATCACAGCGGCGA 2085952 28 100.0 32 ............................ ATCCGCGCCGTCACAAGCAATGCGGTGATGAT 2086012 28 100.0 32 ............................ TTTACGTCCACAAGCCGATATTTTTACCCAGC 2086072 28 100.0 32 ............................ ATCCAGTGCGCAAGCTCTTCGATATCCATCGA 2086132 28 100.0 32 ............................ TGTTTCATCAGGGGTTTTACCAGCAATTAAAG 2086192 28 100.0 32 ............................ TGTCAAATCAGATGCCGAAATCTACCGAGACA 2086252 28 100.0 32 ............................ CACAGCGCGGTGAGAAATCACCCGCCACCAGC 2086312 28 100.0 32 ............................ TTGCGTGCCAAAGCGCGTGCCGAGCTTGCAAG 2086372 28 100.0 32 ............................ GCGGGCTCAAGATATACATCACTACCCTTACC 2086432 28 100.0 32 ............................ AATATAAACGACCCAAGTCGCAAAATCGGTAT 2086492 28 100.0 32 ............................ AAGCCCAACTTGCAGGGGCAACCAGTGCGGGA 2086552 28 100.0 32 ............................ AACTTTGTTGTCGTTATCAACGTGAACGCTAC 2086612 28 100.0 32 ............................ GATGTGTGCGACCAAATGGATTTAGCAGAGCT 2086672 28 100.0 32 ............................ CATCTCGGTAGTGAGCCTAATAAGCATAGTGG 2086732 28 100.0 32 ............................ TACGCCACTGGCAAACAGGGCAATACCTAACA 2086792 28 100.0 32 ............................ CCTTGCAAACCGTCTTGGGTGGTCGGCAAACT 2086852 28 100.0 32 ............................ GCCGCCGTCACGTTCTATCAGACTTCGACGCA 2086912 28 100.0 32 ............................ CCAAAAATAAGCCAATGCCTTTTTTTGACCGT 2086972 28 100.0 32 ............................ TGTTTCATCAGGGGTTTTACCAGCAATTAAAG 2087032 28 100.0 32 ............................ TGTCAAATCAGATGCCGAAATCTACCGAGACA 2087092 28 100.0 32 ............................ CACAGCGCGGTGAGAAATCACCCGCCACCAGC 2087152 28 100.0 32 ............................ TTGCGTGCCAAAGCGCGTGCCGAGCTTGCAAG 2087212 28 100.0 32 ............................ GCGGGCTCAAGATATACATCACTACCCTTACC 2087272 28 100.0 32 ............................ AATATAAACGACCCAAGTCGCAAAATCGGTAT 2087332 28 100.0 32 ............................ AAGCCCAACTTGCAGGGGCAACCAGTGCGGGA 2087392 28 100.0 32 ............................ AACTTTGTTGTCGTTATCAACGTGAACGCTAC 2087452 28 100.0 32 ............................ GATGTGTGCGACCAAATGGATTTAGCAGAGCT 2087512 28 100.0 32 ............................ CATCTCGGTAGTGAGCCTAATAAGCATAGTGG 2087572 28 100.0 33 ............................ CCTGAAAGAGCAAAGGGCACAGCCCTTTGCATT 2087633 28 100.0 32 ............................ TCACCGTCATCAATAATATTGGCGTTAATAAT 2087693 28 100.0 32 ............................ AAACTAAAAATGATGGCAGCCATTGCCACCGC 2087753 28 100.0 32 ............................ AAAGCGGACGCTCAAATACAGGAGCACCGCAA 2087813 28 100.0 32 ............................ TGTCGACGTGGGTGGTTTTACCATTCGTGAGT 2087873 28 100.0 32 ............................ TTAGAAGTCCCAGCTTTTTTTTGTGGCTGTTC 2087933 28 100.0 32 ............................ ATCAGCCTTTTTTATTATTCCTTGATTATTTC 2087993 28 100.0 32 ............................ ACGCCGCCGCCGTTGCCGGTGTATTTGGCAAG 2088053 28 100.0 32 ............................ TAGCGCATTGCGAAAAGCAGGGTTTAAGCCAG 2088113 28 100.0 32 ............................ ATGATTGTATGCTGCATCGACAAGCTGCCAAG 2088173 28 100.0 32 ............................ CAATGCCGCCCAGCACACTGAAAATCCACACT 2088233 28 100.0 33 ............................ ATAGCTGCGACTGCTGCCAGTGTCTGATTGCCA 2088294 28 100.0 32 ............................ ATATATGCTGCGCTTCGGGCTTGTCAAATGCC 2088354 28 100.0 32 ............................ AGTCACAGCAACAACAACTGCTACTACTGCCG 2088414 28 100.0 32 ............................ ATTTTCGCCATAGGTTACTTCTGTAGCAATAA 2088474 28 100.0 32 ............................ TTGCCAGTTTTTGAGTGCTGCATCGTGTCAGT 2088534 28 100.0 32 ............................ AATAAATGAGGTAGTAACCCATGTCTGACCAA 2088594 28 100.0 32 ............................ ACTATCGTTTGTCGTGAAGGTCTAAATACCTC 2088654 28 100.0 32 ............................ AGCGTCATTAGCCACTTGTTGTACGCCAGTGC 2088714 28 100.0 32 ............................ ACCAGAAAAACCAACACAGCAAGGCGAACAAC 2088774 28 100.0 32 ............................ TTGCCGTTTGATTGTCTGATTGCGCTAACTTC 2088834 28 100.0 32 ............................ TAGCCGATAACAGCGTTAATATACAAGATATC 2088894 28 100.0 32 ............................ TTCTTGATATTTAAATAATTCGATTTTTAAAT 2088954 28 100.0 32 ............................ TTTGACAATATTGTTTGTCGTGATTAAAAATT 2089014 28 100.0 32 ............................ GATTGTTAGCTTACAAAATGCCCGATATTCTT 2089074 28 100.0 32 ............................ CATGACTAAGGCTGTAAAATTTGGCATATCGA 2089134 28 100.0 32 ............................ AGCAGGTGTGCCAACTATCGGCTATGGCGCGA 2089194 28 100.0 32 ............................ TACTGCATCATCAAGGTCAAAGCAAACGGCTA 2089254 28 100.0 32 ............................ TTTGCTTTGGGTGAGCCGATTAACTTGTAAAC 2089314 28 96.4 32 ...........G................ TGTATCGTAGGGCTTACGGCTTTGCGTGTCGC 2089374 28 100.0 32 ............................ ACTTGGCAATATTAATCTAGGCAACAAAAAAG 2089434 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 78 28 100.0 32 GTTCGCCATCGCATAGATGGTTTAGAAA # Left flank : TCGCTGGGCAAAGGTATTATATAAAAGCTTGGCGGAAGGCTGTGGCTTTAAATTTACCCGCGAGGAAGGCAAAAATGCCAATGATGATATCGCCGATATCGCCAATAGCTACCTTGACCACGGGAATTATATCGCTTATGGCTATGCGGCAGTTGCATTACATGGGTTAGGTATTAGCTTTGCTCTACCGATGCTACATGGTAAAACCCGCCGTGGTGGTTTGGTGTTTGATGTAGCAGATTTGGTCAAAGATGCGATGGTGATGCCACAAGCATTTATTTCGGCAAAACTGGGGCATAATCAAAAAGAGTTTCGGATGCAACTTATCGAGATTTGCCAAGACCAAGATGTGTTAGATTATATGTTTGGCTTCGTTGTAGACACTTGCCAAAAAATTAAATAAAATCAGCTGCTTATAAAAAGCACTTTAAAACGAAGTGTCTTGACTGAATTAAAACGTATATAATTGATATCTGGGGATTTTGTCAGAAAATTCTCCA # Right flank : ACATGAGTTTGATTGATATTGTTCATGCACCCTACTAAATTTTTCTAGTATATATCTACTTTGCATTTTTTTCGTCAATATTTCTCATTTTTATACGAGATAGTCCTAATCTAAAGTTAAGGTAAGCAATTTAATATATTGAATTTTTGCTTATGTATTATTTTATTAGTATGTGGATTTAGAGTCGTACCGTGAAAACTCAAAACTTTATATAGTCCGTATAACAACTTTTGTATCTATTTTTCCAATCTCAAGACGGTTAACTAAACTAGTGTGTCAATGTCTTAAAGTCTCTAATAGCCATGTTTTTAATTTGGAGGGAATAACTTTGAAAGGATTTTTTTTAGGACATGAAGGCTATTTAAAATAAGCAATGAAAATCAAAAAAAATTCAGTTTCATCTCTTTTAAATTTGAGTGGGGGTGAAAACCTACTTGCTCAAAAATTAACCAAGGCACAATTTGGGCACAAAATGGGCACACAAGATTTTTAAGCGATTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCCATCGCATAGATGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCGCCATCGCATAGATGGTTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.20,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //